RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, humanhuman

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-208ENST00000542832 HOXC9P31274 260 aa11.69□□□□□ -0.54
DDX47-208ENST00000542832 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
DDX47-208ENST00000542832 PDE3BQ13370 1112 aa11.69□□□□□ -0.54
DDX47-208ENST00000542832 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
DDX47-208ENST00000542832 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
DDX47-208ENST00000542832 BLMP54132 1417 aaPredicted RBP11.69□□□□□ -0.54
DDX47-208ENST00000542832 ALS2Q96Q42 1657 aa11.68□□□□□ -0.54
DDX47-208ENST00000542832 MAP2P11137 1827 aaKnown RBP11.68□□□□□ -0.54
DDX47-208ENST00000542832 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
DDX47-208ENST00000542832 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
DDX47-208ENST00000542832 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
DDX47-208ENST00000542832 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
DDX47-208ENST00000542832 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
DDX47-208ENST00000542832 ABCC6O95255 1503 aa11.68□□□□□ -0.54
DDX47-208ENST00000542832 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
DDX47-208ENST00000542832 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
DDX47-208ENST00000542832 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
DDX47-208ENST00000542832 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
DDX47-208ENST00000542832 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
DDX47-208ENST00000542832 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
DDX47-208ENST00000542832 PSEN1P49768 467 aa11.66□□□□□ -0.54
DDX47-208ENST00000542832 EIF4A2Q14240 407 aaKnown RBP11.66□□□□□ -0.54
DDX47-208ENST00000542832 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
DDX47-208ENST00000542832 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
DDX47-208ENST00000542832 FBLN1P23142 703 aa11.65□□□□□ -0.54
DDX47-208ENST00000542832 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
DDX47-208ENST00000542832 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
DDX47-208ENST00000542832 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
DDX47-208ENST00000542832 NFAT5O94916 1531 aa11.65□□□□□ -0.55
DDX47-208ENST00000542832 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
DDX47-208ENST00000542832 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX47-208ENST00000542832 MKRN3Q13064 507 aaKnown RBP11.64□□□□□ -0.55
DDX47-208ENST00000542832 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
DDX47-208ENST00000542832 KDRP35968 1356 aa11.64□□□□□ -0.55
DDX47-208ENST00000542832 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
DDX47-208ENST00000542832 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
DDX47-208ENST00000542832 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
DDX47-208ENST00000542832 SPATA31A6Q5VVP1 1343 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
DDX47-208ENST00000542832 ST18O60284 1047 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
DDX47-208ENST00000542832 PIP4K2BP78356 416 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 EYA1Q99502 592 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.55
DDX47-208ENST00000542832 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
DDX47-208ENST00000542832 JCADQ9P266 1359 aa11.62□□□□□ -0.55
DDX47-208ENST00000542832 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
DDX47-208ENST00000542832 LMOD3Q0VAK6 560 aa11.61□□□□□ -0.55
DDX47-208ENST00000542832 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
DDX47-208ENST00000542832 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
DDX47-208ENST00000542832 TCP11L2Q8N4U5 519 aa11.61□□□□□ -0.55
DDX47-208ENST00000542832 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
DDX47-208ENST00000542832 ERBB3P21860 1342 aa11.6□□□□□ -0.55
DDX47-208ENST00000542832 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
DDX47-208ENST00000542832 APAF1O14727 1248 aa11.6□□□□□ -0.55
DDX47-208ENST00000542832 SOX12O15370 315 aa11.6□□□□□ -0.55
DDX47-208ENST00000542832 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
DDX47-208ENST00000542832 SULT6B1Q6IMI4 303 aa11.6□□□□□ -0.55
DDX47-208ENST00000542832 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
DDX47-208ENST00000542832 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
DDX47-208ENST00000542832 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
DDX47-208ENST00000542832 TMPOP42166 694 aaKnown RBP11.59□□□□□ -0.55
DDX47-208ENST00000542832 CABLES1Q8TDN4 633 aa11.59□□□□□ -0.55
DDX47-208ENST00000542832 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
DDX47-208ENST00000542832 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
DDX47-208ENST00000542832 IL16Q14005 1332 aa11.59□□□□□ -0.55
DDX47-208ENST00000542832 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
DDX47-208ENST00000542832 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
DDX47-208ENST00000542832 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
DDX47-208ENST00000542832 WDR17Q8IZU2 1322 aa11.58□□□□□ -0.56
DDX47-208ENST00000542832 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
DDX47-208ENST00000542832 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
DDX47-208ENST00000542832 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
DDX47-208ENST00000542832 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
DDX47-208ENST00000542832 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
DDX47-208ENST00000542832 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
DDX47-208ENST00000542832 YTHDC1Q96MU7 727 aaKnown RBP11.57□□□□□ -0.56
DDX47-208ENST00000542832 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
DDX47-208ENST00000542832 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
DDX47-208ENST00000542832 SHPRHQ149N8 1683 aa11.56□□□□□ -0.56
DDX47-208ENST00000542832 EVA1CP58658 441 aa11.56□□□□□ -0.56
DDX47-208ENST00000542832 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
DDX47-208ENST00000542832 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
DDX47-208ENST00000542832 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
DDX47-208ENST00000542832 BABAM1Q9NWV8 329 aa11.56□□□□□ -0.56
DDX47-208ENST00000542832 THRAP3Q9Y2W1 955 aaKnown RBP11.56□□□□□ -0.56
DDX47-208ENST00000542832 PHLPP1O60346 1717 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 E9PSI1 815 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 HMOX1P09601 288 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 RIPK4P57078 832 aa11.55□□□□□ -0.56
DDX47-208ENST00000542832 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
DDX47-208ENST00000542832 SNPHO15079 494 aa11.54□□□□□ -0.56
DDX47-208ENST00000542832 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
DDX47-208ENST00000542832 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
DDX47-208ENST00000542832 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
DDX47-208ENST00000542832 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms