RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
SFSWAP-211ENST00000542813 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
SFSWAP-211ENST00000542813 EPS8L1Q8TE68 723 aa6.28□□□□□ -1.4
SFSWAP-211ENST00000542813 NR3C2P08235 984 aa6.27□□□□□ -1.41
SFSWAP-211ENST00000542813 GRM5P41594 1212 aa6.27□□□□□ -1.41
SFSWAP-211ENST00000542813 ITPKCQ96DU7 683 aa6.27□□□□□ -1.41
SFSWAP-211ENST00000542813 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
SFSWAP-211ENST00000542813 ATP9BO43861 1147 aa6.26□□□□□ -1.41
SFSWAP-211ENST00000542813 VSIG8P0DPA2 414 aa6.26□□□□□ -1.41
SFSWAP-211ENST00000542813 NBPF14Q5TI25 921 aa6.26□□□□□ -1.41
SFSWAP-211ENST00000542813 PNMA1Q8ND90 353 aa6.26□□□□□ -1.41
SFSWAP-211ENST00000542813 C1QTNF2Q9BXJ5 285 aa6.26□□□□□ -1.41
SFSWAP-211ENST00000542813 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 SOBPA7XYQ1 873 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 MAN1A2O60476 641 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 UPP2O95045 317 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 EIF4G2P78344 907 aaKnown RBP eCLIP6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 ELOAQ14241 798 aaKnown RBP6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 SUZ12Q15022 739 aaKnown RBP6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 C6orf118Q5T5N4 469 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 SH3RF1Q7Z6J0 888 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 CCER1Q8TC90 406 aaPredicted RBP6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 MAP4K5Q9Y4K4 846 aa6.25□□□□□ -1.41
SFSWAP-211ENST00000542813 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
SFSWAP-211ENST00000542813 TMEM164Q5U3C3 297 aa6.24□□□□□ -1.41
SFSWAP-211ENST00000542813 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
SFSWAP-211ENST00000542813 MEIOBQ8N635 442 aa6.24□□□□□ -1.41
SFSWAP-211ENST00000542813 USP35Q9P2H5 1018 aa6.24□□□□□ -1.41
SFSWAP-211ENST00000542813 BMP2P12643 396 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 FSHRP23945 695 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 NR6A1Q15406 480 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 VASH1Q7L8A9 365 aaPredicted RBP6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 TXNDC2Q86VQ3 553 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 TRMT44Q8IYL2 757 aaKnown RBP6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 ZMIZ1Q9ULJ6 1067 aa6.23□□□□□ -1.41
SFSWAP-211ENST00000542813 STK32AQ8WU08 396 aa6.22□□□□□ -1.41
SFSWAP-211ENST00000542813 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
SFSWAP-211ENST00000542813 NOVA2Q9UNW9 492 aaKnown RBP6.22□□□□□ -1.41
SFSWAP-211ENST00000542813 EMILIN1Q9Y6C2 1016 aa6.22□□□□□ -1.41
SFSWAP-211ENST00000542813 MAGEB6P1A0A0J9YX57 407 aa6.21□□□□□ -1.42
SFSWAP-211ENST00000542813 ERCC3P19447 782 aa6.21□□□□□ -1.42
SFSWAP-211ENST00000542813 CCDC116Q8IYX3 515 aa6.21□□□□□ -1.42
SFSWAP-211ENST00000542813 SOS2Q07890 1332 aaPredicted RBP6.21□□□□□ -1.42
SFSWAP-211ENST00000542813 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
SFSWAP-211ENST00000542813 NR1H3Q13133 447 aa6.2□□□□□ -1.42
SFSWAP-211ENST00000542813 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
SFSWAP-211ENST00000542813 TSEN34Q9BSV6 310 aaKnown RBP6.2□□□□□ -1.42
SFSWAP-211ENST00000542813 IGSF5Q9NSI5 407 aa6.2□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 PIK3CDO00329 1044 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 ARID4AP29374 1257 aaPredicted RBP6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 ERFEQ4G0M1 354 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L2Q6R6M4 530 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 CARD14Q9BXL6 1004 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 DNMT3LQ9UJW3 386 aa6.19□□□□□ -1.42
SFSWAP-211ENST00000542813 FBXO45P0C2W1 286 aa6.18□□□□□ -1.42
SFSWAP-211ENST00000542813 SSFA2P28290 1259 aa6.18□□□□□ -1.42
SFSWAP-211ENST00000542813 MRRFQ96E11 262 aaKnown RBP6.18□□□□□ -1.42
SFSWAP-211ENST00000542813 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L5A8MUK1 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L15C9J2P7 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L10C9JJH3 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L13C9JLJ4 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L11C9JVI0 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L21D6R901 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L18D6R9N7 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L22D6RA61 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L17D6RBQ6 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L19D6RCP7 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L20D6RJB6 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 SKIP12755 728 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 USP17L24Q0WX57 530 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 PDXDC2PQ6P474 469 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 PLEKHM2Q8IWE5 1019 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 PGPEP1Q9NXJ5 209 aa6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 KIAA1522Q9P206 1035 aaPredicted RBP6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
SFSWAP-211ENST00000542813 SOWAHDA6NJG2 315 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 TTLL8A6PVC2 850 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 ZBBXA8MT70 800 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 PPP1R26Q5T8A7 1209 aaPredicted RBP6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 Q6ZVU0 165 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 ARHGAP9Q9BRR9 750 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 FKBPLQ9UIM3 349 aa6.16□□□□□ -1.42
SFSWAP-211ENST00000542813 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 ZNF16P17020 682 aaPredicted RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 CRTC2Q53ET0 693 aaPredicted RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 LARP1Q6PKG0 1096 aaKnown RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 DEPDC4Q8N2C3 294 aa6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 CLP1Q92989 425 aaKnown RBP6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 SIRT1Q96EB6 747 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms