RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 NR1H3Q13133 447 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 CC2D2BQ6DHV5 1058 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 KDF1Q8NAX2 398 aaPredicted RBP5.84□□□□□ -1.47
KNTC1-213ENST00000542727 IL27Q8NEV9 243 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 CYLDQ9NQC7 956 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 NDUFB9Q9Y6M9 179 aa5.84□□□□□ -1.47
KNTC1-213ENST00000542727 GIGYF1O75420 1035 aaPredicted RBP5.83□□□□□ -1.48
KNTC1-213ENST00000542727 ERVK-9P63128 1117 aa5.83□□□□□ -1.48
KNTC1-213ENST00000542727 CYP2U1Q7Z449 544 aa5.83□□□□□ -1.48
KNTC1-213ENST00000542727 VWA5B2Q8N398 1253 aa5.83□□□□□ -1.48
KNTC1-213ENST00000542727 SVOPQ8N4V2 548 aa5.83□□□□□ -1.48
KNTC1-213ENST00000542727 SRSF11Q05519 484 aaKnown RBP5.82□□□□□ -1.48
KNTC1-213ENST00000542727 RNFT1Q5M7Z0 435 aa5.82□□□□□ -1.48
KNTC1-213ENST00000542727 FOXR1Q6PIV2 292 aa5.82□□□□□ -1.48
KNTC1-213ENST00000542727 H7C1W4 665 aa5.81□□□□□ -1.48
KNTC1-213ENST00000542727 WDR44Q5JSH3 913 aa5.81□□□□□ -1.48
KNTC1-213ENST00000542727 ZNF385CQ66K41 422 aaPredicted RBP5.81□□□□□ -1.48
KNTC1-213ENST00000542727 ESF1Q9H501 851 aaKnown RBP5.81□□□□□ -1.48
KNTC1-213ENST00000542727 BRPF1P55201 1214 aaPredicted RBP5.8□□□□□ -1.48
KNTC1-213ENST00000542727 CLN3Q13286 438 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 TRIM22Q8IYM9 498 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 NLRP3Q96P20 1036 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 PRM3Q9NNZ6 103 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 ADAMTS8Q9UP79 889 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 DYRK1BQ9Y463 629 aa5.8□□□□□ -1.48
KNTC1-213ENST00000542727 A0A1W2PRU2 124 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 MEN1O00255 615 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 MAP3K10Q02779 954 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 SLC27A3Q5K4L6 730 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 PRICKLE2Q7Z3G6 844 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 TMEM151AQ8N4L1 468 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 MTMR14Q8NCE2 650 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 ENAMQ9NRM1 1142 aa5.79□□□□□ -1.48
KNTC1-213ENST00000542727 SPATA31C2B4DYI2 1134 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 TRAK2O60296 914 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 ADAMTS2O95450 1211 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 KANK3Q6NY19 840 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 ZNF837Q96EG3 531 aaPredicted RBP5.78□□□□□ -1.48
KNTC1-213ENST00000542727 SCARF2Q96GP6 870 aaPredicted RBP5.78□□□□□ -1.48
KNTC1-213ENST00000542727 MBIPQ9NS73 344 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 PCDHB11Q9Y5F2 797 aa5.78□□□□□ -1.48
KNTC1-213ENST00000542727 ARHGEF15O94989 841 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 MYCP01106 439 aaPredicted RBP5.77□□□□□ -1.49
KNTC1-213ENST00000542727 GNRH1P01148 92 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 GSK3AP49840 483 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 RASSF7Q02833 373 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 TRERF1Q96PN7 1200 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 GRIP2Q9C0E4 1043 aa5.77□□□□□ -1.49
KNTC1-213ENST00000542727 GPR37L1O60883 481 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 GDF11O95390 407 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 RHOQP17081 205 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 MARSP56192 900 aaKnown RBP5.76□□□□□ -1.49
KNTC1-213ENST00000542727 GAS6Q14393 721 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 NBPF10Q6P3W6 841 aaKnown RBP5.76□□□□□ -1.49
KNTC1-213ENST00000542727 TAS1R3Q7RTX0 852 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 NBPF15Q8N660 670 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 OSBPL3Q9H4L5 887 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 LRRC4BQ9NT99 713 aa5.76□□□□□ -1.49
KNTC1-213ENST00000542727 CUEDC1Q9NWM3 386 aaPredicted RBP5.76□□□□□ -1.49
KNTC1-213ENST00000542727 WASLO00401 505 aaPredicted RBP5.75□□□□□ -1.49
KNTC1-213ENST00000542727 SCTRP47872 440 aa5.75□□□□□ -1.49
KNTC1-213ENST00000542727 EIF4G2P78344 907 aaKnown RBP eCLIP5.75□□□□□ -1.49
KNTC1-213ENST00000542727 FOXK2Q01167 660 aa5.75□□□□□ -1.49
KNTC1-213ENST00000542727 RIPOR1Q6ZS17 1223 aa5.75□□□□□ -1.49
KNTC1-213ENST00000542727 ARHGEF10LQ9HCE6 1279 aa5.75□□□□□ -1.49
KNTC1-213ENST00000542727 NSFL1CQ9UNZ2 370 aaKnown RBP5.75□□□□□ -1.49
KNTC1-213ENST00000542727 DNMT3AQ9Y6K1 912 aaPredicted RBP5.75□□□□□ -1.49
KNTC1-213ENST00000542727 GTF2E1P29083 439 aaPredicted RBP5.74□□□□□ -1.49
KNTC1-213ENST00000542727 LBRQ14739 615 aaKnown RBP5.74□□□□□ -1.49
KNTC1-213ENST00000542727 ESCO1Q5FWF5 840 aa5.74□□□□□ -1.49
KNTC1-213ENST00000542727 WHAMMQ8TF30 809 aa5.74□□□□□ -1.49
KNTC1-213ENST00000542727 ESYT1Q9BSJ8 1104 aa5.74□□□□□ -1.49
KNTC1-213ENST00000542727 TIMMDC1Q9NPL8 285 aa5.74□□□□□ -1.49
KNTC1-213ENST00000542727 CEP126Q9P2H0 1117 aa5.74□□□□□ -1.49
KNTC1-213ENST00000542727 A0A1B0GTH6 734 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 IGHA1P01876 353 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 F11P03951 625 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 CELA2BP08218 269 aaPredicted RBP5.73□□□□□ -1.49
KNTC1-213ENST00000542727 POU4F2Q12837 409 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 DBN1Q16643 649 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 LYPD4Q6UWN0 246 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 KCTD17Q8N5Z5 321 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 CNKSR1Q969H4 720 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 SIRT1Q96EB6 747 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 GAS2L1Q99501 681 aaPredicted RBP5.73□□□□□ -1.49
KNTC1-213ENST00000542727 SNRKQ9NRH2 765 aa5.73□□□□□ -1.49
KNTC1-213ENST00000542727 IGF1RP08069 1367 aa5.72□□□□□ -1.49
KNTC1-213ENST00000542727 PHF20L1A8MW92 1017 aa5.72□□□□□ -1.49
KNTC1-213ENST00000542727 USP4Q13107 963 aa5.72□□□□□ -1.49
KNTC1-213ENST00000542727 NUCKS1Q9H1E3 243 aaKnown RBP5.72□□□□□ -1.49
KNTC1-213ENST00000542727 PHF24Q9UPV7 400 aa5.72□□□□□ -1.49
KNTC1-213ENST00000542727 BCRP11274 1271 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 MX2P20592 715 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 IRS1P35568 1242 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 MAP2K3P46734 347 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 SLFNL1Q499Z3 407 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 GNASQ5JWF2 1037 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 PODNQ7Z5L7 613 aa5.71□□□□□ -1.5
KNTC1-213ENST00000542727 GTPBP3Q969Y2 492 aaKnown RBP5.71□□□□□ -1.5
KNTC1-213ENST00000542727 ZSCAN10Q96SZ4 725 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms