RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
SPTB-205ENST00000542694 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
SPTB-205ENST00000542694 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
SPTB-205ENST00000542694 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
SPTB-205ENST00000542694 NCAPD2Q15021 1401 aa20.95■□□□□ 0.95
SPTB-205ENST00000542694 PLSCR1O15162 318 aa20.95■□□□□ 0.94
SPTB-205ENST00000542694 EN1Q05925 392 aaPredicted RBP20.95■□□□□ 0.94
SPTB-205ENST00000542694 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
SPTB-205ENST00000542694 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
SPTB-205ENST00000542694 MEGF6O75095 1541 aa20.94■□□□□ 0.94
SPTB-205ENST00000542694 IL13P35225 146 aa20.93■□□□□ 0.94
SPTB-205ENST00000542694 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
SPTB-205ENST00000542694 AMOTQ4VCS5 1084 aa20.92■□□□□ 0.94
SPTB-205ENST00000542694 PLEKHO1Q53GL0 409 aaPredicted RBP20.92■□□□□ 0.94
SPTB-205ENST00000542694 CAMKK2Q96RR4 588 aa20.92■□□□□ 0.94
SPTB-205ENST00000542694 SBF2Q86WG5 1849 aa20.9■□□□□ 0.94
SPTB-205ENST00000542694 NUDCQ9Y266 331 aa20.9■□□□□ 0.94
SPTB-205ENST00000542694 HMGB2P26583 209 aaKnown RBP20.89■□□□□ 0.93
SPTB-205ENST00000542694 RALBP1Q15311 655 aa20.89■□□□□ 0.93
SPTB-205ENST00000542694 SULT6B1Q6IMI4 303 aa20.89■□□□□ 0.93
SPTB-205ENST00000542694 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.93
SPTB-205ENST00000542694 ACSBG1Q96GR2 724 aa20.89■□□□□ 0.93
SPTB-205ENST00000542694 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
SPTB-205ENST00000542694 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
SPTB-205ENST00000542694 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
SPTB-205ENST00000542694 TNS1Q9HBL0 1735 aaKnown RBP20.87■□□□□ 0.93
SPTB-205ENST00000542694 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
SPTB-205ENST00000542694 KCNQ2O43526 872 aa20.86■□□□□ 0.93
SPTB-205ENST00000542694 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
SPTB-205ENST00000542694 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
SPTB-205ENST00000542694 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
SPTB-205ENST00000542694 CYP27B1O15528 508 aa20.85■□□□□ 0.93
SPTB-205ENST00000542694 KDRP35968 1356 aa20.85■□□□□ 0.93
SPTB-205ENST00000542694 ZNF316A6NFI3 1004 aaPredicted RBP20.84■□□□□ 0.93
SPTB-205ENST00000542694 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.93
SPTB-205ENST00000542694 C1orf141Q5JVX7 400 aa20.83■□□□□ 0.93
SPTB-205ENST00000542694 PHKG2P15735 406 aa20.82■□□□□ 0.92
SPTB-205ENST00000542694 NHSQ6T4R5 1651 aa20.82■□□□□ 0.92
SPTB-205ENST00000542694 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
SPTB-205ENST00000542694 PTF1AQ7RTS3 328 aa20.81■□□□□ 0.92
SPTB-205ENST00000542694 AEBP1Q8IUX7 1158 aa20.81■□□□□ 0.92
SPTB-205ENST00000542694 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
SPTB-205ENST00000542694 TXNRD1Q16881 649 aa20.8■□□□□ 0.92
SPTB-205ENST00000542694 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
SPTB-205ENST00000542694 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
SPTB-205ENST00000542694 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
SPTB-205ENST00000542694 HMOX1P09601 288 aa20.79■□□□□ 0.92
SPTB-205ENST00000542694 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
SPTB-205ENST00000542694 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
SPTB-205ENST00000542694 SHANK3Q9BYB0 1731 aa20.78■□□□□ 0.92
SPTB-205ENST00000542694 ERVV-2B6SEH9 535 aa20.78■□□□□ 0.92
SPTB-205ENST00000542694 MPRIPQ6WCQ1 1025 aa20.77■□□□□ 0.92
SPTB-205ENST00000542694 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
SPTB-205ENST00000542694 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPTB-205ENST00000542694 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
SPTB-205ENST00000542694 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
SPTB-205ENST00000542694 TMOD3Q9NYL9 352 aa20.76■□□□□ 0.91
SPTB-205ENST00000542694 COL3A1P02461 1466 aaPredicted RBP20.75■□□□□ 0.91
SPTB-205ENST00000542694 FCHSD2O94868 740 aa20.75■□□□□ 0.91
SPTB-205ENST00000542694 NEFMP07197 916 aa20.75■□□□□ 0.91
SPTB-205ENST00000542694 PROM2Q8N271 834 aa20.75■□□□□ 0.91
SPTB-205ENST00000542694 BTAF1O14981 1849 aa20.74■□□□□ 0.91
SPTB-205ENST00000542694 GAS2L2Q8NHY3 880 aa20.74■□□□□ 0.91
SPTB-205ENST00000542694 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
SPTB-205ENST00000542694 STK32BQ9NY57 414 aa20.73■□□□□ 0.91
SPTB-205ENST00000542694 R3HDM1Q15032 1099 aaKnown RBP20.72■□□□□ 0.91
SPTB-205ENST00000542694 DOT1LQ8TEK3 1739 aa20.72■□□□□ 0.91
SPTB-205ENST00000542694 RREB1Q92766 1687 aa20.71■□□□□ 0.91
SPTB-205ENST00000542694 CABP4P57796 275 aa20.71■□□□□ 0.91
SPTB-205ENST00000542694 PIGBQ92521 554 aa20.71■□□□□ 0.91
SPTB-205ENST00000542694 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
SPTB-205ENST00000542694 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
SPTB-205ENST00000542694 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
SPTB-205ENST00000542694 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
SPTB-205ENST00000542694 PSDA5PKW4 1024 aaPredicted RBP20.68■□□□□ 0.9
SPTB-205ENST00000542694 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
SPTB-205ENST00000542694 SLC15A2Q16348 729 aa20.67■□□□□ 0.9
SPTB-205ENST00000542694 NUP188Q5SRE5 1749 aa20.67■□□□□ 0.9
SPTB-205ENST00000542694 GNAT3A8MTJ3 354 aa20.66■□□□□ 0.9
SPTB-205ENST00000542694 PALLDQ8WX93 1383 aa20.66■□□□□ 0.9
SPTB-205ENST00000542694 ITGB4P16144 1822 aa20.66■□□□□ 0.9
SPTB-205ENST00000542694 LRRC4BQ9NT99 713 aa20.65■□□□□ 0.9
SPTB-205ENST00000542694 RNMTO43148 476 aaKnown RBP20.64■□□□□ 0.89
SPTB-205ENST00000542694 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
SPTB-205ENST00000542694 SLC52A2Q9HAB3 445 aa20.63■□□□□ 0.89
SPTB-205ENST00000542694 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
SPTB-205ENST00000542694 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
SPTB-205ENST00000542694 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
SPTB-205ENST00000542694 ANP32CO43423 234 aa20.62■□□□□ 0.89
SPTB-205ENST00000542694 HTATSF1O43719 755 aaKnown RBP20.62■□□□□ 0.89
SPTB-205ENST00000542694 SIK1P57059 783 aa20.62■□□□□ 0.89
SPTB-205ENST00000542694 RTF1Q92541 710 aaKnown RBP20.62■□□□□ 0.89
SPTB-205ENST00000542694 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
SPTB-205ENST00000542694 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
SPTB-205ENST00000542694 WDR43Q15061 677 aaKnown RBP eCLIP20.61■□□□□ 0.89
SPTB-205ENST00000542694 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
SPTB-205ENST00000542694 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
SPTB-205ENST00000542694 TFCP2L1Q9NZI6 479 aa20.61■□□□□ 0.89
SPTB-205ENST00000542694 LY75O60449 1722 aa20.61■□□□□ 0.89
SPTB-205ENST00000542694 TOGARAM1Q9Y4F4 1720 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms