RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	TAF1L	Q8IZX4	1826 aa		12.46	□□□□□ -0.41
POLE-218	ENST00000542362	IL2RB	P14784	551 aa		12.46	□□□□□ -0.41
POLE-218	ENST00000542362	EIF4A2	Q14240	407 aa	Known RBP	12.46	□□□□□ -0.41
POLE-218	ENST00000542362	SCN11A	Q9UI33	1791 aa		12.46	□□□□□ -0.42
POLE-218	ENST00000542362	EN1	Q05925	392 aa	Predicted RBP	12.45	□□□□□ -0.42
POLE-218	ENST00000542362	ACSBG1	Q96GR2	724 aa		12.45	□□□□□ -0.42
POLE-218	ENST00000542362	KIF24	Q5T7B8	1368 aa		12.44	□□□□□ -0.42
POLE-218	ENST00000542362	KCNQ2	O43526	872 aa		12.44	□□□□□ -0.42
POLE-218	ENST00000542362	EYA1	Q99502	592 aa		12.44	□□□□□ -0.42
POLE-218	ENST00000542362	EZH2	Q15910	746 aa	Known RBP	12.43	□□□□□ -0.42
POLE-218	ENST00000542362	EXOC5	O00471	708 aa		12.42	□□□□□ -0.42
POLE-218	ENST00000542362	FAM196A	Q6ZSG2	479 aa		12.42	□□□□□ -0.42
POLE-218	ENST00000542362	AEBP1	Q8IUX7	1158 aa		12.42	□□□□□ -0.42
POLE-218	ENST00000542362	DDX54	Q8TDD1	881 aa	Known RBP	12.42	□□□□□ -0.42
POLE-218	ENST00000542362	PAPPA	Q13219	1627 aa		12.41	□□□□□ -0.42
POLE-218	ENST00000542362	MTHFS	P49914	203 aa		12.41	□□□□□ -0.42
POLE-218	ENST00000542362	DDX10	Q13206	875 aa	Known RBP	12.41	□□□□□ -0.42
POLE-218	ENST00000542362	APBA3	O96018	575 aa		12.4	□□□□□ -0.42
POLE-218	ENST00000542362	C5	P01031	1676 aa		12.4	□□□□□ -0.42
POLE-218	ENST00000542362	NPC1L1	Q9UHC9	1359 aa		12.4	□□□□□ -0.42
POLE-218	ENST00000542362	IGSF1	Q8N6C5	1336 aa		12.39	□□□□□ -0.43
POLE-218	ENST00000542362	SIPA1L3	O60292	1781 aa	Predicted RBP	12.39	□□□□□ -0.43
POLE-218	ENST00000542362	CASZ1	Q86V15	1759 aa		12.39	□□□□□ -0.43
POLE-218	ENST00000542362	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.39	□□□□□ -0.43
POLE-218	ENST00000542362	LRP5	O75197	1615 aa		12.38	□□□□□ -0.43
POLE-218	ENST00000542362	CYP27B1	O15528	508 aa		12.38	□□□□□ -0.43
POLE-218	ENST00000542362	IL13	P35225	146 aa		12.38	□□□□□ -0.43
POLE-218	ENST00000542362	SF3B2	Q13435	895 aa	Known RBP	12.38	□□□□□ -0.43
POLE-218	ENST00000542362	ZCRB1	Q8TBF4	217 aa	Known RBP	12.38	□□□□□ -0.43
POLE-218	ENST00000542362	CAMKK2	Q96RR4	588 aa		12.38	□□□□□ -0.43
POLE-218	ENST00000542362	BCL9	O00512	1426 aa		12.37	□□□□□ -0.43
POLE-218	ENST00000542362	PSD	A5PKW4	1024 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-218	ENST00000542362	TAT	P17735	454 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-218	ENST00000542362	BAG6	P46379	1132 aa		12.37	□□□□□ -0.43
POLE-218	ENST00000542362	RAPGEF4	Q8WZA2	1011 aa		12.37	□□□□□ -0.43
POLE-218	ENST00000542362	ADAMTS7	Q9UKP4	1686 aa		12.36	□□□□□ -0.43
POLE-218	ENST00000542362	HMOX1	P09601	288 aa		12.36	□□□□□ -0.43
POLE-218	ENST00000542362	QSER1	Q2KHR3	1735 aa		12.36	□□□□□ -0.43
POLE-218	ENST00000542362	PARD3	Q8TEW0	1356 aa		12.35	□□□□□ -0.43
POLE-218	ENST00000542362	COL5A3	P25940	1745 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-218	ENST00000542362	PPP2R1A	P30153	589 aa		12.35	□□□□□ -0.43
POLE-218	ENST00000542362	KCNQ4	P56696	695 aa		12.35	□□□□□ -0.43
POLE-218	ENST00000542362	PROM2	Q8N271	834 aa		12.35	□□□□□ -0.43
POLE-218	ENST00000542362	UBR3	Q6ZT12	1888 aa		12.34	□□□□□ -0.43
POLE-218	ENST00000542362	SULT6B1	Q6IMI4	303 aa		12.34	□□□□□ -0.43
POLE-218	ENST00000542362	SYTL4	Q96C24	671 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-218	ENST00000542362	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-218	ENST00000542362	KDM6A	O15550	1401 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-218	ENST00000542362	TJP1	Q07157	1748 aa		12.34	□□□□□ -0.43
POLE-218	ENST00000542362	KDR	P35968	1356 aa		12.33	□□□□□ -0.44
POLE-218	ENST00000542362	PRIM1	P49642	420 aa	Known RBP	12.33	□□□□□ -0.44
POLE-218	ENST00000542362	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.33	□□□□□ -0.44
POLE-218	ENST00000542362	PCDH11X	Q9BZA7	1347 aa		12.33	□□□□□ -0.44
POLE-218	ENST00000542362	PCDH11Y	Q9BZA8	1340 aa		12.33	□□□□□ -0.44
POLE-218	ENST00000542362	MYH14	Q7Z406	1995 aa	Known RBP	12.32	□□□□□ -0.44
POLE-218	ENST00000542362	ZEB1	P37275	1124 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-218	ENST00000542362	UBR2	Q8IWV8	1755 aa		12.32	□□□□□ -0.44
POLE-218	ENST00000542362	DIAPH1	O60610	1272 aa	Known RBP	12.31	□□□□□ -0.44
POLE-218	ENST00000542362	R3HDM1	Q15032	1099 aa	Known RBP	12.31	□□□□□ -0.44
POLE-218	ENST00000542362	C4B	P0C0L5	1744 aa		12.31	□□□□□ -0.44
POLE-218	ENST00000542362	U2SURP	O15042	1029 aa	Known RBP	12.3	□□□□□ -0.44
POLE-218	ENST00000542362	PHKG2	P15735	406 aa		12.3	□□□□□ -0.44
POLE-218	ENST00000542362	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.3	□□□□□ -0.44
POLE-218	ENST00000542362	LRRC4B	Q9NT99	713 aa		12.3	□□□□□ -0.44
POLE-218	ENST00000542362	C4A	P0C0L4	1744 aa		12.29	□□□□□ -0.44
POLE-218	ENST00000542362	TXNRD1	Q16881	649 aa		12.29	□□□□□ -0.44
POLE-218	ENST00000542362	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.29	□□□□□ -0.44
POLE-218	ENST00000542362	MPRIP	Q6WCQ1	1025 aa		12.28	□□□□□ -0.44
POLE-218	ENST00000542362	PLSCR1	O15162	318 aa		12.27	□□□□□ -0.45
POLE-218	ENST00000542362	ZNF827	Q17R98	1081 aa		12.27	□□□□□ -0.45
POLE-218	ENST00000542362	SPG7	Q9UQ90	795 aa		12.27	□□□□□ -0.45
POLE-218	ENST00000542362	COL24A1	Q17RW2	1714 aa		12.27	□□□□□ -0.45
POLE-218	ENST00000542362	MTHFSD	Q2M296	383 aa	Known RBP	12.26	□□□□□ -0.45
POLE-218	ENST00000542362	SMIM5	Q71RC9	77 aa		12.26	□□□□□ -0.45
POLE-218	ENST00000542362	PIGB	Q92521	554 aa		12.26	□□□□□ -0.45
POLE-218	ENST00000542362	MRC1	P22897	1456 aa		12.26	□□□□□ -0.45
POLE-218	ENST00000542362	ZNF831	Q5JPB2	1677 aa		12.26	□□□□□ -0.45
POLE-218	ENST00000542362	KDM3B	Q7LBC6	1761 aa		12.25	□□□□□ -0.45
POLE-218	ENST00000542362	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.25	□□□□□ -0.45
POLE-218	ENST00000542362	NKX1-1	Q15270	411 aa	Predicted RBP	12.25	□□□□□ -0.45
POLE-218	ENST00000542362	IFNL2	Q8IZJ0	200 aa		12.25	□□□□□ -0.45
POLE-218	ENST00000542362	PHACTR3	Q96KR7	559 aa		12.25	□□□□□ -0.45
POLE-218	ENST00000542362	RSPH6A	Q9H0K4	717 aa		12.25	□□□□□ -0.45
POLE-218	ENST00000542362	LGR6	Q9HBX8	967 aa		12.25	□□□□□ -0.45
POLE-218	ENST00000542362	CIC	Q96RK0	1608 aa	Predicted RBP	12.25	□□□□□ -0.45
POLE-218	ENST00000542362	PRKAR2B	P31323	418 aa		12.24	□□□□□ -0.45
POLE-218	ENST00000542362	CCDC184	Q52MB2	194 aa		12.24	□□□□□ -0.45
POLE-218	ENST00000542362	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.24	□□□□□ -0.45
POLE-218	ENST00000542362	PALLD	Q8WX93	1383 aa		12.24	□□□□□ -0.45
POLE-218	ENST00000542362	ASAP1	Q9ULH1	1129 aa		12.24	□□□□□ -0.45
POLE-218	ENST00000542362	AMIGO3	Q86WK7	504 aa		12.23	□□□□□ -0.45
POLE-218	ENST00000542362	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.23	□□□□□ -0.45
POLE-218	ENST00000542362	KCP	Q6ZWJ8	1503 aa		12.22	□□□□□ -0.45
POLE-218	ENST00000542362	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.22	□□□□□ -0.45
POLE-218	ENST00000542362	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
POLE-218	ENST00000542362	CFAP53	Q96M91	514 aa		12.22	□□□□□ -0.45
POLE-218	ENST00000542362	SLC4A9	Q96Q91	983 aa		12.21	□□□□□ -0.45
POLE-218	ENST00000542362	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.21	□□□□□ -0.45
POLE-218	ENST00000542362	ATG3	Q9NT62	314 aa		12.21	□□□□□ -0.45
POLE-218	ENST00000542362	TMOD3	Q9NYL9	352 aa		12.21	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms