RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CC2D1BQ5T0F9 858 aaKnown RBP27.33■■□□□ 1.97
CACNA2D4-215ENST00000542340 PTF1AQ7RTS3 328 aa27.31■■□□□ 1.96
CACNA2D4-215ENST00000542340 PLSCR1O15162 318 aa27.3■■□□□ 1.96
CACNA2D4-215ENST00000542340 KCNQ2O43526 872 aa27.27■■□□□ 1.96
CACNA2D4-215ENST00000542340 ACSBG1Q96GR2 724 aa27.27■■□□□ 1.96
CACNA2D4-215ENST00000542340 MTHFSP49914 203 aa27.26■■□□□ 1.95
CACNA2D4-215ENST00000542340 IGSF1Q8N6C5 1336 aa27.25■■□□□ 1.95
CACNA2D4-215ENST00000542340 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
CACNA2D4-215ENST00000542340 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
CACNA2D4-215ENST00000542340 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
CACNA2D4-215ENST00000542340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.23■■□□□ 1.95
CACNA2D4-215ENST00000542340 SHANK3Q9BYB0 1731 aa27.23■■□□□ 1.95
CACNA2D4-215ENST00000542340 NHSQ6T4R5 1651 aa27.23■■□□□ 1.95
CACNA2D4-215ENST00000542340 IL13P35225 146 aa27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 SPG7Q9UQ90 795 aa27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 RGPD3A6NKT7 1758 aaPredicted RBP27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 RGPD4Q7Z3J3 1758 aa27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 PLEKHG2Q9H7P9 1386 aa27.21■■□□□ 1.95
CACNA2D4-215ENST00000542340 RREB1Q92766 1687 aa27.19■■□□□ 1.94
CACNA2D4-215ENST00000542340 CYP27B1O15528 508 aa27.18■■□□□ 1.94
CACNA2D4-215ENST00000542340 PKD1L3Q7Z443 1732 aa27.17■■□□□ 1.94
CACNA2D4-215ENST00000542340 PRIM1P49642 420 aaKnown RBP27.17■■□□□ 1.94
CACNA2D4-215ENST00000542340 PROM2Q8N271 834 aa27.17■■□□□ 1.94
CACNA2D4-215ENST00000542340 NBPF14Q5TI25 921 aa27.16■■□□□ 1.94
CACNA2D4-215ENST00000542340 KAT6BQ8WYB5 2073 aa27.16■■□□□ 1.94
CACNA2D4-215ENST00000542340 TXNRD1Q16881 649 aa27.15■■□□□ 1.94
CACNA2D4-215ENST00000542340 NKX1-1Q15270 411 aaPredicted RBP27.14■■□□□ 1.94
CACNA2D4-215ENST00000542340 SYTL4Q96C24 671 aaPredicted RBP27.14■■□□□ 1.94
CACNA2D4-215ENST00000542340 NUP188Q5SRE5 1749 aa27.13■■□□□ 1.93
CACNA2D4-215ENST00000542340 PSDA5PKW4 1024 aaPredicted RBP27.13■■□□□ 1.93
CACNA2D4-215ENST00000542340 R3HDM1Q15032 1099 aaKnown RBP27.13■■□□□ 1.93
CACNA2D4-215ENST00000542340 KDRP35968 1356 aa27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 BTAF1O14981 1849 aa27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 DIAPH1O60610 1272 aaKnown RBP27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 SULT6B1Q6IMI4 303 aa27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 DOT1LQ8TEK3 1739 aa27.12■■□□□ 1.93
CACNA2D4-215ENST00000542340 IFNL2Q8IZJ0 200 aa27.11■■□□□ 1.93
CACNA2D4-215ENST00000542340 PLEKHO1Q53GL0 409 aaPredicted RBP27.1■■□□□ 1.93
CACNA2D4-215ENST00000542340 PHKG2P15735 406 aa27.09■■□□□ 1.93
CACNA2D4-215ENST00000542340 AMOTQ4VCS5 1084 aa27.09■■□□□ 1.93
CACNA2D4-215ENST00000542340 PPP2R1AP30153 589 aa27.07■■□□□ 1.92
CACNA2D4-215ENST00000542340 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
CACNA2D4-215ENST00000542340 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
CACNA2D4-215ENST00000542340 DDX10Q13206 875 aaKnown RBP27.04■■□□□ 1.92
CACNA2D4-215ENST00000542340 SLC27A3Q5K4L6 730 aa27.04■■□□□ 1.92
CACNA2D4-215ENST00000542340 MPRIPQ6WCQ1 1025 aa27.03■■□□□ 1.92
CACNA2D4-215ENST00000542340 HSP90AB1P08238 724 aaKnown RBP27.02■■□□□ 1.92
CACNA2D4-215ENST00000542340 HMOX1P09601 288 aa27.02■■□□□ 1.92
CACNA2D4-215ENST00000542340 ZNF530Q6P9A1 599 aaPredicted RBP27.02■■□□□ 1.92
CACNA2D4-215ENST00000542340 ANO8Q9HCE9 1232 aaPredicted RBP27.02■■□□□ 1.92
CACNA2D4-215ENST00000542340 LRRC4BQ9NT99 713 aa27.01■■□□□ 1.91
CACNA2D4-215ENST00000542340 TOGARAM1Q9Y4F4 1720 aa27■■□□□ 1.91
CACNA2D4-215ENST00000542340 STK32BQ9NY57 414 aa27■■□□□ 1.91
CACNA2D4-215ENST00000542340 SRCAPQ6ZRS2 3230 aa27■■□□□ 1.91
CACNA2D4-215ENST00000542340 U2SURPO15042 1029 aaKnown RBP26.99■■□□□ 1.91
CACNA2D4-215ENST00000542340 PIGBQ92521 554 aa26.99■■□□□ 1.91
CACNA2D4-215ENST00000542340 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
CACNA2D4-215ENST00000542340 SLC15A2Q16348 729 aa26.98■■□□□ 1.91
CACNA2D4-215ENST00000542340 C1orf141Q5JVX7 400 aa26.98■■□□□ 1.91
CACNA2D4-215ENST00000542340 TMOD3Q9NYL9 352 aa26.97■■□□□ 1.91
CACNA2D4-215ENST00000542340 ITGB4P16144 1822 aa26.96■■□□□ 1.91
CACNA2D4-215ENST00000542340 ERVV-2B6SEH9 535 aa26.96■■□□□ 1.91
CACNA2D4-215ENST00000542340 SMARCC1Q92922 1105 aaPredicted RBP26.96■■□□□ 1.91
CACNA2D4-215ENST00000542340 NUDCQ9Y266 331 aa26.96■■□□□ 1.91
CACNA2D4-215ENST00000542340 CCNL1Q9UK58 526 aaPredicted RBP26.95■■□□□ 1.9
CACNA2D4-215ENST00000542340 LY75O60449 1722 aa26.95■■□□□ 1.9
CACNA2D4-215ENST00000542340 PALLDQ8WX93 1383 aa26.94■■□□□ 1.9
CACNA2D4-215ENST00000542340 PAPPAQ13219 1627 aa26.94■■□□□ 1.9
CACNA2D4-215ENST00000542340 RALBP1Q15311 655 aa26.93■■□□□ 1.9
CACNA2D4-215ENST00000542340 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
CACNA2D4-215ENST00000542340 KDM6AO15550 1401 aaPredicted RBP26.92■■□□□ 1.9
CACNA2D4-215ENST00000542340 HMGB2P26583 209 aaKnown RBP26.92■■□□□ 1.9
CACNA2D4-215ENST00000542340 KCNQ4P56696 695 aa26.92■■□□□ 1.9
CACNA2D4-215ENST00000542340 MTHFSDQ2M296 383 aaKnown RBP26.9■■□□□ 1.9
CACNA2D4-215ENST00000542340 AKT1S1Q96B36 256 aa26.9■■□□□ 1.9
CACNA2D4-215ENST00000542340 LRP5O75197 1615 aa26.9■■□□□ 1.9
CACNA2D4-215ENST00000542340 ZNF827Q17R98 1081 aa26.89■■□□□ 1.9
CACNA2D4-215ENST00000542340 U2AF1L5P0DN76 240 aaPredicted RBP26.88■■□□□ 1.89
CACNA2D4-215ENST00000542340 CABP4P57796 275 aa26.88■■□□□ 1.89
CACNA2D4-215ENST00000542340 U2AF1Q01081 240 aaKnown RBP eCLIP26.88■■□□□ 1.89
CACNA2D4-215ENST00000542340 ASAP1Q9ULH1 1129 aa26.88■■□□□ 1.89
CACNA2D4-215ENST00000542340 RSPH6AQ9H0K4 717 aa26.87■■□□□ 1.89
CACNA2D4-215ENST00000542340 ATG3Q9NT62 314 aa26.87■■□□□ 1.89
CACNA2D4-215ENST00000542340 FCHSD2O94868 740 aa26.85■■□□□ 1.89
CACNA2D4-215ENST00000542340 PDGFDQ9GZP0 370 aaPredicted RBP26.85■■□□□ 1.89
CACNA2D4-215ENST00000542340 LOC102724428A0A0B4J2F2 783 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 SIK1P57059 783 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 NFATC2IPQ8NCF5 419 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 GAS2L2Q8NHY3 880 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 SPON1Q9HCB6 807 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 CASZ1Q86V15 1759 aa26.84■■□□□ 1.89
CACNA2D4-215ENST00000542340 TFCP2L1Q9NZI6 479 aa26.83■■□□□ 1.89
CACNA2D4-215ENST00000542340 RNMTO43148 476 aaKnown RBP26.82■■□□□ 1.88
CACNA2D4-215ENST00000542340 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
CACNA2D4-215ENST00000542340 PHACTR3Q96KR7 559 aa26.81■■□□□ 1.88
CACNA2D4-215ENST00000542340 SCN11AQ9UI33 1791 aa26.8■■□□□ 1.88
CACNA2D4-215ENST00000542340 SLC52A2Q9HAB3 445 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms