RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
LDHA-220ENST00000542179 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
LDHA-220ENST00000542179 GCP02774 474 aa12.21□□□□□ -0.45
LDHA-220ENST00000542179 AMPHP49418 695 aa12.21□□□□□ -0.45
LDHA-220ENST00000542179 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
LDHA-220ENST00000542179 DDX17Q92841 729 aaKnown RBP12.21□□□□□ -0.45
LDHA-220ENST00000542179 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
LDHA-220ENST00000542179 APAF1O14727 1248 aa12.2□□□□□ -0.46
LDHA-220ENST00000542179 SOX12O15370 315 aa12.2□□□□□ -0.46
LDHA-220ENST00000542179 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
LDHA-220ENST00000542179 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
LDHA-220ENST00000542179 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
LDHA-220ENST00000542179 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
LDHA-220ENST00000542179 ZNF521Q96K83 1311 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 HOXC9P31274 260 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 CCDC27Q2M243 656 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 IP6K1Q92551 441 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 LTN1O94822 1766 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
LDHA-220ENST00000542179 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
LDHA-220ENST00000542179 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
LDHA-220ENST00000542179 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
LDHA-220ENST00000542179 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
LDHA-220ENST00000542179 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
LDHA-220ENST00000542179 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
LDHA-220ENST00000542179 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
LDHA-220ENST00000542179 TOM1O60784 492 aa12.16□□□□□ -0.46
LDHA-220ENST00000542179 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
LDHA-220ENST00000542179 ABCC6O95255 1503 aa12.16□□□□□ -0.46
LDHA-220ENST00000542179 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 NEFMP07197 916 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 PLCG2P16885 1265 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 PRKAR2BP31323 418 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
LDHA-220ENST00000542179 CPDO75976 1380 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 KDRP35968 1356 aa12.15□□□□□ -0.46
LDHA-220ENST00000542179 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 HMOX1P09601 288 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
LDHA-220ENST00000542179 PSEN1P49768 467 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
LDHA-220ENST00000542179 EYA1Q99502 592 aa12.14□□□□□ -0.47
LDHA-220ENST00000542179 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
LDHA-220ENST00000542179 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
LDHA-220ENST00000542179 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
LDHA-220ENST00000542179 TRMT2AQ8IZ69 625 aaKnown RBP12.13□□□□□ -0.47
LDHA-220ENST00000542179 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
LDHA-220ENST00000542179 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
LDHA-220ENST00000542179 COL18A1P39060 1754 aa12.12□□□□□ -0.47
LDHA-220ENST00000542179 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
LDHA-220ENST00000542179 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
LDHA-220ENST00000542179 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
LDHA-220ENST00000542179 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
LDHA-220ENST00000542179 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
LDHA-220ENST00000542179 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
LDHA-220ENST00000542179 E9PSI1 815 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 RIPK4P57078 832 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 ZC3H6P61129 1189 aaKnown RBP12.1□□□□□ -0.47
LDHA-220ENST00000542179 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
LDHA-220ENST00000542179 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
LDHA-220ENST00000542179 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
LDHA-220ENST00000542179 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
LDHA-220ENST00000542179 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
LDHA-220ENST00000542179 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
LDHA-220ENST00000542179 IL16Q14005 1332 aa12.09□□□□□ -0.47
LDHA-220ENST00000542179 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
LDHA-220ENST00000542179 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 LMOD3Q0VAK6 560 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 LTV1Q96GA3 475 aaPredicted RBP12.08□□□□□ -0.48
LDHA-220ENST00000542179 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 ERBB3P21860 1342 aa12.08□□□□□ -0.48
LDHA-220ENST00000542179 LMO7Q8WWI1 1683 aa12.07□□□□□ -0.48
LDHA-220ENST00000542179 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
LDHA-220ENST00000542179 PHLPP1O60346 1717 aa12.07□□□□□ -0.48
LDHA-220ENST00000542179 FAM208AQ9UK61 1670 aaKnown RBP12.06□□□□□ -0.48
LDHA-220ENST00000542179 PLEKHG2Q9H7P9 1386 aa12.06□□□□□ -0.48
LDHA-220ENST00000542179 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
LDHA-220ENST00000542179 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
LDHA-220ENST00000542179 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
LDHA-220ENST00000542179 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
LDHA-220ENST00000542179 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
LDHA-220ENST00000542179 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
LDHA-220ENST00000542179 PRDM11Q9NQV5 511 aa12.05□□□□□ -0.48
LDHA-220ENST00000542179 SUPT16HQ9Y5B9 1047 aaKnown RBP12.05□□□□□ -0.48
LDHA-220ENST00000542179 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
LDHA-220ENST00000542179 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
LDHA-220ENST00000542179 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
LDHA-220ENST00000542179 CHRNA2Q15822 529 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms