RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
GABARAPL1-210ENST00000541960 MRPL50Q8N5N7 158 aaKnown RBP22.6■■□□□ 1.21
GABARAPL1-210ENST00000541960 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
GABARAPL1-210ENST00000541960 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
GABARAPL1-210ENST00000541960 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
GABARAPL1-210ENST00000541960 ALS2Q96Q42 1657 aa22.59■■□□□ 1.21
GABARAPL1-210ENST00000541960 GAS2L2Q8NHY3 880 aa22.59■■□□□ 1.21
GABARAPL1-210ENST00000541960 CADPS2Q86UW7 1296 aa22.57■■□□□ 1.2
GABARAPL1-210ENST00000541960 MSH6P52701 1360 aa22.57■■□□□ 1.2
GABARAPL1-210ENST00000541960 MS4A1P11836 297 aa22.57■■□□□ 1.2
GABARAPL1-210ENST00000541960 AAMPQ13685 434 aa22.57■■□□□ 1.2
GABARAPL1-210ENST00000541960 TMEM57Q8N5G2 664 aa22.57■■□□□ 1.2
GABARAPL1-210ENST00000541960 MIS18AQ9NYP9 233 aa22.56■■□□□ 1.2
GABARAPL1-210ENST00000541960 MED1Q15648 1581 aaPredicted RBP22.56■■□□□ 1.2
GABARAPL1-210ENST00000541960 RGPD2P0DJD1 1756 aa22.56■■□□□ 1.2
GABARAPL1-210ENST00000541960 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
GABARAPL1-210ENST00000541960 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
GABARAPL1-210ENST00000541960 RTF1Q92541 710 aaKnown RBP22.55■■□□□ 1.2
GABARAPL1-210ENST00000541960 ITPRIPQ8IWB1 547 aa22.55■■□□□ 1.2
GABARAPL1-210ENST00000541960 AXIN2Q9Y2T1 843 aa22.54■■□□□ 1.2
GABARAPL1-210ENST00000541960 LRRC37A3O60309 1634 aa22.54■■□□□ 1.2
GABARAPL1-210ENST00000541960 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
GABARAPL1-210ENST00000541960 GNAT3A8MTJ3 354 aa22.52■■□□□ 1.2
GABARAPL1-210ENST00000541960 KIAA0232Q92628 1395 aa22.51■■□□□ 1.19
GABARAPL1-210ENST00000541960 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
GABARAPL1-210ENST00000541960 DDX19BQ9UMR2 479 aa22.51■■□□□ 1.19
GABARAPL1-210ENST00000541960 MAP3K5Q99683 1374 aa22.51■■□□□ 1.19
GABARAPL1-210ENST00000541960 IL17REQ8NFR9 667 aa22.51■■□□□ 1.19
GABARAPL1-210ENST00000541960 ARHGAP45Q92619 1136 aa22.5■■□□□ 1.19
GABARAPL1-210ENST00000541960 PXDNQ92626 1479 aa22.5■■□□□ 1.19
GABARAPL1-210ENST00000541960 PDE4AP27815 886 aa22.5■■□□□ 1.19
GABARAPL1-210ENST00000541960 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
GABARAPL1-210ENST00000541960 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
GABARAPL1-210ENST00000541960 NPHP3Q7Z494 1330 aa22.49■■□□□ 1.19
GABARAPL1-210ENST00000541960 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
GABARAPL1-210ENST00000541960 NCAPD2Q15021 1401 aa22.49■■□□□ 1.19
GABARAPL1-210ENST00000541960 ZBTB40Q9NUA8 1239 aa22.48■■□□□ 1.19
GABARAPL1-210ENST00000541960 BACH2Q9BYV9 841 aa22.47■■□□□ 1.19
GABARAPL1-210ENST00000541960 RGS3P49796 1198 aa22.47■■□□□ 1.19
GABARAPL1-210ENST00000541960 TNS3Q68CZ2 1445 aa22.47■■□□□ 1.19
GABARAPL1-210ENST00000541960 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
GABARAPL1-210ENST00000541960 RGPD5Q99666 1765 aa22.46■■□□□ 1.19
GABARAPL1-210ENST00000541960 ABCC4O15439 1325 aa22.46■■□□□ 1.19
GABARAPL1-210ENST00000541960 CABLES1Q8TDN4 633 aa22.46■■□□□ 1.19
GABARAPL1-210ENST00000541960 CAMTA1Q9Y6Y1 1673 aa22.45■■□□□ 1.18
GABARAPL1-210ENST00000541960 SPATA31A3Q5VYP0 1347 aa22.43■■□□□ 1.18
GABARAPL1-210ENST00000541960 RWDD1Q9H446 243 aaPredicted RBP22.43■■□□□ 1.18
GABARAPL1-210ENST00000541960 RGS12O14924 1447 aa22.42■■□□□ 1.18
GABARAPL1-210ENST00000541960 ERBB3P21860 1342 aa22.42■■□□□ 1.18
GABARAPL1-210ENST00000541960 CEMIPQ8WUJ3 1361 aa22.42■■□□□ 1.18
GABARAPL1-210ENST00000541960 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
GABARAPL1-210ENST00000541960 CRYBG1Q9Y4K1 1723 aa22.41■■□□□ 1.18
GABARAPL1-210ENST00000541960 LGR6Q9HBX8 967 aa22.41■■□□□ 1.18
GABARAPL1-210ENST00000541960 COL18A1P39060 1754 aa22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 MSH5O43196 834 aa22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 HDAC1Q13547 482 aaPredicted RBP22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 TAF7Q15545 349 aaPredicted RBP22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
GABARAPL1-210ENST00000541960 SLAIN2Q9P270 581 aa22.39■■□□□ 1.18
GABARAPL1-210ENST00000541960 PDZRN3Q9UPQ7 1066 aa22.38■■□□□ 1.17
GABARAPL1-210ENST00000541960 ZNF530Q6P9A1 599 aaPredicted RBP22.38■■□□□ 1.17
GABARAPL1-210ENST00000541960 SLC4A2P04920 1241 aa22.37■■□□□ 1.17
GABARAPL1-210ENST00000541960 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
GABARAPL1-210ENST00000541960 C8orf34Q49A92 452 aa22.36■■□□□ 1.17
GABARAPL1-210ENST00000541960 CHRNA2Q15822 529 aa22.36■■□□□ 1.17
GABARAPL1-210ENST00000541960 AKAP4Q5JQC9 854 aa22.36■■□□□ 1.17
GABARAPL1-210ENST00000541960 C1orf115Q9H7X2 142 aa22.36■■□□□ 1.17
GABARAPL1-210ENST00000541960 G2E3Q7L622 706 aa22.35■■□□□ 1.17
GABARAPL1-210ENST00000541960 BABAM1Q9NWV8 329 aa22.35■■□□□ 1.17
GABARAPL1-210ENST00000541960 AMOTQ4VCS5 1084 aa22.35■■□□□ 1.17
GABARAPL1-210ENST00000541960 MPRIPQ6WCQ1 1025 aa22.35■■□□□ 1.17
GABARAPL1-210ENST00000541960 SOS2Q07890 1332 aaPredicted RBP22.34■■□□□ 1.17
GABARAPL1-210ENST00000541960 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
GABARAPL1-210ENST00000541960 PTPRCP08575 1304 aa22.33■■□□□ 1.17
GABARAPL1-210ENST00000541960 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
GABARAPL1-210ENST00000541960 FAM161AQ3B820 660 aa22.33■■□□□ 1.16
GABARAPL1-210ENST00000541960 NLRP2Q9NX02 1062 aa22.32■■□□□ 1.16
GABARAPL1-210ENST00000541960 CPDO75976 1380 aa22.31■■□□□ 1.16
GABARAPL1-210ENST00000541960 SMC5Q8IY18 1101 aa22.31■■□□□ 1.16
GABARAPL1-210ENST00000541960 NECTIN2Q92692 538 aa22.31■■□□□ 1.16
GABARAPL1-210ENST00000541960 RNMTO43148 476 aaKnown RBP22.3■■□□□ 1.16
GABARAPL1-210ENST00000541960 KCNQ3O43525 872 aa22.3■■□□□ 1.16
GABARAPL1-210ENST00000541960 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
GABARAPL1-210ENST00000541960 SIRT2Q8IXJ6 389 aa22.3■■□□□ 1.16
GABARAPL1-210ENST00000541960 C1orf141Q5JVX7 400 aa22.29■■□□□ 1.16
GABARAPL1-210ENST00000541960 ABCC6O95255 1503 aa22.29■■□□□ 1.16
GABARAPL1-210ENST00000541960 MEGF6O75095 1541 aa22.28■■□□□ 1.16
GABARAPL1-210ENST00000541960 VIRMAQ69YN4 1812 aaKnown RBP22.28■■□□□ 1.16
GABARAPL1-210ENST00000541960 CHMP4BQ9H444 224 aaKnown RBP22.28■■□□□ 1.16
GABARAPL1-210ENST00000541960 EIF4A1P60842 406 aaKnown RBP22.28■■□□□ 1.16
GABARAPL1-210ENST00000541960 CCDC30Q5VVM6 783 aa22.27■■□□□ 1.16
GABARAPL1-210ENST00000541960 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
GABARAPL1-210ENST00000541960 F6X3S4 739 aa22.27■■□□□ 1.16
GABARAPL1-210ENST00000541960 TEFQ10587 303 aa22.27■■□□□ 1.15
GABARAPL1-210ENST00000541960 SOS1Q07889 1333 aaPredicted RBP22.26■■□□□ 1.15
GABARAPL1-210ENST00000541960 STK31Q9BXU1 1019 aa22.26■■□□□ 1.15
GABARAPL1-210ENST00000541960 CSB-PGBD3P0DP91 1061 aa22.26■■□□□ 1.15
GABARAPL1-210ENST00000541960 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms