RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PCNTO95613 3336 aa14.29□□□□□ -0.12
CHFR-220ENST00000541817 NSD2O96028 1365 aa14.28□□□□□ -0.12
CHFR-220ENST00000541817 TTC21BQ7Z4L5 1316 aa14.28□□□□□ -0.12
CHFR-220ENST00000541817 C16orf71Q8IYS4 520 aaPredicted RBP14.28□□□□□ -0.12
CHFR-220ENST00000541817 RBM46Q8TBY0 533 aaKnown RBP14.28□□□□□ -0.12
CHFR-220ENST00000541817 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
CHFR-220ENST00000541817 NFAT5O94916 1531 aa14.27□□□□□ -0.12
CHFR-220ENST00000541817 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.13
CHFR-220ENST00000541817 ERBB3P21860 1342 aa14.26□□□□□ -0.13
CHFR-220ENST00000541817 ARHGAP27Q6ZUM4 889 aa14.26□□□□□ -0.13
CHFR-220ENST00000541817 AMIGO3Q86WK7 504 aa14.26□□□□□ -0.13
CHFR-220ENST00000541817 QRICH2Q9H0J4 1663 aa14.26□□□□□ -0.13
CHFR-220ENST00000541817 NBPF1Q3BBV0 1214 aa14.25□□□□□ -0.13
CHFR-220ENST00000541817 PHF14O94880 888 aa14.24□□□□□ -0.13
CHFR-220ENST00000541817 BCS1LQ9Y276 419 aa14.24□□□□□ -0.13
CHFR-220ENST00000541817 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
CHFR-220ENST00000541817 FSTL1Q12841 308 aa14.23□□□□□ -0.13
CHFR-220ENST00000541817 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
CHFR-220ENST00000541817 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
CHFR-220ENST00000541817 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
CHFR-220ENST00000541817 RRAGCQ9HB90 399 aa14.22□□□□□ -0.13
CHFR-220ENST00000541817 C5P01031 1676 aa14.22□□□□□ -0.13
CHFR-220ENST00000541817 LTN1O94822 1766 aa14.22□□□□□ -0.13
CHFR-220ENST00000541817 CENPJQ9HC77 1338 aaPredicted RBP14.21□□□□□ -0.13
CHFR-220ENST00000541817 USP47Q96K76 1375 aa14.21□□□□□ -0.14
CHFR-220ENST00000541817 KCPQ6ZWJ8 1503 aa14.2□□□□□ -0.14
CHFR-220ENST00000541817 USP54Q70EL1 1684 aa14.2□□□□□ -0.14
CHFR-220ENST00000541817 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
CHFR-220ENST00000541817 C9orf131Q5VYM1 1079 aa14.2□□□□□ -0.14
CHFR-220ENST00000541817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHFR-220ENST00000541817 TAF1LQ8IZX4 1826 aa14.19□□□□□ -0.14
CHFR-220ENST00000541817 FAM161AQ3B820 660 aa14.18□□□□□ -0.14
CHFR-220ENST00000541817 FLAD1Q8NFF5 587 aa14.18□□□□□ -0.14
CHFR-220ENST00000541817 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
CHFR-220ENST00000541817 TTC21AQ8NDW8 1320 aa14.17□□□□□ -0.14
CHFR-220ENST00000541817 NME9Q86XW9 330 aa14.17□□□□□ -0.14
CHFR-220ENST00000541817 AK7Q96M32 723 aa14.17□□□□□ -0.14
CHFR-220ENST00000541817 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
CHFR-220ENST00000541817 PXDNLA1KZ92 1463 aa14.17□□□□□ -0.14
CHFR-220ENST00000541817 KIAA1551Q9HCM1 1747 aa14.16□□□□□ -0.14
CHFR-220ENST00000541817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
CHFR-220ENST00000541817 FCHSD2O94868 740 aa14.16□□□□□ -0.14
CHFR-220ENST00000541817 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
CHFR-220ENST00000541817 RGPD2P0DJD1 1756 aa14.15□□□□□ -0.14
CHFR-220ENST00000541817 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
CHFR-220ENST00000541817 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
CHFR-220ENST00000541817 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
CHFR-220ENST00000541817 KTN1Q86UP2 1357 aaKnown RBP14.14□□□□□ -0.15
CHFR-220ENST00000541817 DPEP1P16444 411 aa14.14□□□□□ -0.15
CHFR-220ENST00000541817 SMC1BQ8NDV3 1235 aa14.14□□□□□ -0.15
CHFR-220ENST00000541817 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
CHFR-220ENST00000541817 STAC3Q96MF2 364 aa14.13□□□□□ -0.15
CHFR-220ENST00000541817 KDM2BQ8NHM5 1336 aa14.13□□□□□ -0.15
CHFR-220ENST00000541817 PALLDQ8WX93 1383 aa14.12□□□□□ -0.15
CHFR-220ENST00000541817 FOXN1O15353 648 aa14.12□□□□□ -0.15
CHFR-220ENST00000541817 MMP10P09238 476 aa14.12□□□□□ -0.15
CHFR-220ENST00000541817 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
CHFR-220ENST00000541817 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
CHFR-220ENST00000541817 MEGF6O75095 1541 aa14.11□□□□□ -0.15
CHFR-220ENST00000541817 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
CHFR-220ENST00000541817 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
CHFR-220ENST00000541817 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
CHFR-220ENST00000541817 MKRN1Q9UHC7 482 aaKnown RBP14.1□□□□□ -0.15
CHFR-220ENST00000541817 KIF13BQ9NQT8 1826 aa14.1□□□□□ -0.15
CHFR-220ENST00000541817 FBLN1P23142 703 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 TGFB2P61812 414 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 LINC00116Q8NCU8 138 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 IP6K1Q92551 441 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
CHFR-220ENST00000541817 TNRC6CQ9HCJ0 1690 aaKnown RBP14.08□□□□□ -0.16
CHFR-220ENST00000541817 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
CHFR-220ENST00000541817 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
CHFR-220ENST00000541817 BRCA1P38398 1863 aaKnown RBP14.07□□□□□ -0.16
CHFR-220ENST00000541817 GNPATO15228 680 aa14.06□□□□□ -0.16
CHFR-220ENST00000541817 KCNA3P22001 575 aa14.06□□□□□ -0.16
CHFR-220ENST00000541817 SSFA2P28290 1259 aa14.06□□□□□ -0.16
CHFR-220ENST00000541817 C10orf71Q711Q0 1435 aa14.06□□□□□ -0.16
CHFR-220ENST00000541817 SBF1O95248 1867 aa14.06□□□□□ -0.16
CHFR-220ENST00000541817 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
CHFR-220ENST00000541817 ITGB4P16144 1822 aa14.04□□□□□ -0.16
CHFR-220ENST00000541817 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
CHFR-220ENST00000541817 RASSF7Q02833 373 aa14.04□□□□□ -0.16
CHFR-220ENST00000541817 ABHD8Q96I13 439 aa14.04□□□□□ -0.16
CHFR-220ENST00000541817 ITPK1Q13572 414 aa14.03□□□□□ -0.16
CHFR-220ENST00000541817 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
CHFR-220ENST00000541817 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
CHFR-220ENST00000541817 PRDM10Q9NQV6 1147 aa14.03□□□□□ -0.16
CHFR-220ENST00000541817 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
CHFR-220ENST00000541817 HOXC9P31274 260 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 LBX1P52954 281 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 PIGBQ92521 554 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 DCAF5Q96JK2 942 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 CCDC87Q9NVE4 849 aa14.02□□□□□ -0.17
CHFR-220ENST00000541817 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
CHFR-220ENST00000541817 LOC102724428A0A0B4J2F2 783 aa14.01□□□□□ -0.17
CHFR-220ENST00000541817 VEGFAP15692 232 aaPredicted RBP14.01□□□□□ -0.17
CHFR-220ENST00000541817 SIK1P57059 783 aa14.01□□□□□ -0.17
CHFR-220ENST00000541817 TMF1P82094 1093 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms