RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SCARB1-207ENST00000541661 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
SCARB1-207ENST00000541661 NSD2O96028 1365 aa18.45■□□□□ 0.54
SCARB1-207ENST00000541661 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
SCARB1-207ENST00000541661 FBLN1P23142 703 aa18.44■□□□□ 0.54
SCARB1-207ENST00000541661 AMPHP49418 695 aa18.44■□□□□ 0.54
SCARB1-207ENST00000541661 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
SCARB1-207ENST00000541661 POLD1P28340 1107 aa18.42■□□□□ 0.54
SCARB1-207ENST00000541661 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-207ENST00000541661 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
SCARB1-207ENST00000541661 MEGF6O75095 1541 aa18.42■□□□□ 0.54
SCARB1-207ENST00000541661 KCNQ4P56696 695 aa18.41■□□□□ 0.54
SCARB1-207ENST00000541661 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
SCARB1-207ENST00000541661 FYB1O15117 783 aa18.4■□□□□ 0.54
SCARB1-207ENST00000541661 GPR162Q16538 588 aa18.4■□□□□ 0.54
SCARB1-207ENST00000541661 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
SCARB1-207ENST00000541661 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
SCARB1-207ENST00000541661 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SCARB1-207ENST00000541661 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
SCARB1-207ENST00000541661 GOLGB1Q14789 3259 aaKnown RBP18.38■□□□□ 0.53
SCARB1-207ENST00000541661 USP47Q96K76 1375 aa18.36■□□□□ 0.53
SCARB1-207ENST00000541661 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
SCARB1-207ENST00000541661 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
SCARB1-207ENST00000541661 INSRP06213 1382 aa18.35■□□□□ 0.53
SCARB1-207ENST00000541661 C1QTNF8P60827 252 aa18.35■□□□□ 0.53
SCARB1-207ENST00000541661 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
SCARB1-207ENST00000541661 KIF24Q5T7B8 1368 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 HMGB2P26583 209 aaKnown RBP18.34■□□□□ 0.53
SCARB1-207ENST00000541661 TMF1P82094 1093 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-207ENST00000541661 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 NLGN2Q8NFZ4 835 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 C5P01031 1676 aa18.34■□□□□ 0.53
SCARB1-207ENST00000541661 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-207ENST00000541661 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.52
SCARB1-207ENST00000541661 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SCARB1-207ENST00000541661 FLT4P35916 1363 aa18.31■□□□□ 0.52
SCARB1-207ENST00000541661 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
SCARB1-207ENST00000541661 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
SCARB1-207ENST00000541661 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
SCARB1-207ENST00000541661 ITGB4P16144 1822 aa18.29■□□□□ 0.52
SCARB1-207ENST00000541661 MSH5O43196 834 aa18.29■□□□□ 0.52
SCARB1-207ENST00000541661 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
SCARB1-207ENST00000541661 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
SCARB1-207ENST00000541661 FLAD1Q8NFF5 587 aa18.29■□□□□ 0.52
SCARB1-207ENST00000541661 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
SCARB1-207ENST00000541661 CYP27B1O15528 508 aa18.28■□□□□ 0.52
SCARB1-207ENST00000541661 YBX3P16989 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCARB1-207ENST00000541661 PKD1L3Q7Z443 1732 aa18.28■□□□□ 0.52
SCARB1-207ENST00000541661 PALLDQ8WX93 1383 aa18.28■□□□□ 0.52
SCARB1-207ENST00000541661 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
SCARB1-207ENST00000541661 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
SCARB1-207ENST00000541661 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
SCARB1-207ENST00000541661 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
SCARB1-207ENST00000541661 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
SCARB1-207ENST00000541661 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-207ENST00000541661 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-207ENST00000541661 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
SCARB1-207ENST00000541661 SMARCC1Q92922 1105 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-207ENST00000541661 C4BP0C0L5 1744 aa18.25■□□□□ 0.51
SCARB1-207ENST00000541661 ANKRD26Q9UPS8 1709 aa18.24■□□□□ 0.51
SCARB1-207ENST00000541661 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
SCARB1-207ENST00000541661 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
SCARB1-207ENST00000541661 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
SCARB1-207ENST00000541661 PIGBQ92521 554 aa18.22■□□□□ 0.51
SCARB1-207ENST00000541661 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
SCARB1-207ENST00000541661 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SCARB1-207ENST00000541661 AK7Q96M32 723 aa18.2■□□□□ 0.5
SCARB1-207ENST00000541661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCARB1-207ENST00000541661 SPG7Q9UQ90 795 aa18.2■□□□□ 0.5
SCARB1-207ENST00000541661 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
SCARB1-207ENST00000541661 EYA1Q99502 592 aa18.18■□□□□ 0.5
SCARB1-207ENST00000541661 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
SCARB1-207ENST00000541661 SSFA2P28290 1259 aa18.17■□□□□ 0.5
SCARB1-207ENST00000541661 SIK1P57059 783 aa18.17■□□□□ 0.5
SCARB1-207ENST00000541661 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
SCARB1-207ENST00000541661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
SCARB1-207ENST00000541661 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-207ENST00000541661 LINC00116Q8NCU8 138 aa18.15■□□□□ 0.5
SCARB1-207ENST00000541661 TMOD3Q9NYL9 352 aa18.15■□□□□ 0.5
SCARB1-207ENST00000541661 POLKQ9UBT6 870 aa18.15■□□□□ 0.5
SCARB1-207ENST00000541661 ADCY9O60503 1353 aa18.15■□□□□ 0.5
SCARB1-207ENST00000541661 PHF14O94880 888 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 PHKG2P15735 406 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 PLEKHG2Q9H7P9 1386 aa18.14■□□□□ 0.49
SCARB1-207ENST00000541661 CEP350Q5VT06 3117 aa18.13■□□□□ 0.49
SCARB1-207ENST00000541661 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
SCARB1-207ENST00000541661 ITPK1Q13572 414 aa18.12■□□□□ 0.49
SCARB1-207ENST00000541661 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
SCARB1-207ENST00000541661 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
SCARB1-207ENST00000541661 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-207ENST00000541661 GPBP1L1Q9HC44 474 aaPredicted RBP18.11■□□□□ 0.49
SCARB1-207ENST00000541661 ZNF831Q5JPB2 1677 aa18.11■□□□□ 0.49
SCARB1-207ENST00000541661 GNPATO15228 680 aa18.1■□□□□ 0.49
SCARB1-207ENST00000541661 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms