RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 MRS2Q9HD23 443 aa18.56■□□□□ 0.56
MSRB3-210ENST00000541189 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
MSRB3-210ENST00000541189 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
MSRB3-210ENST00000541189 AMOTQ4VCS5 1084 aa18.55■□□□□ 0.56
MSRB3-210ENST00000541189 PLEKHO1Q53GL0 409 aaPredicted RBP18.55■□□□□ 0.56
MSRB3-210ENST00000541189 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
MSRB3-210ENST00000541189 RGPD1P0DJD0 1748 aa18.54■□□□□ 0.56
MSRB3-210ENST00000541189 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
MSRB3-210ENST00000541189 ILDR2Q71H61 639 aa18.54■□□□□ 0.56
MSRB3-210ENST00000541189 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
MSRB3-210ENST00000541189 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
MSRB3-210ENST00000541189 MARCH10Q8NA82 808 aaPredicted RBP18.53■□□□□ 0.56
MSRB3-210ENST00000541189 RGPD2P0DJD1 1756 aa18.53■□□□□ 0.56
MSRB3-210ENST00000541189 TNS2Q63HR2 1409 aa18.52■□□□□ 0.56
MSRB3-210ENST00000541189 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
MSRB3-210ENST00000541189 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
MSRB3-210ENST00000541189 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
MSRB3-210ENST00000541189 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
MSRB3-210ENST00000541189 MIER1Q8N108 512 aa18.51■□□□□ 0.55
MSRB3-210ENST00000541189 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
MSRB3-210ENST00000541189 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
MSRB3-210ENST00000541189 FAM196AQ6ZSG2 479 aa18.5■□□□□ 0.55
MSRB3-210ENST00000541189 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
MSRB3-210ENST00000541189 CYP27B1O15528 508 aa18.49■□□□□ 0.55
MSRB3-210ENST00000541189 PHACTR3Q96KR7 559 aa18.49■□□□□ 0.55
MSRB3-210ENST00000541189 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
MSRB3-210ENST00000541189 NEFMP07197 916 aa18.48■□□□□ 0.55
MSRB3-210ENST00000541189 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
MSRB3-210ENST00000541189 FAM182BQ5T319 152 aa18.48■□□□□ 0.55
MSRB3-210ENST00000541189 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
MSRB3-210ENST00000541189 PHKG2P15735 406 aa18.47■□□□□ 0.55
MSRB3-210ENST00000541189 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
MSRB3-210ENST00000541189 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
MSRB3-210ENST00000541189 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
MSRB3-210ENST00000541189 BCL9O00512 1426 aa18.47■□□□□ 0.55
MSRB3-210ENST00000541189 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
MSRB3-210ENST00000541189 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
MSRB3-210ENST00000541189 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
MSRB3-210ENST00000541189 RUNDC1Q96C34 613 aa18.45■□□□□ 0.54
MSRB3-210ENST00000541189 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
MSRB3-210ENST00000541189 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
MSRB3-210ENST00000541189 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
MSRB3-210ENST00000541189 DCAF5Q96JK2 942 aa18.42■□□□□ 0.54
MSRB3-210ENST00000541189 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
MSRB3-210ENST00000541189 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
MSRB3-210ENST00000541189 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
MSRB3-210ENST00000541189 GNAT3A8MTJ3 354 aa18.4■□□□□ 0.54
MSRB3-210ENST00000541189 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
MSRB3-210ENST00000541189 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
MSRB3-210ENST00000541189 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
MSRB3-210ENST00000541189 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
MSRB3-210ENST00000541189 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
MSRB3-210ENST00000541189 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
MSRB3-210ENST00000541189 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
MSRB3-210ENST00000541189 TRIM37O94972 964 aa18.38■□□□□ 0.53
MSRB3-210ENST00000541189 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
MSRB3-210ENST00000541189 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
MSRB3-210ENST00000541189 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
MSRB3-210ENST00000541189 KCNQ2O43526 872 aa18.37■□□□□ 0.53
MSRB3-210ENST00000541189 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
MSRB3-210ENST00000541189 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
MSRB3-210ENST00000541189 RNMTO43148 476 aaKnown RBP18.36■□□□□ 0.53
MSRB3-210ENST00000541189 RIPK4P57078 832 aa18.36■□□□□ 0.53
MSRB3-210ENST00000541189 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
MSRB3-210ENST00000541189 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
MSRB3-210ENST00000541189 SHANK3Q9BYB0 1731 aa18.35■□□□□ 0.53
MSRB3-210ENST00000541189 APAF1O14727 1248 aa18.35■□□□□ 0.53
MSRB3-210ENST00000541189 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
MSRB3-210ENST00000541189 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
MSRB3-210ENST00000541189 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
MSRB3-210ENST00000541189 CABP4P57796 275 aa18.34■□□□□ 0.53
MSRB3-210ENST00000541189 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
MSRB3-210ENST00000541189 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
MSRB3-210ENST00000541189 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
MSRB3-210ENST00000541189 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
MSRB3-210ENST00000541189 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
MSRB3-210ENST00000541189 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
MSRB3-210ENST00000541189 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
MSRB3-210ENST00000541189 PIGBQ92521 554 aa18.32■□□□□ 0.52
MSRB3-210ENST00000541189 SLC52A2Q9HAB3 445 aa18.32■□□□□ 0.52
MSRB3-210ENST00000541189 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
MSRB3-210ENST00000541189 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
MSRB3-210ENST00000541189 APBA3O96018 575 aa18.31■□□□□ 0.52
MSRB3-210ENST00000541189 MCM10Q7L590 875 aa18.31■□□□□ 0.52
MSRB3-210ENST00000541189 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
MSRB3-210ENST00000541189 SOCS7O14512 581 aa18.29■□□□□ 0.52
MSRB3-210ENST00000541189 PLSCR1O15162 318 aa18.29■□□□□ 0.52
MSRB3-210ENST00000541189 TEFQ10587 303 aa18.29■□□□□ 0.52
MSRB3-210ENST00000541189 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
MSRB3-210ENST00000541189 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
MSRB3-210ENST00000541189 BAG6P46379 1132 aa18.28■□□□□ 0.52
MSRB3-210ENST00000541189 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
MSRB3-210ENST00000541189 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
MSRB3-210ENST00000541189 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
MSRB3-210ENST00000541189 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
MSRB3-210ENST00000541189 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
MSRB3-210ENST00000541189 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
MSRB3-210ENST00000541189 ASAP1Q9ULH1 1129 aa18.25■□□□□ 0.51
MSRB3-210ENST00000541189 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
MSRB3-210ENST00000541189 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms