RNA–Protein interactions for RNA: ENST00000541013.2

GOLGA3-206, Transcript of golgin A3, humanhuman

TSL 3

Gene GOLGA3, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-206ENST00000541013 NBPF6Q5VWK0 638 aa21.58■■□□□ 1.05
GOLGA3-206ENST00000541013 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
GOLGA3-206ENST00000541013 NBPF4Q96M43 638 aa21.58■■□□□ 1.05
GOLGA3-206ENST00000541013 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
GOLGA3-206ENST00000541013 KCNQ2O43526 872 aa21.54■■□□□ 1.04
GOLGA3-206ENST00000541013 MEGF6O75095 1541 aa21.54■■□□□ 1.04
GOLGA3-206ENST00000541013 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
GOLGA3-206ENST00000541013 NBPF14Q5TI25 921 aa21.52■■□□□ 1.04
GOLGA3-206ENST00000541013 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
GOLGA3-206ENST00000541013 SHANK3Q9BYB0 1731 aa21.51■■□□□ 1.03
GOLGA3-206ENST00000541013 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
GOLGA3-206ENST00000541013 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
GOLGA3-206ENST00000541013 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
GOLGA3-206ENST00000541013 TXNRD1Q16881 649 aa21.48■■□□□ 1.03
GOLGA3-206ENST00000541013 EYA1Q99502 592 aa21.48■■□□□ 1.03
GOLGA3-206ENST00000541013 NCAPD2Q15021 1401 aa21.47■■□□□ 1.03
GOLGA3-206ENST00000541013 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
GOLGA3-206ENST00000541013 MTHFSP49914 203 aa21.45■■□□□ 1.02
GOLGA3-206ENST00000541013 DDX10Q13206 875 aaKnown RBP21.43■■□□□ 1.02
GOLGA3-206ENST00000541013 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
GOLGA3-206ENST00000541013 CASZ1Q86V15 1759 aa21.42■■□□□ 1.02
GOLGA3-206ENST00000541013 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
GOLGA3-206ENST00000541013 RAPGEF4Q8WZA2 1011 aa21.42■■□□□ 1.02
GOLGA3-206ENST00000541013 BTAF1O14981 1849 aa21.41■■□□□ 1.02
GOLGA3-206ENST00000541013 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
GOLGA3-206ENST00000541013 IL13P35225 146 aa21.4■■□□□ 1.02
GOLGA3-206ENST00000541013 PDGFDQ9GZP0 370 aaPredicted RBP21.4■■□□□ 1.02
GOLGA3-206ENST00000541013 PKD1L3Q7Z443 1732 aa21.4■■□□□ 1.02
GOLGA3-206ENST00000541013 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.02
GOLGA3-206ENST00000541013 TATP17735 454 aaPredicted RBP21.39■■□□□ 1.01
GOLGA3-206ENST00000541013 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
GOLGA3-206ENST00000541013 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
GOLGA3-206ENST00000541013 PAPPAQ13219 1627 aa21.39■■□□□ 1.01
GOLGA3-206ENST00000541013 KAT6BQ8WYB5 2073 aa21.38■■□□□ 1.01
GOLGA3-206ENST00000541013 LRRC4BQ9NT99 713 aa21.38■■□□□ 1.01
GOLGA3-206ENST00000541013 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
GOLGA3-206ENST00000541013 DOT1LQ8TEK3 1739 aa21.37■■□□□ 1.01
GOLGA3-206ENST00000541013 CYP27B1O15528 508 aa21.35■■□□□ 1.01
GOLGA3-206ENST00000541013 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
GOLGA3-206ENST00000541013 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
GOLGA3-206ENST00000541013 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
GOLGA3-206ENST00000541013 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
GOLGA3-206ENST00000541013 PTGER2P43116 358 aa21.32■■□□□ 1
GOLGA3-206ENST00000541013 SULT6B1Q6IMI4 303 aa21.32■■□□□ 1
GOLGA3-206ENST00000541013 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
GOLGA3-206ENST00000541013 SLC27A3Q5K4L6 730 aa21.31■■□□□ 1
GOLGA3-206ENST00000541013 AKT1S1Q96B36 256 aa21.31■■□□□ 1
GOLGA3-206ENST00000541013 KDRP35968 1356 aa21.31■■□□□ 1
GOLGA3-206ENST00000541013 PCDH11XQ9BZA7 1347 aa21.3■■□□□ 1
GOLGA3-206ENST00000541013 PCDH11YQ9BZA8 1340 aa21.3■■□□□ 1
GOLGA3-206ENST00000541013 HMOX1P09601 288 aa21.3■■□□□ 1
GOLGA3-206ENST00000541013 ZNF827Q17R98 1081 aa21.3■■□□□ 1
GOLGA3-206ENST00000541013 SGIP1Q9BQI5 828 aa21.3■■□□□ 1
GOLGA3-206ENST00000541013 LY75O60449 1722 aa21.29■■□□□ 1
GOLGA3-206ENST00000541013 SPG7Q9UQ90 795 aa21.28■■□□□ 1
GOLGA3-206ENST00000541013 ZBTB7AO95365 584 aa21.27■■□□□ 1
GOLGA3-206ENST00000541013 NKX1-1Q15270 411 aaPredicted RBP21.27■■□□□ 1
GOLGA3-206ENST00000541013 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
GOLGA3-206ENST00000541013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.26■□□□□ 0.992e-6■■□□□ 13.2
GOLGA3-206ENST00000541013 PHKG2P15735 406 aa21.25■□□□□ 0.99
GOLGA3-206ENST00000541013 ITGB4P16144 1822 aa21.25■□□□□ 0.99
GOLGA3-206ENST00000541013 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
GOLGA3-206ENST00000541013 U2SURPO15042 1029 aaKnown RBP21.24■□□□□ 0.99
GOLGA3-206ENST00000541013 MTFR1LQ9H019 292 aa21.24■□□□□ 0.99
GOLGA3-206ENST00000541013 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
GOLGA3-206ENST00000541013 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
GOLGA3-206ENST00000541013 KCNQ4P56696 695 aa21.23■□□□□ 0.99
GOLGA3-206ENST00000541013 PLEKHO1Q53GL0 409 aaPredicted RBP21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 ZNF530Q6P9A1 599 aaPredicted RBP21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 PPP1R1BQ9UD71 204 aaPredicted RBP21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 PLEKHG2Q9H7P9 1386 aa21.21■□□□□ 0.99
GOLGA3-206ENST00000541013 COL24A1Q17RW2 1714 aa21.2■□□□□ 0.98
GOLGA3-206ENST00000541013 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
GOLGA3-206ENST00000541013 MPRIPQ6WCQ1 1025 aa21.19■□□□□ 0.98
GOLGA3-206ENST00000541013 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
GOLGA3-206ENST00000541013 RALBP1Q15311 655 aa21.18■□□□□ 0.98
GOLGA3-206ENST00000541013 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
GOLGA3-206ENST00000541013 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
GOLGA3-206ENST00000541013 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
GOLGA3-206ENST00000541013 PIGBQ92521 554 aa21.17■□□□□ 0.98
GOLGA3-206ENST00000541013 MTHFSDQ2M296 383 aaKnown RBP21.16■□□□□ 0.98
GOLGA3-206ENST00000541013 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
GOLGA3-206ENST00000541013 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
GOLGA3-206ENST00000541013 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
GOLGA3-206ENST00000541013 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
GOLGA3-206ENST00000541013 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
GOLGA3-206ENST00000541013 SYT17Q9BSW7 474 aa21.14■□□□□ 0.97
GOLGA3-206ENST00000541013 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
GOLGA3-206ENST00000541013 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 C1orf141Q5JVX7 400 aa21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 SCN11AQ9UI33 1791 aa21.13■□□□□ 0.97
GOLGA3-206ENST00000541013 MAP3K5Q99683 1374 aa21.12■□□□□ 0.97
GOLGA3-206ENST00000541013 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
GOLGA3-206ENST00000541013 DCAF5Q96JK2 942 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms