RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-214ENST00000540865 IFFO2Q5TF58 517 aa7.06□□□□□ -1.28
SNHG1-214ENST00000540865 CCDC9Q9Y3X0 531 aaKnown RBP7.06□□□□□ -1.28
SNHG1-214ENST00000540865 E9PCH4 1651 aa7.06□□□□□ -1.28
SNHG1-214ENST00000540865 IQGAP3Q86VI3 1631 aa7.05□□□□□ -1.28
SNHG1-214ENST00000540865 SPHKAPQ2M3C7 1700 aa7.05□□□□□ -1.28
SNHG1-214ENST00000540865 PHF14O94880 888 aa7.05□□□□□ -1.28
SNHG1-214ENST00000540865 PRKCSHP14314 528 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-214ENST00000540865 SMYD5Q6GMV2 418 aa7.05□□□□□ -1.28
SNHG1-214ENST00000540865 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.04□□□□□ -1.28
SNHG1-214ENST00000540865 DISP2A7MBM2 1401 aa7.04□□□□□ -1.28
SNHG1-214ENST00000540865 TULP1O00294 542 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-214ENST00000540865 KRT28Q7Z3Y7 464 aa7.04□□□□□ -1.28
SNHG1-214ENST00000540865 RPGRIP1LQ68CZ1 1315 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 CCDC144AA2RUR9 1427 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 UTRNP46939 3433 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 NEXMIFQ5QGS0 1516 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 LOC105371045A0A1W2PR82 267 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 MYT1Q01538 1121 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 PSME1Q06323 249 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 FAM98CQ17RN3 349 aaKnown RBP7.03□□□□□ -1.28
SNHG1-214ENST00000540865 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
SNHG1-214ENST00000540865 TPRNQ4KMQ1 711 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 TYW1BQ6NUM6 668 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 WNT2BQ93097 391 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 ADAM33Q9BZ11 813 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 CDHR5Q9HBB8 845 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 CDC42BPGQ6DT37 1551 aa7.03□□□□□ -1.28
SNHG1-214ENST00000540865 NAIPQ13075 1403 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 NUTM2FA1L443 756 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 FAM83GA6ND36 823 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 MAP3K7O43318 606 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 EZH2Q15910 746 aaKnown RBP7.02□□□□□ -1.29
SNHG1-214ENST00000540865 ZDHHC16Q969W1 377 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 CAMKK2Q96RR4 588 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 EPAS1Q99814 870 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 BCL2L12Q9HB09 334 aa7.02□□□□□ -1.29
SNHG1-214ENST00000540865 SBNO1A3KN83 1393 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 PARD3Q8TEW0 1356 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 GOLGA8CPA6NN73 597 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 BHMG1C9JSJ3 638 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-214ENST00000540865 GPIHBP1Q8IV16 184 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 CABLES1Q8TDN4 633 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 TNS3Q68CZ2 1445 aa7.01□□□□□ -1.29
SNHG1-214ENST00000540865 ARHGEF10O15013 1369 aa7□□□□□ -1.29
SNHG1-214ENST00000540865 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
SNHG1-214ENST00000540865 MRPL50Q8N5N7 158 aaKnown RBP7□□□□□ -1.29
SNHG1-214ENST00000540865 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
SNHG1-214ENST00000540865 USP32Q8NFA0 1604 aa7□□□□□ -1.29
SNHG1-214ENST00000540865 MARF1Q9Y4F3 1742 aaKnown RBP6.99□□□□□ -1.29
SNHG1-214ENST00000540865 ABCC11Q96J66 1382 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 NINLQ9Y2I6 1382 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 PTPREP23469 700 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 NBPF8Q3BBV2 869 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 FAM182BQ5T319 152 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 NBPF14Q5TI25 921 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 FAM196AQ6ZSG2 479 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 ZC3H15Q8WU90 426 aaKnown RBP6.99□□□□□ -1.29
SNHG1-214ENST00000540865 FBXW7Q969H0 707 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 ZBED2Q9BTP6 218 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 BTG4Q9NY30 223 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 STK26Q9P289 416 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 PPP1R1BQ9UD71 204 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-214ENST00000540865 TECPR2O15040 1411 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 BRWD3Q6RI45 1802 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 SPATA31A5Q5VU36 1347 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 SPATA31A7Q8IWB4 1347 aa6.99□□□□□ -1.29
SNHG1-214ENST00000540865 TRIM37O94972 964 aa6.98□□□□□ -1.29
SNHG1-214ENST00000540865 APBA3O96018 575 aa6.98□□□□□ -1.29
SNHG1-214ENST00000540865 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
SNHG1-214ENST00000540865 SIRT1Q96EB6 747 aa6.98□□□□□ -1.29
SNHG1-214ENST00000540865 SPON1Q9HCB6 807 aa6.98□□□□□ -1.29
SNHG1-214ENST00000540865 GPR37O15354 613 aa6.97□□□□□ -1.29
SNHG1-214ENST00000540865 KCNQ2O43526 872 aa6.97□□□□□ -1.29
SNHG1-214ENST00000540865 COL9A1P20849 921 aa6.97□□□□□ -1.29
SNHG1-214ENST00000540865 Q6ZNB5 142 aa6.97□□□□□ -1.29
SNHG1-214ENST00000540865 ZNF784Q8NCA9 323 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-214ENST00000540865 CLTCL1P53675 1640 aa6.97□□□□□ -1.29
SNHG1-214ENST00000540865 PLEKHH1Q9ULM0 1364 aa6.96□□□□□ -1.29
SNHG1-214ENST00000540865 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.29
SNHG1-214ENST00000540865 SENP3-EIF4A1A0A087X0R7 540 aa6.96□□□□□ -1.3
SNHG1-214ENST00000540865 NBPF3Q9H094 633 aa6.96□□□□□ -1.3
SNHG1-214ENST00000540865 NPDC1Q9NQX5 325 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-214ENST00000540865 ADGRF5Q8IZF2 1346 aa6.96□□□□□ -1.3
SNHG1-214ENST00000540865 CEP350Q5VT06 3117 aa6.96□□□□□ -1.3
SNHG1-214ENST00000540865 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
SNHG1-214ENST00000540865 FECHP22830 423 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 ITGAEP38570 1179 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 PTGDRQ13258 359 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 NRXN1Q9ULB1 1477 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 KIF1AQ12756 1690 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 RGPD1P0DJD0 1748 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 SPATA31A1Q5TZJ5 1347 aa6.95□□□□□ -1.3
SNHG1-214ENST00000540865 C1QTNF8P60827 252 aa6.94□□□□□ -1.3
SNHG1-214ENST00000540865 TMEM132EQ6IEE7 984 aa6.94□□□□□ -1.3
SNHG1-214ENST00000540865 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
SNHG1-214ENST00000540865 ANKRD30BQ9BXX2 1392 aa6.94□□□□□ -1.3
SNHG1-214ENST00000540865 PLCH1Q4KWH8 1693 aa6.93□□□□□ -1.3
SNHG1-214ENST00000540865 C11orf95C9JLR9 678 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-214ENST00000540865 FCHSD2O94868 740 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms