RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
MSRB3-209ENST00000540804 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
MSRB3-209ENST00000540804 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
MSRB3-209ENST00000540804 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
MSRB3-209ENST00000540804 INSRP06213 1382 aa20.09■□□□□ 0.81
MSRB3-209ENST00000540804 BTAF1O14981 1849 aa20.09■□□□□ 0.81
MSRB3-209ENST00000540804 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
MSRB3-209ENST00000540804 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
MSRB3-209ENST00000540804 NSD2O96028 1365 aa20.08■□□□□ 0.8
MSRB3-209ENST00000540804 FLT4P35916 1363 aa20.08■□□□□ 0.8
MSRB3-209ENST00000540804 PTGER2P43116 358 aa20.07■□□□□ 0.8
MSRB3-209ENST00000540804 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
MSRB3-209ENST00000540804 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
MSRB3-209ENST00000540804 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
MSRB3-209ENST00000540804 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
MSRB3-209ENST00000540804 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
MSRB3-209ENST00000540804 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
MSRB3-209ENST00000540804 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
MSRB3-209ENST00000540804 DOT1LQ8TEK3 1739 aa20.04■□□□□ 0.8
MSRB3-209ENST00000540804 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
MSRB3-209ENST00000540804 AKT1S1Q96B36 256 aa20.02■□□□□ 0.8
MSRB3-209ENST00000540804 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
MSRB3-209ENST00000540804 KIF24Q5T7B8 1368 aa20.01■□□□□ 0.79
MSRB3-209ENST00000540804 PANK3Q9H999 370 aa20.01■□□□□ 0.79
MSRB3-209ENST00000540804 CYP27B1O15528 508 aa20■□□□□ 0.79
MSRB3-209ENST00000540804 MTFR1LQ9H019 292 aa20■□□□□ 0.79
MSRB3-209ENST00000540804 SLC27A3Q5K4L6 730 aa19.99■□□□□ 0.79
MSRB3-209ENST00000540804 EYA1Q99502 592 aa19.99■□□□□ 0.79
MSRB3-209ENST00000540804 SGIP1Q9BQI5 828 aa19.99■□□□□ 0.79
MSRB3-209ENST00000540804 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
MSRB3-209ENST00000540804 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
MSRB3-209ENST00000540804 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
MSRB3-209ENST00000540804 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
MSRB3-209ENST00000540804 PNPLA7Q6ZV29 1317 aa19.97■□□□□ 0.79
MSRB3-209ENST00000540804 CCNL1Q9UK58 526 aaPredicted RBP19.96■□□□□ 0.79
MSRB3-209ENST00000540804 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
MSRB3-209ENST00000540804 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
MSRB3-209ENST00000540804 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
MSRB3-209ENST00000540804 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
MSRB3-209ENST00000540804 KAT6BQ8WYB5 2073 aa19.95■□□□□ 0.78
MSRB3-209ENST00000540804 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
MSRB3-209ENST00000540804 SYT17Q9BSW7 474 aa19.93■□□□□ 0.78
MSRB3-209ENST00000540804 ARXQ96QS3 562 aa19.92■□□□□ 0.78
MSRB3-209ENST00000540804 LY75O60449 1722 aa19.91■□□□□ 0.78
MSRB3-209ENST00000540804 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
MSRB3-209ENST00000540804 YY1P25490 414 aa19.9■□□□□ 0.78
MSRB3-209ENST00000540804 PIGBQ92521 554 aa19.9■□□□□ 0.78
MSRB3-209ENST00000540804 PALLDQ8WX93 1383 aa19.9■□□□□ 0.78
MSRB3-209ENST00000540804 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
MSRB3-209ENST00000540804 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
MSRB3-209ENST00000540804 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
MSRB3-209ENST00000540804 MSH5O43196 834 aa19.88■□□□□ 0.77
MSRB3-209ENST00000540804 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
MSRB3-209ENST00000540804 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
MSRB3-209ENST00000540804 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
MSRB3-209ENST00000540804 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
MSRB3-209ENST00000540804 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
MSRB3-209ENST00000540804 KLHL34Q8N239 644 aa19.87■□□□□ 0.77
MSRB3-209ENST00000540804 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
MSRB3-209ENST00000540804 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
MSRB3-209ENST00000540804 PHKG2P15735 406 aa19.86■□□□□ 0.77
MSRB3-209ENST00000540804 SLC16A10Q8TF71 515 aa19.86■□□□□ 0.77
MSRB3-209ENST00000540804 MSL1Q68DK7 614 aa19.85■□□□□ 0.77
MSRB3-209ENST00000540804 AMIGO3Q86WK7 504 aa19.85■□□□□ 0.77
MSRB3-209ENST00000540804 IGSF1Q8N6C5 1336 aa19.84■□□□□ 0.77
MSRB3-209ENST00000540804 AEBP1Q8IUX7 1158 aa19.84■□□□□ 0.77
MSRB3-209ENST00000540804 IFNL2Q8IZJ0 200 aa19.84■□□□□ 0.77
MSRB3-209ENST00000540804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.83■□□□□ 0.77
MSRB3-209ENST00000540804 ASAP1Q9ULH1 1129 aa19.83■□□□□ 0.77
MSRB3-209ENST00000540804 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.77
MSRB3-209ENST00000540804 QSER1Q2KHR3 1735 aa19.82■□□□□ 0.76
MSRB3-209ENST00000540804 POLD1P28340 1107 aa19.82■□□□□ 0.76
MSRB3-209ENST00000540804 UTRNP46939 3433 aa19.81■□□□□ 0.76
MSRB3-209ENST00000540804 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
MSRB3-209ENST00000540804 SMARCC1Q92922 1105 aaPredicted RBP19.81■□□□□ 0.76
MSRB3-209ENST00000540804 TMOD3Q9NYL9 352 aa19.81■□□□□ 0.76
MSRB3-209ENST00000540804 C5P01031 1676 aa19.81■□□□□ 0.76
MSRB3-209ENST00000540804 ITGB4P16144 1822 aa19.81■□□□□ 0.76
MSRB3-209ENST00000540804 LINC00116Q8NCU8 138 aa19.8■□□□□ 0.76
MSRB3-209ENST00000540804 NLGN2Q8NFZ4 835 aa19.8■□□□□ 0.76
MSRB3-209ENST00000540804 LOC102724428A0A0B4J2F2 783 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 PHF14O94880 888 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 SIK1P57059 783 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 ITPK1Q13572 414 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 ATG3Q9NT62 314 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 MAP3K5Q99683 1374 aa19.79■□□□□ 0.76
MSRB3-209ENST00000540804 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
MSRB3-209ENST00000540804 AK7Q96M32 723 aa19.78■□□□□ 0.76
MSRB3-209ENST00000540804 IL13P35225 146 aa19.77■□□□□ 0.76
MSRB3-209ENST00000540804 SULT6B1Q6IMI4 303 aa19.77■□□□□ 0.76
MSRB3-209ENST00000540804 COL24A1Q17RW2 1714 aa19.76■□□□□ 0.75
MSRB3-209ENST00000540804 PLEKHO1Q53GL0 409 aaPredicted RBP19.76■□□□□ 0.75
MSRB3-209ENST00000540804 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
MSRB3-209ENST00000540804 ZNF530Q6P9A1 599 aaPredicted RBP19.76■□□□□ 0.75
MSRB3-209ENST00000540804 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
MSRB3-209ENST00000540804 C4BP0C0L5 1744 aa19.76■□□□□ 0.75
MSRB3-209ENST00000540804 PER1O15534 1290 aaPredicted RBP19.75■□□□□ 0.75
MSRB3-209ENST00000540804 ATP6V1AP38606 617 aa19.75■□□□□ 0.75
MSRB3-209ENST00000540804 KDM6AO15550 1401 aaPredicted RBP19.75■□□□□ 0.75
MSRB3-209ENST00000540804 TAF1LQ8IZX4 1826 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms