RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CDCA7Q9BWT1 371 aaPredicted RBP8.03□□□□□ -1.12
MDM2-227ENST00000540709 H3BM21 787 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
MDM2-227ENST00000540709 ERVK-9P63128 1117 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 FLIIQ13045 1269 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
MDM2-227ENST00000540709 PRICKLE2Q7Z3G6 844 aa8.02□□□□□ -1.13
MDM2-227ENST00000540709 A0A1W2PRU2 124 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 OXLD1Q5BKU9 147 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 NPAS3Q8IXF0 933 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 RAB6BQ9NRW1 208 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 DOLKQ9UPQ8 538 aa8.01□□□□□ -1.13
MDM2-227ENST00000540709 RHOQP17081 205 aa8□□□□□ -1.13
MDM2-227ENST00000540709 GMPRP36959 345 aa8□□□□□ -1.13
MDM2-227ENST00000540709 LCE2CQ5TA81 110 aa8□□□□□ -1.13
MDM2-227ENST00000540709 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
MDM2-227ENST00000540709 RNF217Q8TC41 542 aa8□□□□□ -1.13
MDM2-227ENST00000540709 ARHGEF10LQ9HCE6 1279 aa8□□□□□ -1.13
MDM2-227ENST00000540709 ERBB4Q15303 1308 aa8□□□□□ -1.13
MDM2-227ENST00000540709 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
MDM2-227ENST00000540709 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
MDM2-227ENST00000540709 LYSMD3Q7Z3D4 306 aa7.99□□□□□ -1.13
MDM2-227ENST00000540709 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
MDM2-227ENST00000540709 CCDC155Q8N6L0 562 aa7.98□□□□□ -1.13
MDM2-227ENST00000540709 CDC14CA4D256 554 aa7.97□□□□□ -1.13
MDM2-227ENST00000540709 USP4Q13107 963 aa7.97□□□□□ -1.13
MDM2-227ENST00000540709 SOX11P35716 441 aa7.96□□□□□ -1.14
MDM2-227ENST00000540709 PHTF2Q8N3S3 785 aa7.96□□□□□ -1.14
MDM2-227ENST00000540709 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
MDM2-227ENST00000540709 POU4F2Q12837 409 aa7.95□□□□□ -1.14
MDM2-227ENST00000540709 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
MDM2-227ENST00000540709 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
MDM2-227ENST00000540709 CLUAP1Q96AJ1 413 aa7.95□□□□□ -1.14
MDM2-227ENST00000540709 SLC35F4A4IF30 521 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 PIK3CDO00329 1044 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 WIPF1O43516 503 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 TRAK2O60296 914 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 STAU1O95793 577 aaKnown RBP7.94□□□□□ -1.14
MDM2-227ENST00000540709 GNRH1P01148 92 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 SKIP12755 728 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 INSM1Q01101 510 aaPredicted RBP7.94□□□□□ -1.14
MDM2-227ENST00000540709 CLN3Q13286 438 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 VWA5B2Q8N398 1253 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 SIRT1Q96EB6 747 aa7.94□□□□□ -1.14
MDM2-227ENST00000540709 POM121CA8CG34 1229 aa7.93□□□□□ -1.14
MDM2-227ENST00000540709 RIPOR1Q6ZS17 1223 aa7.93□□□□□ -1.14
MDM2-227ENST00000540709 GAS2L1Q99501 681 aaPredicted RBP7.93□□□□□ -1.14
MDM2-227ENST00000540709 ITGA6P23229 1130 aa7.92□□□□□ -1.14
MDM2-227ENST00000540709 PHKA2P46019 1235 aa7.92□□□□□ -1.14
MDM2-227ENST00000540709 CENPCQ03188 943 aa7.92□□□□□ -1.14
MDM2-227ENST00000540709 SENP3-EIF4A1A0A087X0R7 540 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 IL2RAP01589 272 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 GTF2E1P29083 439 aaPredicted RBP7.91□□□□□ -1.14
MDM2-227ENST00000540709 GPC1P35052 558 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 MAP7D1Q3KQU3 841 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 ESCO1Q5FWF5 840 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
MDM2-227ENST00000540709 ESYT1Q9BSJ8 1104 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 ALG2Q9H553 416 aa7.91□□□□□ -1.14
MDM2-227ENST00000540709 TMEM214Q6NUQ4 689 aaKnown RBP7.9□□□□□ -1.14
MDM2-227ENST00000540709 SV2AQ7L0J3 742 aa7.9□□□□□ -1.14
MDM2-227ENST00000540709 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
MDM2-227ENST00000540709 ZSCAN10Q96SZ4 725 aaPredicted RBP7.9□□□□□ -1.14
MDM2-227ENST00000540709 VSIG8P0DPA2 414 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 PSME1Q06323 249 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 CNTNAP3BQ96NU0 1288 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 ETNK1Q9HBU6 452 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
MDM2-227ENST00000540709 TLR1Q15399 786 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 EML3Q32P44 896 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
MDM2-227ENST00000540709 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 ZSCAN1Q8NBB4 408 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 CUEDC1Q9NWM3 386 aaPredicted RBP7.88□□□□□ -1.15
MDM2-227ENST00000540709 SERTAD1Q9UHV2 236 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 CHIC2Q9UKJ5 165 aa7.88□□□□□ -1.15
MDM2-227ENST00000540709 WASLO00401 505 aaPredicted RBP7.87□□□□□ -1.15
MDM2-227ENST00000540709 GDF10P55107 478 aa7.87□□□□□ -1.15
MDM2-227ENST00000540709 GNASQ5JWF2 1037 aa7.87□□□□□ -1.15
MDM2-227ENST00000540709 PROSER2Q86WR7 435 aaPredicted RBP7.87□□□□□ -1.15
MDM2-227ENST00000540709 COL25A1Q9BXS0 654 aaPredicted RBP7.87□□□□□ -1.15
MDM2-227ENST00000540709 GPAMQ9HCL2 828 aa7.87□□□□□ -1.15
MDM2-227ENST00000540709 NCOA4Q13772 614 aa7.86□□□□□ -1.15
MDM2-227ENST00000540709 ADAMTS19Q8TE59 1207 aa7.86□□□□□ -1.15
MDM2-227ENST00000540709 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
MDM2-227ENST00000540709 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
MDM2-227ENST00000540709 USP17L5A8MUK1 530 aa7.85□□□□□ -1.15
MDM2-227ENST00000540709 GPR25O00155 361 aa7.85□□□□□ -1.15
MDM2-227ENST00000540709 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
MDM2-227ENST00000540709 DYRK1BQ9Y463 629 aa7.85□□□□□ -1.15
MDM2-227ENST00000540709 SPATA31C2B4DYI2 1134 aa7.84□□□□□ -1.15
MDM2-227ENST00000540709 GTF2IP78347 998 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms