RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
CDCA3-208ENST00000540683 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
CDCA3-208ENST00000540683 PCDH11XQ9BZA7 1347 aa14.23□□□□□ -0.13
CDCA3-208ENST00000540683 PCDH11YQ9BZA8 1340 aa14.23□□□□□ -0.13
CDCA3-208ENST00000540683 TXNRD1Q16881 649 aa14.23□□□□□ -0.13
CDCA3-208ENST00000540683 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
CDCA3-208ENST00000540683 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
CDCA3-208ENST00000540683 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
CDCA3-208ENST00000540683 PPP1R1BQ9UD71 204 aaPredicted RBP14.22□□□□□ -0.13
CDCA3-208ENST00000540683 KNSTRNQ9Y448 316 aa14.22□□□□□ -0.13
CDCA3-208ENST00000540683 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.13
CDCA3-208ENST00000540683 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
CDCA3-208ENST00000540683 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
CDCA3-208ENST00000540683 SPG7Q9UQ90 795 aa14.21□□□□□ -0.13
CDCA3-208ENST00000540683 KCNQ2O43526 872 aa14.2□□□□□ -0.14
CDCA3-208ENST00000540683 HSP90AB2PQ58FF8 381 aa14.2□□□□□ -0.14
CDCA3-208ENST00000540683 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
CDCA3-208ENST00000540683 PANK3Q9H999 370 aa14.2□□□□□ -0.14
CDCA3-208ENST00000540683 SYTL4Q96C24 671 aaPredicted RBP14.19□□□□□ -0.14
CDCA3-208ENST00000540683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDCA3-208ENST00000540683 MAP2P11137 1827 aaKnown RBP14.19□□□□□ -0.14
CDCA3-208ENST00000540683 BTAF1O14981 1849 aa14.18□□□□□ -0.14
CDCA3-208ENST00000540683 SLC15A2Q16348 729 aa14.18□□□□□ -0.14
CDCA3-208ENST00000540683 FBLN1P23142 703 aa14.17□□□□□ -0.14
CDCA3-208ENST00000540683 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
CDCA3-208ENST00000540683 EMILIN1Q9Y6C2 1016 aa14.17□□□□□ -0.14
CDCA3-208ENST00000540683 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
CDCA3-208ENST00000540683 MEGF6O75095 1541 aa14.16□□□□□ -0.14
CDCA3-208ENST00000540683 PRIM1P49642 420 aaKnown RBP14.16□□□□□ -0.14
CDCA3-208ENST00000540683 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
CDCA3-208ENST00000540683 PROM2Q8N271 834 aa14.15□□□□□ -0.14
CDCA3-208ENST00000540683 SLC16A10Q8TF71 515 aa14.15□□□□□ -0.14
CDCA3-208ENST00000540683 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
CDCA3-208ENST00000540683 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
CDCA3-208ENST00000540683 HSP90AB1P08238 724 aaKnown RBP14.14□□□□□ -0.15
CDCA3-208ENST00000540683 USHBP1Q8N6Y0 703 aa14.14□□□□□ -0.15
CDCA3-208ENST00000540683 NCAPD2Q15021 1401 aa14.14□□□□□ -0.15
CDCA3-208ENST00000540683 DOT1LQ8TEK3 1739 aa14.13□□□□□ -0.15
CDCA3-208ENST00000540683 PTF1AQ7RTS3 328 aa14.13□□□□□ -0.15
CDCA3-208ENST00000540683 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-208ENST00000540683 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
CDCA3-208ENST00000540683 IFNL2Q8IZJ0 200 aa14.12□□□□□ -0.15
CDCA3-208ENST00000540683 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
CDCA3-208ENST00000540683 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-208ENST00000540683 PKD1L3Q7Z443 1732 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 EYA1Q99502 592 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 SHANK3Q9BYB0 1731 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 TFCP2L1Q9NZI6 479 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 CCNL1Q9UK58 526 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-208ENST00000540683 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
CDCA3-208ENST00000540683 POLD1P28340 1107 aa14.1□□□□□ -0.15
CDCA3-208ENST00000540683 EIF4A2Q14240 407 aaKnown RBP14.1□□□□□ -0.15
CDCA3-208ENST00000540683 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
CDCA3-208ENST00000540683 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
CDCA3-208ENST00000540683 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
CDCA3-208ENST00000540683 MSH5O43196 834 aa14.09□□□□□ -0.15
CDCA3-208ENST00000540683 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
CDCA3-208ENST00000540683 LY75O60449 1722 aa14.09□□□□□ -0.15
CDCA3-208ENST00000540683 IGSF1Q8N6C5 1336 aa14.09□□□□□ -0.15
CDCA3-208ENST00000540683 MPRIPQ6WCQ1 1025 aa14.08□□□□□ -0.16
CDCA3-208ENST00000540683 TMOD3Q9NYL9 352 aa14.08□□□□□ -0.16
CDCA3-208ENST00000540683 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
CDCA3-208ENST00000540683 CYP27B1O15528 508 aa14.07□□□□□ -0.16
CDCA3-208ENST00000540683 ZBTB7AO95365 584 aa14.07□□□□□ -0.16
CDCA3-208ENST00000540683 C1orf141Q5JVX7 400 aa14.07□□□□□ -0.16
CDCA3-208ENST00000540683 ERVV-2B6SEH9 535 aa14.06□□□□□ -0.16
CDCA3-208ENST00000540683 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
CDCA3-208ENST00000540683 DCAF5Q96JK2 942 aa14.06□□□□□ -0.16
CDCA3-208ENST00000540683 LRRC4BQ9NT99 713 aa14.06□□□□□ -0.16
CDCA3-208ENST00000540683 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
CDCA3-208ENST00000540683 PHKG2P15735 406 aa14.05□□□□□ -0.16
CDCA3-208ENST00000540683 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-208ENST00000540683 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-208ENST00000540683 ARXQ96QS3 562 aa14.04□□□□□ -0.16
CDCA3-208ENST00000540683 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-208ENST00000540683 ZNF827Q17R98 1081 aa14.03□□□□□ -0.16
CDCA3-208ENST00000540683 AK7Q96M32 723 aa14.03□□□□□ -0.16
CDCA3-208ENST00000540683 MAP3K5Q99683 1374 aa14.03□□□□□ -0.16
CDCA3-208ENST00000540683 ITGB4P16144 1822 aa14.03□□□□□ -0.16
CDCA3-208ENST00000540683 C5P01031 1676 aa14.02□□□□□ -0.16
CDCA3-208ENST00000540683 PTGER2P43116 358 aa14.02□□□□□ -0.17
CDCA3-208ENST00000540683 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
CDCA3-208ENST00000540683 KDRP35968 1356 aa14.01□□□□□ -0.17
CDCA3-208ENST00000540683 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
CDCA3-208ENST00000540683 MTHFSP49914 203 aa14.01□□□□□ -0.17
CDCA3-208ENST00000540683 ZNF530Q6P9A1 599 aaPredicted RBP14.01□□□□□ -0.17
CDCA3-208ENST00000540683 PIGBQ92521 554 aa14.01□□□□□ -0.17
CDCA3-208ENST00000540683 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
CDCA3-208ENST00000540683 PNPLA7Q6ZV29 1317 aa14□□□□□ -0.17
CDCA3-208ENST00000540683 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
CDCA3-208ENST00000540683 PER1O15534 1290 aaPredicted RBP14□□□□□ -0.17
CDCA3-208ENST00000540683 SIK1P57059 783 aa14□□□□□ -0.17
CDCA3-208ENST00000540683 CABP4P57796 275 aa14□□□□□ -0.17
CDCA3-208ENST00000540683 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
CDCA3-208ENST00000540683 IL13P35225 146 aa13.99□□□□□ -0.17
CDCA3-208ENST00000540683 CC2D1BQ5T0F9 858 aaKnown RBP13.99□□□□□ -0.17
CDCA3-208ENST00000540683 SSFA2P28290 1259 aa13.98□□□□□ -0.17
CDCA3-208ENST00000540683 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
CDCA3-208ENST00000540683 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms