RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
PAAF1-209ENST00000540659 ZC3H6P61129 1189 aaKnown RBP12.35□□□□□ -0.43
PAAF1-209ENST00000540659 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
PAAF1-209ENST00000540659 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
PAAF1-209ENST00000540659 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
PAAF1-209ENST00000540659 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
PAAF1-209ENST00000540659 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
PAAF1-209ENST00000540659 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
PAAF1-209ENST00000540659 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
PAAF1-209ENST00000540659 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
PAAF1-209ENST00000540659 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
PAAF1-209ENST00000540659 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
PAAF1-209ENST00000540659 KDRP35968 1356 aa12.33□□□□□ -0.44
PAAF1-209ENST00000540659 SLIT2O94813 1529 aa12.33□□□□□ -0.44
PAAF1-209ENST00000540659 GNAI1P63096 354 aa12.33□□□□□ -0.44
PAAF1-209ENST00000540659 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.44
PAAF1-209ENST00000540659 MCM10Q7L590 875 aa12.33□□□□□ -0.44
PAAF1-209ENST00000540659 NGLY1Q96IV0 654 aa12.33□□□□□ -0.44
PAAF1-209ENST00000540659 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
PAAF1-209ENST00000540659 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
PAAF1-209ENST00000540659 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
PAAF1-209ENST00000540659 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
PAAF1-209ENST00000540659 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
PAAF1-209ENST00000540659 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
PAAF1-209ENST00000540659 COL18A1P39060 1754 aa12.31□□□□□ -0.44
PAAF1-209ENST00000540659 ATRNO75882 1429 aa12.31□□□□□ -0.44
PAAF1-209ENST00000540659 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
PAAF1-209ENST00000540659 RTF1Q92541 710 aaKnown RBP12.31□□□□□ -0.44
PAAF1-209ENST00000540659 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
PAAF1-209ENST00000540659 BCL9LQ86UU0 1499 aa12.31□□□□□ -0.44
PAAF1-209ENST00000540659 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
PAAF1-209ENST00000540659 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
PAAF1-209ENST00000540659 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
PAAF1-209ENST00000540659 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
PAAF1-209ENST00000540659 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
PAAF1-209ENST00000540659 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
PAAF1-209ENST00000540659 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
PAAF1-209ENST00000540659 USP21Q9UK80 565 aa12.29□□□□□ -0.44
PAAF1-209ENST00000540659 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
PAAF1-209ENST00000540659 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
PAAF1-209ENST00000540659 GLI3P10071 1580 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
PAAF1-209ENST00000540659 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 RGS12O14924 1447 aa12.28□□□□□ -0.44
PAAF1-209ENST00000540659 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
PAAF1-209ENST00000540659 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
PAAF1-209ENST00000540659 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
PAAF1-209ENST00000540659 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
PAAF1-209ENST00000540659 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
PAAF1-209ENST00000540659 CRB1P82279 1406 aa12.27□□□□□ -0.45
PAAF1-209ENST00000540659 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
PAAF1-209ENST00000540659 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
PAAF1-209ENST00000540659 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 CPDO75976 1380 aa12.26□□□□□ -0.45
PAAF1-209ENST00000540659 RXRBP28702 533 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
PAAF1-209ENST00000540659 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 C8orf58Q8NAV2 365 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 NOB1Q9ULX3 412 aaKnown RBP12.25□□□□□ -0.45
PAAF1-209ENST00000540659 ERBB3P21860 1342 aa12.25□□□□□ -0.45
PAAF1-209ENST00000540659 VAMP4O75379 141 aa12.24□□□□□ -0.45
PAAF1-209ENST00000540659 ABCC6O95255 1503 aa12.24□□□□□ -0.45
PAAF1-209ENST00000540659 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
PAAF1-209ENST00000540659 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
PAAF1-209ENST00000540659 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
PAAF1-209ENST00000540659 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
PAAF1-209ENST00000540659 NCAPD2Q15021 1401 aa12.23□□□□□ -0.45
PAAF1-209ENST00000540659 CHL1O00533 1208 aa12.23□□□□□ -0.45
PAAF1-209ENST00000540659 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
PAAF1-209ENST00000540659 RLBP1P12271 317 aa12.23□□□□□ -0.45
PAAF1-209ENST00000540659 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
PAAF1-209ENST00000540659 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
PAAF1-209ENST00000540659 ZNF530Q6P9A1 599 aaPredicted RBP12.23□□□□□ -0.45
PAAF1-209ENST00000540659 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
PAAF1-209ENST00000540659 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
PAAF1-209ENST00000540659 SOCS7O14512 581 aa12.22□□□□□ -0.45
PAAF1-209ENST00000540659 DZIP1LQ8IYY4 767 aaKnown RBP12.22□□□□□ -0.45
PAAF1-209ENST00000540659 MRPL50Q8N5N7 158 aaKnown RBP12.22□□□□□ -0.45
PAAF1-209ENST00000540659 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
PAAF1-209ENST00000540659 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 VPS72Q15906 364 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
PAAF1-209ENST00000540659 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.46
PAAF1-209ENST00000540659 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
PAAF1-209ENST00000540659 MS4A1P11836 297 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 TRIM27P14373 513 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms