RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TNRQ92752 1358 aa12.07□□□□□ -0.48
PHC1-208ENST00000540574 GNAI3P08754 354 aa12.07□□□□□ -0.48
PHC1-208ENST00000540574 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
PHC1-208ENST00000540574 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
PHC1-208ENST00000540574 KCNA6P17658 529 aa12.07□□□□□ -0.48
PHC1-208ENST00000540574 FOSBP53539 338 aa12.07□□□□□ -0.48
PHC1-208ENST00000540574 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 ERC2O15083 957 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
PHC1-208ENST00000540574 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
PHC1-208ENST00000540574 ABCC3O15438 1527 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
PHC1-208ENST00000540574 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
PHC1-208ENST00000540574 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
PHC1-208ENST00000540574 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
PHC1-208ENST00000540574 MLH3Q9UHC1 1453 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
PHC1-208ENST00000540574 RABEP1Q15276 862 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
PHC1-208ENST00000540574 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
PHC1-208ENST00000540574 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 VPS37CA5D8V6 355 aaPredicted RBP12.04□□□□□ -0.48
PHC1-208ENST00000540574 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
PHC1-208ENST00000540574 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 MSH6P52701 1360 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 GOLGA6L4A6NEF3 574 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 PROSER2Q86WR7 435 aaPredicted RBP12.04□□□□□ -0.48
PHC1-208ENST00000540574 ANKRD44Q8N8A2 993 aa12.04□□□□□ -0.48
PHC1-208ENST00000540574 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
PHC1-208ENST00000540574 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
PHC1-208ENST00000540574 MX1P20591 662 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 MRE11P49959 708 aa12.03□□□□□ -0.48
PHC1-208ENST00000540574 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.48
PHC1-208ENST00000540574 NASPP49321 788 aaPredicted RBP12.02□□□□□ -0.48
PHC1-208ENST00000540574 NUCB2P80303 420 aa12.02□□□□□ -0.48
PHC1-208ENST00000540574 DCTPP1Q9H773 170 aa12.02□□□□□ -0.48
PHC1-208ENST00000540574 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.49
PHC1-208ENST00000540574 GLI2P10070 1586 aa12.02□□□□□ -0.49
PHC1-208ENST00000540574 HSP90B1P14625 803 aaKnown RBP12.02□□□□□ -0.49
PHC1-208ENST00000540574 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.49
PHC1-208ENST00000540574 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
PHC1-208ENST00000540574 CLASRPQ8N2M8 674 aaKnown RBP12.02□□□□□ -0.49
PHC1-208ENST00000540574 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
PHC1-208ENST00000540574 TULP4Q9NRJ4 1543 aa12.02□□□□□ -0.49
PHC1-208ENST00000540574 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.49
PHC1-208ENST00000540574 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 QRICH2Q9H0J4 1663 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 PNMA6EA0A0J9YXQ4 647 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
PHC1-208ENST00000540574 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 CCDC85AQ96PX6 553 aaPredicted RBP12.01□□□□□ -0.49
PHC1-208ENST00000540574 PDE1AP54750 535 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
PHC1-208ENST00000540574 CHL1O00533 1208 aa12□□□□□ -0.49
PHC1-208ENST00000540574 GPATCH3Q96I76 525 aa12□□□□□ -0.49
PHC1-208ENST00000540574 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
PHC1-208ENST00000540574 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
PHC1-208ENST00000540574 FIBPO43427 364 aa12□□□□□ -0.49
PHC1-208ENST00000540574 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
PHC1-208ENST00000540574 PPFIA3O75145 1194 aa12□□□□□ -0.49
PHC1-208ENST00000540574 STK3Q13188 491 aa12□□□□□ -0.49
PHC1-208ENST00000540574 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
PHC1-208ENST00000540574 ANKLE2Q86XL3 938 aa12□□□□□ -0.49
PHC1-208ENST00000540574 PA2G4Q9UQ80 394 aaKnown RBP12□□□□□ -0.49
PHC1-208ENST00000540574 EDC4Q6P2E9 1401 aaKnown RBP11.99□□□□□ -0.49
PHC1-208ENST00000540574 ROBO2Q9HCK4 1378 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 CHRNA2Q15822 529 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 PKP1Q13835 747 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
PHC1-208ENST00000540574 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 ADGRB3O60242 1522 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 ZFYVE9O95405 1425 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 KCNQ3O43525 872 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 TCEANC2Q96MN5 208 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 DNAJC2Q99543 621 aaKnown RBP11.99□□□□□ -0.49
PHC1-208ENST00000540574 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
PHC1-208ENST00000540574 NEO1Q92859 1461 aa11.99□□□□□ -0.49
PHC1-208ENST00000540574 MROH2AA6NES4 1674 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 KDM4AO75164 1064 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 AACSQ86V21 672 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 BAG4O95429 457 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms