RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 HSPA1LP34931 641 aa10.65□□□□□ -0.7
C2CD3-215ENST00000540452 PIP4K2BP78356 416 aa10.65□□□□□ -0.7
C2CD3-215ENST00000540452 EXOSC9Q06265 439 aaKnown RBP10.65□□□□□ -0.7
C2CD3-215ENST00000540452 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.7
C2CD3-215ENST00000540452 ADAMTS7Q9UKP4 1686 aa10.65□□□□□ -0.7
C2CD3-215ENST00000540452 CRB1P82279 1406 aa10.65□□□□□ -0.7
C2CD3-215ENST00000540452 MAP3K5Q99683 1374 aa10.65□□□□□ -0.71
C2CD3-215ENST00000540452 TCERG1O14776 1098 aaKnown RBP10.64□□□□□ -0.71
C2CD3-215ENST00000540452 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
C2CD3-215ENST00000540452 CLUAP1Q96AJ1 413 aa10.64□□□□□ -0.71
C2CD3-215ENST00000540452 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
C2CD3-215ENST00000540452 SPATA31A3Q5VYP0 1347 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
C2CD3-215ENST00000540452 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
C2CD3-215ENST00000540452 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 SMC4Q9NTJ3 1288 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 DDX19BQ9UMR2 479 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 CEMIPQ8WUJ3 1361 aa10.63□□□□□ -0.71
C2CD3-215ENST00000540452 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
C2CD3-215ENST00000540452 VAMP4O75379 141 aa10.62□□□□□ -0.71
C2CD3-215ENST00000540452 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
C2CD3-215ENST00000540452 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
C2CD3-215ENST00000540452 SSH1Q8WYL5 1049 aa10.62□□□□□ -0.71
C2CD3-215ENST00000540452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.71
C2CD3-215ENST00000540452 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
C2CD3-215ENST00000540452 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 VIRMAQ69YN4 1812 aaKnown RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 HOXB7P09629 217 aa10.61□□□□□ -0.71
C2CD3-215ENST00000540452 MTHFSDQ2M296 383 aaKnown RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 FTSJ3Q8IY81 847 aaKnown RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 N4BP2Q86UW6 1770 aaPredicted RBP10.61□□□□□ -0.71
C2CD3-215ENST00000540452 ERBB3P21860 1342 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 RGPD2P0DJD1 1756 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 RGPD5Q99666 1765 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
C2CD3-215ENST00000540452 PKD1L3Q7Z443 1732 aa10.6□□□□□ -0.71
C2CD3-215ENST00000540452 PTPRCP08575 1304 aa10.59□□□□□ -0.71
C2CD3-215ENST00000540452 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
C2CD3-215ENST00000540452 TRIM27P14373 513 aa10.59□□□□□ -0.71
C2CD3-215ENST00000540452 PLEKHO1Q53GL0 409 aaPredicted RBP10.59□□□□□ -0.71
C2CD3-215ENST00000540452 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
C2CD3-215ENST00000540452 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
C2CD3-215ENST00000540452 API5Q9BZZ5 524 aaKnown RBP10.59□□□□□ -0.71
C2CD3-215ENST00000540452 SLAIN2Q9P270 581 aa10.59□□□□□ -0.71
C2CD3-215ENST00000540452 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
C2CD3-215ENST00000540452 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
C2CD3-215ENST00000540452 SOX12O15370 315 aa10.58□□□□□ -0.72
C2CD3-215ENST00000540452 NUTM2GQ5VZR2 741 aa10.58□□□□□ -0.72
C2CD3-215ENST00000540452 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
C2CD3-215ENST00000540452 ANKRD24Q8TF21 1146 aa10.58□□□□□ -0.72
C2CD3-215ENST00000540452 ABCC4O15439 1325 aa10.58□□□□□ -0.72
C2CD3-215ENST00000540452 ZNF335Q9H4Z2 1342 aaPredicted RBP10.58□□□□□ -0.72
C2CD3-215ENST00000540452 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
C2CD3-215ENST00000540452 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
C2CD3-215ENST00000540452 COL22A1Q8NFW1 1626 aaPredicted RBP10.57□□□□□ -0.72
C2CD3-215ENST00000540452 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
C2CD3-215ENST00000540452 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
C2CD3-215ENST00000540452 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 PANK1Q8TE04 598 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
C2CD3-215ENST00000540452 RWDD1Q9H446 243 aaPredicted RBP10.56□□□□□ -0.72
C2CD3-215ENST00000540452 NOB1Q9ULX3 412 aaKnown RBP10.56□□□□□ -0.72
C2CD3-215ENST00000540452 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
C2CD3-215ENST00000540452 MRC1P22897 1456 aa10.55□□□□□ -0.72
C2CD3-215ENST00000540452 RLBP1P12271 317 aa10.55□□□□□ -0.72
C2CD3-215ENST00000540452 MCM10Q7L590 875 aa10.55□□□□□ -0.72
C2CD3-215ENST00000540452 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
C2CD3-215ENST00000540452 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
C2CD3-215ENST00000540452 C8orf58Q8NAV2 365 aa10.54□□□□□ -0.72
C2CD3-215ENST00000540452 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
C2CD3-215ENST00000540452 BCL2L13Q9BXK5 485 aa10.54□□□□□ -0.72
C2CD3-215ENST00000540452 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
C2CD3-215ENST00000540452 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
C2CD3-215ENST00000540452 IBTKQ9P2D0 1353 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-215ENST00000540452 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
C2CD3-215ENST00000540452 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
C2CD3-215ENST00000540452 INTS3Q68E01 1043 aaKnown RBP10.53□□□□□ -0.72
C2CD3-215ENST00000540452 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
C2CD3-215ENST00000540452 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
C2CD3-215ENST00000540452 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
C2CD3-215ENST00000540452 HSP90AB1P08238 724 aaKnown RBP10.52□□□□□ -0.73
C2CD3-215ENST00000540452 XPCQ01831 940 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-215ENST00000540452 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
C2CD3-215ENST00000540452 RAPGEF4Q8WZA2 1011 aa10.52□□□□□ -0.73
C2CD3-215ENST00000540452 STK31Q9BXU1 1019 aa10.52□□□□□ -0.73
C2CD3-215ENST00000540452 SPG7Q9UQ90 795 aa10.52□□□□□ -0.73
C2CD3-215ENST00000540452 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.73
C2CD3-215ENST00000540452 RGS12O14924 1447 aa10.51□□□□□ -0.73
C2CD3-215ENST00000540452 COL5A2P05997 1499 aaPredicted RBP10.51□□□□□ -0.73
C2CD3-215ENST00000540452 TATP17735 454 aaPredicted RBP10.51□□□□□ -0.73
C2CD3-215ENST00000540452 TEFQ10587 303 aa10.51□□□□□ -0.73
C2CD3-215ENST00000540452 ZNF530Q6P9A1 599 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms