RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 ERC1Q8IUD2 1116 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 ZNF396Q96N95 335 aaPredicted RBP7.78□□□□□ -1.16
RTL9-203ENST00000540313 KRT28Q7Z3Y7 464 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 TNMDQ9H2S6 317 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
RTL9-203ENST00000540313 RAPGEF6Q8TEU7 1601 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 C16orf71Q8IYS4 520 aaPredicted RBP7.78□□□□□ -1.16
RTL9-203ENST00000540313 LRRCC1Q9C099 1032 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 CYP46A1Q9Y6A2 500 aa7.78□□□□□ -1.16
RTL9-203ENST00000540313 NCOA1Q15788 1441 aa7.77□□□□□ -1.16
RTL9-203ENST00000540313 CDR1P51861 262 aa7.77□□□□□ -1.16
RTL9-203ENST00000540313 LRRC59Q96AG4 307 aaKnown RBP7.77□□□□□ -1.16
RTL9-203ENST00000540313 CCT4P50991 539 aaKnown RBP7.77□□□□□ -1.17
RTL9-203ENST00000540313 NCBP3Q53F19 620 aaKnown RBP7.77□□□□□ -1.17
RTL9-203ENST00000540313 CABP1Q9NZU7 370 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 CFAP74Q9C0B2 1584 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 ABCC2Q92887 1545 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 NKTRP30414 1462 aaKnown RBP7.77□□□□□ -1.17
RTL9-203ENST00000540313 KRT85P78386 507 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
RTL9-203ENST00000540313 NEUROD6Q96NK8 337 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 SLC12A5Q9H2X9 1139 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 SYCE3A1L190 88 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 LEKR1Q6ZMV7 388 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 CAGE1Q8TC20 777 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 CNKSR2Q8WXI2 1034 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 TBC1D2Q9BYX2 928 aa7.77□□□□□ -1.17
RTL9-203ENST00000540313 ANKRD1Q15327 319 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 WASHC4Q2M389 1173 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 CDCA7Q9BWT1 371 aaPredicted RBP7.76□□□□□ -1.17
RTL9-203ENST00000540313 A2MP01023 1474 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 SLC4A2P04920 1241 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 NAP1L1P55209 391 aaKnown RBP7.76□□□□□ -1.17
RTL9-203ENST00000540313 CNNM1Q9NRU3 951 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 CEBPZQ03701 1054 aaKnown RBP7.76□□□□□ -1.17
RTL9-203ENST00000540313 AIMP1Q12904 312 aaKnown RBP7.76□□□□□ -1.17
RTL9-203ENST00000540313 PDCL2Q8N4E4 241 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 TMEM57Q8N5G2 664 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 MAP3K1Q13233 1512 aa7.76□□□□□ -1.17
RTL9-203ENST00000540313 CEBPAP49715 358 aaPredicted RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 STK38Q15208 465 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 ZSCAN25Q6NSZ9 544 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 SRCIN1Q9C0H9 1055 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.75□□□□□ -1.17
RTL9-203ENST00000540313 ITSN2Q9NZM3 1697 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 DUOX2Q9NRD8 1548 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 SMARCE1Q969G3 411 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 CEP170Q5SW79 1584 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 CHD1O14646 1710 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 IGHMBP2P38935 993 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 CCDC158Q5M9N0 1113 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 NUP62CLQ9H1M0 184 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 RARSP54136 660 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 SART3Q15020 963 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 LARP1BQ659C4 914 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 TNPO1Q92973 898 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 BRMS1Q9HCU9 246 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 KDM5BQ9UGL1 1544 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 H0YHG0 523 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 ZSCAN31Q96LW9 406 aaPredicted RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 DNAJC2Q99543 621 aaKnown RBP7.75□□□□□ -1.17
RTL9-203ENST00000540313 MPHOSPH8Q99549 860 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 PDCL3Q9H2J4 239 aa7.75□□□□□ -1.17
RTL9-203ENST00000540313 PCF11O94913 1555 aaKnown RBP7.74□□□□□ -1.17
RTL9-203ENST00000540313 XBP1P17861 261 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 FILIP1LQ4L180 1135 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 SLF2Q8IX21 1173 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 RPAP2Q8IXW5 612 aaPredicted RBP7.74□□□□□ -1.17
RTL9-203ENST00000540313 SERPINC1P01008 464 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 SPATA32Q96LK8 384 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 ATP10AO60312 1499 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 ZC3H6P61129 1189 aaKnown RBP7.74□□□□□ -1.17
RTL9-203ENST00000540313 C19orf44Q9H6X5 657 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 PDRG1Q9NUG6 133 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 STK3Q13188 491 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 TAF3Q5VWG9 929 aa7.74□□□□□ -1.17
RTL9-203ENST00000540313 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
RTL9-203ENST00000540313 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
RTL9-203ENST00000540313 SSFA2P28290 1259 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 ST5P78524 1137 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 IKQ13123 557 aaPredicted RBP7.73□□□□□ -1.17
RTL9-203ENST00000540313 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
RTL9-203ENST00000540313 TTC21AQ8NDW8 1320 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 ME1P48163 572 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 RBM5P52756 815 aaKnown RBP eCLIP7.73□□□□□ -1.17
RTL9-203ENST00000540313 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
RTL9-203ENST00000540313 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 NSD3Q9BZ95 1437 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 BTBD11A6QL63 1104 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 CBFA2T2O43439 604 aa7.73□□□□□ -1.17
RTL9-203ENST00000540313 PTPN23Q9H3S7 1636 aa7.72□□□□□ -1.17
RTL9-203ENST00000540313 PDIA4P13667 645 aaKnown RBP7.72□□□□□ -1.17
RTL9-203ENST00000540313 RDXP35241 583 aaKnown RBP7.72□□□□□ -1.17
RTL9-203ENST00000540313 TMPOP42166 694 aaKnown RBP7.72□□□□□ -1.17
RTL9-203ENST00000540313 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
RTL9-203ENST00000540313 TTC39AQ5SRH9 613 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms