RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
GPD2-213ENST00000540309 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
GPD2-213ENST00000540309 TAF3Q5VWG9 929 aa12.59□□□□□ -0.39
GPD2-213ENST00000540309 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
GPD2-213ENST00000540309 TMEM87AQ8NBN3 555 aa12.59□□□□□ -0.39
GPD2-213ENST00000540309 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
GPD2-213ENST00000540309 SYCE3A1L190 88 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 ERC2O15083 957 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
GPD2-213ENST00000540309 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
GPD2-213ENST00000540309 NPATQ14207 1427 aa12.57□□□□□ -0.4
GPD2-213ENST00000540309 FYB1O15117 783 aa12.57□□□□□ -0.4
GPD2-213ENST00000540309 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
GPD2-213ENST00000540309 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
GPD2-213ENST00000540309 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 SYCP1Q15431 976 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
GPD2-213ENST00000540309 TUBGCP6Q96RT7 1819 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
GPD2-213ENST00000540309 PTMAP06454 111 aaKnown RBP12.56□□□□□ -0.4
GPD2-213ENST00000540309 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
GPD2-213ENST00000540309 SDSP20132 328 aa12.55□□□□□ -0.4
GPD2-213ENST00000540309 MCCP23508 829 aa12.55□□□□□ -0.4
GPD2-213ENST00000540309 PKP1Q13835 747 aa12.55□□□□□ -0.4
GPD2-213ENST00000540309 FEZ1Q99689 392 aa12.55□□□□□ -0.4
GPD2-213ENST00000540309 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
GPD2-213ENST00000540309 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
GPD2-213ENST00000540309 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
GPD2-213ENST00000540309 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
GPD2-213ENST00000540309 USP25Q9UHP3 1055 aa12.54□□□□□ -0.4
GPD2-213ENST00000540309 PTPRCP08575 1304 aa12.54□□□□□ -0.4
GPD2-213ENST00000540309 WDR33Q9C0J8 1336 aaKnown RBP12.54□□□□□ -0.4
GPD2-213ENST00000540309 ATP7BP35670 1465 aa12.53□□□□□ -0.4
GPD2-213ENST00000540309 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
GPD2-213ENST00000540309 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
GPD2-213ENST00000540309 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
GPD2-213ENST00000540309 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
GPD2-213ENST00000540309 HMMRO75330 724 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 PLEKHG5O94827 1062 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 CCDC183Q5T5S1 534 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 KIAA0232Q92628 1395 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 PTPRMP28827 1452 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 MLH3Q9UHC1 1453 aa12.52□□□□□ -0.4
GPD2-213ENST00000540309 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
GPD2-213ENST00000540309 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.41
GPD2-213ENST00000540309 RGS12O14924 1447 aa12.52□□□□□ -0.41
GPD2-213ENST00000540309 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.41
GPD2-213ENST00000540309 CTIFO43310 598 aaKnown RBP12.51□□□□□ -0.41
GPD2-213ENST00000540309 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
GPD2-213ENST00000540309 CHAF1AQ13111 956 aaPredicted RBP12.51□□□□□ -0.41
GPD2-213ENST00000540309 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
GPD2-213ENST00000540309 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
GPD2-213ENST00000540309 MX1P20591 662 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 FAM193AP78312 1265 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 ANKRD7Q92527 254 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 GGNBP2Q9H3C7 697 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 TMEM132EQ6IEE7 984 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
GPD2-213ENST00000540309 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 NSFL1CQ9UNZ2 370 aaKnown RBP12.49□□□□□ -0.41
GPD2-213ENST00000540309 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 AOX1Q06278 1338 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 KDM4AO75164 1064 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 NEK4P51957 841 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
GPD2-213ENST00000540309 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
GPD2-213ENST00000540309 UBE2HP62256 183 aa12.48□□□□□ -0.41
GPD2-213ENST00000540309 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
GPD2-213ENST00000540309 KIAA1524Q8TCG1 905 aa12.48□□□□□ -0.41
GPD2-213ENST00000540309 DLC1Q96QB1 1528 aa12.48□□□□□ -0.41
GPD2-213ENST00000540309 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
GPD2-213ENST00000540309 YTHDC2Q9H6S0 1430 aaKnown RBP12.47□□□□□ -0.41
GPD2-213ENST00000540309 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 RPAP1Q9BWH6 1393 aaPredicted RBP12.47□□□□□ -0.41
GPD2-213ENST00000540309 ADCY5O95622 1261 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 PDE1AP54750 535 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
GPD2-213ENST00000540309 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
GPD2-213ENST00000540309 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
GPD2-213ENST00000540309 TCHHQ07283 1943 aa12.46□□□□□ -0.41
GPD2-213ENST00000540309 GABPB1Q06547 395 aaPredicted RBP12.46□□□□□ -0.41
GPD2-213ENST00000540309 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.41
GPD2-213ENST00000540309 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
GPD2-213ENST00000540309 SIGLEC1Q9BZZ2 1709 aa12.45□□□□□ -0.42
GPD2-213ENST00000540309 IL13P35225 146 aa12.45□□□□□ -0.42
GPD2-213ENST00000540309 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
GPD2-213ENST00000540309 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms