RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.73■■■□□ 2.35
TRIM65-202ENST00000540128 KDRP35968 1356 aa29.72■■■□□ 2.35
TRIM65-202ENST00000540128 RGPD1P0DJD0 1748 aa29.71■■■□□ 2.35
TRIM65-202ENST00000540128 SULT6B1Q6IMI4 303 aa29.69■■■□□ 2.34
TRIM65-202ENST00000540128 AEBP1Q8IUX7 1158 aa29.69■■■□□ 2.34
TRIM65-202ENST00000540128 DDX54Q8TDD1 881 aaKnown RBP29.69■■■□□ 2.34
TRIM65-202ENST00000540128 EP400Q96L91 3159 aa29.68■■■□□ 2.34
TRIM65-202ENST00000540128 TRIM37O94972 964 aa29.67■■■□□ 2.34
TRIM65-202ENST00000540128 PRKRIP1Q9H875 184 aaPredicted RBP29.67■■■□□ 2.34
TRIM65-202ENST00000540128 SPG7Q9UQ90 795 aa29.66■■■□□ 2.34
TRIM65-202ENST00000540128 PCDH11XQ9BZA7 1347 aa29.65■■■□□ 2.34
TRIM65-202ENST00000540128 PCDH11YQ9BZA8 1340 aa29.65■■■□□ 2.34
TRIM65-202ENST00000540128 CYP27B1O15528 508 aa29.64■■■□□ 2.34
TRIM65-202ENST00000540128 SF3B2Q13435 895 aaKnown RBP29.64■■■□□ 2.34
TRIM65-202ENST00000540128 NUDCQ9Y266 331 aa29.64■■■□□ 2.34
TRIM65-202ENST00000540128 MYBBP1AQ9BQG0 1328 aaKnown RBP29.64■■■□□ 2.34
TRIM65-202ENST00000540128 SHANK3Q9BYB0 1731 aa29.63■■■□□ 2.33
TRIM65-202ENST00000540128 BCL11BQ9C0K0 894 aaPredicted RBP29.63■■■□□ 2.33
TRIM65-202ENST00000540128 PKD1L3Q7Z443 1732 aa29.62■■■□□ 2.33
TRIM65-202ENST00000540128 AMOTQ4VCS5 1084 aa29.62■■■□□ 2.33
TRIM65-202ENST00000540128 PLEKHO1Q53GL0 409 aaPredicted RBP29.62■■■□□ 2.33
TRIM65-202ENST00000540128 NKX1-1Q15270 411 aaPredicted RBP29.61■■■□□ 2.33
TRIM65-202ENST00000540128 U2SURPO15042 1029 aaKnown RBP29.6■■■□□ 2.33
TRIM65-202ENST00000540128 HMOX1P09601 288 aa29.6■■■□□ 2.33
TRIM65-202ENST00000540128 SBF2Q86WG5 1849 aa29.59■■■□□ 2.33
TRIM65-202ENST00000540128 PTF1AQ7RTS3 328 aa29.58■■■□□ 2.33
TRIM65-202ENST00000540128 BAG6P46379 1132 aa29.57■■■□□ 2.32
TRIM65-202ENST00000540128 DEFB132Q7Z7B7 95 aa29.57■■■□□ 2.32
TRIM65-202ENST00000540128 KCNQ2O43526 872 aa29.56■■■□□ 2.32
TRIM65-202ENST00000540128 APBA3O96018 575 aa29.56■■■□□ 2.32
TRIM65-202ENST00000540128 IFNL2Q8IZJ0 200 aa29.56■■■□□ 2.32
TRIM65-202ENST00000540128 PHKG2P15735 406 aa29.55■■■□□ 2.32
TRIM65-202ENST00000540128 TNS1Q9HBL0 1735 aaKnown RBP29.54■■■□□ 2.32
TRIM65-202ENST00000540128 ACSBG1Q96GR2 724 aa29.54■■■□□ 2.32
TRIM65-202ENST00000540128 U2AF1L5P0DN76 240 aaPredicted RBP29.53■■■□□ 2.32
TRIM65-202ENST00000540128 U2AF1Q01081 240 aaKnown RBP eCLIP29.53■■■□□ 2.32
TRIM65-202ENST00000540128 FCHSD2O94868 740 aa29.52■■■□□ 2.32
TRIM65-202ENST00000540128 CAMKK2Q96RR4 588 aa29.52■■■□□ 2.32
TRIM65-202ENST00000540128 RSPH6AQ9H0K4 717 aa29.52■■■□□ 2.32
TRIM65-202ENST00000540128 KAT6BQ8WYB5 2073 aa29.51■■■□□ 2.31
TRIM65-202ENST00000540128 PLSCR1O15162 318 aa29.51■■■□□ 2.31
TRIM65-202ENST00000540128 PRIM1P49642 420 aaKnown RBP29.51■■■□□ 2.31
TRIM65-202ENST00000540128 ZNF530Q6P9A1 599 aaPredicted RBP29.51■■■□□ 2.31
TRIM65-202ENST00000540128 EN1Q05925 392 aaPredicted RBP29.5■■■□□ 2.31
TRIM65-202ENST00000540128 NHSQ6T4R5 1651 aa29.5■■■□□ 2.31
TRIM65-202ENST00000540128 HSP90AB1P08238 724 aaKnown RBP29.49■■■□□ 2.31
TRIM65-202ENST00000540128 ANP32CO43423 234 aa29.46■■■□□ 2.31
TRIM65-202ENST00000540128 PRKAR2BP31323 418 aa29.46■■■□□ 2.31
TRIM65-202ENST00000540128 MTHFSDQ2M296 383 aaKnown RBP29.46■■■□□ 2.31
TRIM65-202ENST00000540128 DCAF5Q96JK2 942 aa29.46■■■□□ 2.31
TRIM65-202ENST00000540128 AKAP4Q5JQC9 854 aa29.45■■■□□ 2.31
TRIM65-202ENST00000540128 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
TRIM65-202ENST00000540128 EZH2Q15910 746 aaKnown RBP29.44■■■□□ 2.3
TRIM65-202ENST00000540128 PHACTR3Q96KR7 559 aa29.44■■■□□ 2.3
TRIM65-202ENST00000540128 SYTL4Q96C24 671 aaPredicted RBP29.43■■■□□ 2.3
TRIM65-202ENST00000540128 DOT1LQ8TEK3 1739 aa29.42■■■□□ 2.3
TRIM65-202ENST00000540128 ERVV-2B6SEH9 535 aa29.41■■■□□ 2.3
TRIM65-202ENST00000540128 GAS2L2Q8NHY3 880 aa29.41■■■□□ 2.3
TRIM65-202ENST00000540128 PROM2Q8N271 834 aa29.4■■■□□ 2.3
TRIM65-202ENST00000540128 PLEKHF1Q96S99 279 aa29.39■■■□□ 2.3
TRIM65-202ENST00000540128 RGPD3A6NKT7 1758 aaPredicted RBP29.39■■■□□ 2.29
TRIM65-202ENST00000540128 RGPD4Q7Z3J3 1758 aa29.39■■■□□ 2.29
TRIM65-202ENST00000540128 BTAF1O14981 1849 aa29.38■■■□□ 2.29
TRIM65-202ENST00000540128 KDM6AO15550 1401 aaPredicted RBP29.38■■■□□ 2.29
TRIM65-202ENST00000540128 TOGARAM1Q9Y4F4 1720 aa29.38■■■□□ 2.29
TRIM65-202ENST00000540128 MPRIPQ6WCQ1 1025 aa29.38■■■□□ 2.29
TRIM65-202ENST00000540128 PIGBQ92521 554 aa29.38■■■□□ 2.29
TRIM65-202ENST00000540128 PNNQ9H307 717 aaKnown RBP29.38■■■□□ 2.29
TRIM65-202ENST00000540128 TMOD3Q9NYL9 352 aa29.35■■■□□ 2.29
TRIM65-202ENST00000540128 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
TRIM65-202ENST00000540128 ITGB4P16144 1822 aa29.34■■■□□ 2.29
TRIM65-202ENST00000540128 RNMTO43148 476 aaKnown RBP29.33■■■□□ 2.29
TRIM65-202ENST00000540128 LGR6Q9HBX8 967 aa29.33■■■□□ 2.29
TRIM65-202ENST00000540128 GNAT3A8MTJ3 354 aa29.32■■■□□ 2.28
TRIM65-202ENST00000540128 CCDC184Q52MB2 194 aa29.32■■■□□ 2.28
TRIM65-202ENST00000540128 MAP3K5Q99683 1374 aa29.31■■■□□ 2.28
TRIM65-202ENST00000540128 CABP4P57796 275 aa29.31■■■□□ 2.28
TRIM65-202ENST00000540128 WDR43Q15061 677 aaKnown RBP eCLIP29.31■■■□□ 2.28
TRIM65-202ENST00000540128 SMARCC1Q92922 1105 aaPredicted RBP29.31■■■□□ 2.28
TRIM65-202ENST00000540128 ADAMTS8Q9UP79 889 aa29.31■■■□□ 2.28
TRIM65-202ENST00000540128 NEFMP07197 916 aa29.3■■■□□ 2.28
TRIM65-202ENST00000540128 RREB1Q92766 1687 aa29.3■■■□□ 2.28
TRIM65-202ENST00000540128 SLC27A3Q5K4L6 730 aa29.29■■■□□ 2.28
TRIM65-202ENST00000540128 IL17REQ8NFR9 667 aa29.29■■■□□ 2.28
TRIM65-202ENST00000540128 ADAMTS7Q9UKP4 1686 aa29.28■■■□□ 2.28
TRIM65-202ENST00000540128 NFATC2IPQ8NCF5 419 aa29.28■■■□□ 2.28
TRIM65-202ENST00000540128 SLC52A2Q9HAB3 445 aa29.28■■■□□ 2.28
TRIM65-202ENST00000540128 SCN11AQ9UI33 1791 aa29.27■■■□□ 2.28
TRIM65-202ENST00000540128 HTATSF1O43719 755 aaKnown RBP29.27■■■□□ 2.28
TRIM65-202ENST00000540128 ATG3Q9NT62 314 aa29.27■■■□□ 2.28
TRIM65-202ENST00000540128 ASAP1Q9ULH1 1129 aa29.26■■■□□ 2.27
TRIM65-202ENST00000540128 LRRC4BQ9NT99 713 aa29.25■■■□□ 2.27
TRIM65-202ENST00000540128 PALLDQ8WX93 1383 aa29.25■■■□□ 2.27
TRIM65-202ENST00000540128 MAPK8IP3Q9UPT6 1336 aa29.24■■■□□ 2.27
TRIM65-202ENST00000540128 MRC1P22897 1456 aa29.24■■■□□ 2.27
TRIM65-202ENST00000540128 NFE2L2Q16236 605 aa29.24■■■□□ 2.27
TRIM65-202ENST00000540128 PNISRQ8TF01 805 aaKnown RBP29.24■■■□□ 2.27
TRIM65-202ENST00000540128 CEMIPQ8WUJ3 1361 aa29.24■■■□□ 2.27
TRIM65-202ENST00000540128 NBPF14Q5TI25 921 aa29.23■■■□□ 2.27
TRIM65-202ENST00000540128 RUNDC1Q96C34 613 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms