RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CAMTA1Q9Y6Y1 1673 aa8.96□□□□□ -0.97
CDH19-203ENST00000540086 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
CDH19-203ENST00000540086 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
CDH19-203ENST00000540086 IFT57Q9NWB7 429 aa8.96□□□□□ -0.98
CDH19-203ENST00000540086 COL18A1P39060 1754 aa8.96□□□□□ -0.98
CDH19-203ENST00000540086 COL16A1Q07092 1604 aaPredicted RBP8.96□□□□□ -0.98
CDH19-203ENST00000540086 MAP3K5Q99683 1374 aa8.96□□□□□ -0.98
CDH19-203ENST00000540086 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 NUTM2EB1AL46 878 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 PLIN1O60240 522 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 GNAI1P63096 354 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 ZNF530Q6P9A1 599 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 TOM1L2Q6ZVM7 507 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 NUTM2AQ8IVF1 878 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 RAPGEF4Q8WZA2 1011 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 WDR17Q8IZU2 1322 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 COL5A2P05997 1499 aaPredicted RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 BCAR3O75815 825 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 ADAMTS2O95450 1211 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 EVA1CP58658 441 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
CDH19-203ENST00000540086 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 MBIPQ9NS73 344 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 ABCA3Q99758 1704 aa8.95□□□□□ -0.98
CDH19-203ENST00000540086 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CDH19-203ENST00000540086 TATP17735 454 aaPredicted RBP8.94□□□□□ -0.98
CDH19-203ENST00000540086 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
CDH19-203ENST00000540086 AMOTQ4VCS5 1084 aa8.94□□□□□ -0.98
CDH19-203ENST00000540086 LMO7Q8WWI1 1683 aa8.94□□□□□ -0.98
CDH19-203ENST00000540086 CRB1P82279 1406 aa8.94□□□□□ -0.98
CDH19-203ENST00000540086 HTATSF1O43719 755 aaKnown RBP8.93□□□□□ -0.98
CDH19-203ENST00000540086 IL17REQ8NFR9 667 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 MEGF6O75095 1541 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 RARSP54136 660 aaKnown RBP8.93□□□□□ -0.98
CDH19-203ENST00000540086 AKAP4Q5JQC9 854 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 MIS18AQ9NYP9 233 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 RGPD2P0DJD1 1756 aa8.93□□□□□ -0.98
CDH19-203ENST00000540086 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
CDH19-203ENST00000540086 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 CHL1O00533 1208 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 MPRIPQ6WCQ1 1025 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 CARD10Q9BWT7 1032 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 LGR6Q9HBX8 967 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 ELL2O00472 640 aaPredicted RBP8.92□□□□□ -0.98
CDH19-203ENST00000540086 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
CDH19-203ENST00000540086 FAM208AQ9UK61 1670 aaKnown RBP8.91□□□□□ -0.98
CDH19-203ENST00000540086 CT47B1P0C2W7 299 aaPredicted RBP8.91□□□□□ -0.98
CDH19-203ENST00000540086 KRT24Q2M2I5 525 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 C20orf194Q5TEA3 1177 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 C8orf58Q8NAV2 365 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 TSPYL4Q9UJ04 414 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 SPG7Q9UQ90 795 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 JCADQ9P266 1359 aa8.91□□□□□ -0.98
CDH19-203ENST00000540086 RNMTO43148 476 aaKnown RBP8.9□□□□□ -0.98
CDH19-203ENST00000540086 HSPA1LP34931 641 aa8.9□□□□□ -0.98
CDH19-203ENST00000540086 SSH1Q8WYL5 1049 aa8.9□□□□□ -0.98
CDH19-203ENST00000540086 SMC4Q9NTJ3 1288 aa8.9□□□□□ -0.98
CDH19-203ENST00000540086 CEMIPQ8WUJ3 1361 aa8.9□□□□□ -0.98
CDH19-203ENST00000540086 VAMP4O75379 141 aa8.9□□□□□ -0.99
CDH19-203ENST00000540086 IL2RBP14784 551 aa8.9□□□□□ -0.99
CDH19-203ENST00000540086 PHKG2P15735 406 aa8.9□□□□□ -0.99
CDH19-203ENST00000540086 TWISTNBQ3B726 338 aaPredicted RBP8.9□□□□□ -0.99
CDH19-203ENST00000540086 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.9□□□□□ -0.99
CDH19-203ENST00000540086 FRAT1Q92837 279 aaPredicted RBP8.9□□□□□ -0.99
CDH19-203ENST00000540086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.99
CDH19-203ENST00000540086 OVOS2A0A0G2JMS6 1433 aa8.9□□□□□ -0.99
CDH19-203ENST00000540086 DLG5Q8TDM6 1919 aa8.89□□□□□ -0.99
CDH19-203ENST00000540086 CYP27B1O15528 508 aa8.89□□□□□ -0.99
CDH19-203ENST00000540086 CANXP27824 592 aaKnown RBP8.89□□□□□ -0.99
CDH19-203ENST00000540086 TEFQ10587 303 aa8.89□□□□□ -0.99
CDH19-203ENST00000540086 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
CDH19-203ENST00000540086 EXOC6Q8TAG9 804 aa8.89□□□□□ -0.99
CDH19-203ENST00000540086 COL14A1Q05707 1796 aaKnown RBP8.88□□□□□ -0.99
CDH19-203ENST00000540086 TCERG1O14776 1098 aaKnown RBP8.88□□□□□ -0.99
CDH19-203ENST00000540086 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 IFNL2Q8IZJ0 200 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 ZCRB1Q8TBF4 217 aaKnown RBP8.88□□□□□ -0.99
CDH19-203ENST00000540086 CRBNQ96SW2 442 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 PLEKHG2Q9H7P9 1386 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 TNNQ9UQP3 1299 aa8.88□□□□□ -0.99
CDH19-203ENST00000540086 LRRC37A3O60309 1634 aa8.87□□□□□ -0.99
CDH19-203ENST00000540086 KDM6AO15550 1401 aaPredicted RBP8.87□□□□□ -0.99
CDH19-203ENST00000540086 DDX54Q8TDD1 881 aaKnown RBP8.87□□□□□ -0.99
CDH19-203ENST00000540086 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 BTBD11A6QL63 1104 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 KCNQ3O43525 872 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 ZNF428Q96B54 188 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
CDH19-203ENST00000540086 BABAM1Q9NWV8 329 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms