RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
USB1-203ENST00000539737 IP6K1Q92551 441 aa21.12■□□□□ 0.97
USB1-203ENST00000539737 MAP3K19Q56UN5 1328 aa21.11■□□□□ 0.97
USB1-203ENST00000539737 C1QTNF8P60827 252 aa21.1■□□□□ 0.97
USB1-203ENST00000539737 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
USB1-203ENST00000539737 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
USB1-203ENST00000539737 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
USB1-203ENST00000539737 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
USB1-203ENST00000539737 LY75O60449 1722 aa21.08■□□□□ 0.97
USB1-203ENST00000539737 HOXC9P31274 260 aa21.08■□□□□ 0.97
USB1-203ENST00000539737 COL24A1Q17RW2 1714 aa21.08■□□□□ 0.97
USB1-203ENST00000539737 RRS1Q15050 365 aaKnown RBP21.07■□□□□ 0.96
USB1-203ENST00000539737 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
USB1-203ENST00000539737 MSH5O43196 834 aa21.06■□□□□ 0.96
USB1-203ENST00000539737 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.966e-6■□□□□ 10.9
USB1-203ENST00000539737 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
USB1-203ENST00000539737 POLD1P28340 1107 aa21.05■□□□□ 0.96
USB1-203ENST00000539737 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
USB1-203ENST00000539737 AMPHP49418 695 aa21.04■□□□□ 0.96
USB1-203ENST00000539737 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
USB1-203ENST00000539737 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
USB1-203ENST00000539737 TESK2Q96S53 571 aa21.04■□□□□ 0.96
USB1-203ENST00000539737 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
USB1-203ENST00000539737 NBPF6Q5VWK0 638 aa21.03■□□□□ 0.96
USB1-203ENST00000539737 ZCRB1Q8TBF4 217 aaKnown RBP21.03■□□□□ 0.96
USB1-203ENST00000539737 NBPF4Q96M43 638 aa21.03■□□□□ 0.96
USB1-203ENST00000539737 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
USB1-203ENST00000539737 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
USB1-203ENST00000539737 COG3Q96JB2 828 aa21.02■□□□□ 0.96
USB1-203ENST00000539737 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
USB1-203ENST00000539737 CCER1Q8TC90 406 aaPredicted RBP21.01■□□□□ 0.95
USB1-203ENST00000539737 CEP350Q5VT06 3117 aa21.01■□□□□ 0.95
USB1-203ENST00000539737 AMIGO3Q86WK7 504 aa21■□□□□ 0.95
USB1-203ENST00000539737 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
USB1-203ENST00000539737 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
USB1-203ENST00000539737 C5P01031 1676 aa20.97■□□□□ 0.95
USB1-203ENST00000539737 TOGARAM1Q9Y4F4 1720 aa20.97■□□□□ 0.95
USB1-203ENST00000539737 HSP90AB2PQ58FF8 381 aa20.96■□□□□ 0.95
USB1-203ENST00000539737 USP47Q96K76 1375 aa20.96■□□□□ 0.95
USB1-203ENST00000539737 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
USB1-203ENST00000539737 FYB1O15117 783 aa20.94■□□□□ 0.94
USB1-203ENST00000539737 TAF1LQ8IZX4 1826 aa20.93■□□□□ 0.94
USB1-203ENST00000539737 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
USB1-203ENST00000539737 ZNF526Q8TF50 670 aaPredicted RBP20.92■□□□□ 0.94
USB1-203ENST00000539737 PALLDQ8WX93 1383 aa20.91■□□□□ 0.94
USB1-203ENST00000539737 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
USB1-203ENST00000539737 RTL1A6NKG5 1358 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 CYP27B1O15528 508 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 PHF14O94880 888 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 RAPGEF4Q8WZA2 1011 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 PUS7Q96PZ0 661 aaKnown RBP20.9■□□□□ 0.94
USB1-203ENST00000539737 ITGB4P16144 1822 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 KIF20BQ96Q89 1820 aa20.9■□□□□ 0.94
USB1-203ENST00000539737 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
USB1-203ENST00000539737 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
USB1-203ENST00000539737 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
USB1-203ENST00000539737 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
USB1-203ENST00000539737 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 SLC24A1O60721 1099 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 CARD14Q9BXL6 1004 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 INSRP06213 1382 aa20.84■□□□□ 0.93
USB1-203ENST00000539737 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
USB1-203ENST00000539737 GRIN3BO60391 1043 aa20.83■□□□□ 0.93
USB1-203ENST00000539737 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
USB1-203ENST00000539737 PIGBQ92521 554 aa20.83■□□□□ 0.93
USB1-203ENST00000539737 PKD1L3Q7Z443 1732 aa20.82■□□□□ 0.92
USB1-203ENST00000539737 AK7Q96M32 723 aa20.82■□□□□ 0.92
USB1-203ENST00000539737 FLT4P35916 1363 aa20.82■□□□□ 0.92
USB1-203ENST00000539737 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
USB1-203ENST00000539737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
USB1-203ENST00000539737 MAP2P11137 1827 aaKnown RBP20.81■□□□□ 0.92
USB1-203ENST00000539737 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
USB1-203ENST00000539737 CGNL1Q0VF96 1302 aa20.79■□□□□ 0.92
USB1-203ENST00000539737 TMF1P82094 1093 aa20.79■□□□□ 0.92
USB1-203ENST00000539737 ITPK1Q13572 414 aa20.79■□□□□ 0.92
USB1-203ENST00000539737 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
USB1-203ENST00000539737 ADCY9O60503 1353 aa20.79■□□□□ 0.92
USB1-203ENST00000539737 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
USB1-203ENST00000539737 GPBP1L1Q9HC44 474 aaPredicted RBP20.77■□□□□ 0.92
USB1-203ENST00000539737 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
USB1-203ENST00000539737 GNPATO15228 680 aa20.74■□□□□ 0.91
USB1-203ENST00000539737 SIK1P57059 783 aa20.74■□□□□ 0.91
USB1-203ENST00000539737 EYA1Q99502 592 aa20.74■□□□□ 0.91
USB1-203ENST00000539737 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
USB1-203ENST00000539737 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
USB1-203ENST00000539737 ANKRD26Q9UPS8 1709 aa20.73■□□□□ 0.91
USB1-203ENST00000539737 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
USB1-203ENST00000539737 NCAPD2Q15021 1401 aa20.72■□□□□ 0.91
USB1-203ENST00000539737 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
USB1-203ENST00000539737 SMARCC1Q92922 1105 aaPredicted RBP20.72■□□□□ 0.91
USB1-203ENST00000539737 KIAA1551Q9HCM1 1747 aa20.72■□□□□ 0.91
USB1-203ENST00000539737 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
USB1-203ENST00000539737 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
USB1-203ENST00000539737 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
USB1-203ENST00000539737 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
USB1-203ENST00000539737 ATG3Q9NT62 314 aa20.7■□□□□ 0.9
USB1-203ENST00000539737 TMOD3Q9NYL9 352 aa20.7■□□□□ 0.9
USB1-203ENST00000539737 MMP10P09238 476 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms