RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 AMOTQ4VCS5 1084 aa21.11■□□□□ 0.97
TRAF3-204ENST00000539721 MEGF6O75095 1541 aa21.11■□□□□ 0.97
TRAF3-204ENST00000539721 LRP6O75581 1613 aa21.1■□□□□ 0.97
TRAF3-204ENST00000539721 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
TRAF3-204ENST00000539721 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
TRAF3-204ENST00000539721 RTF1Q92541 710 aaKnown RBP21.09■□□□□ 0.97
TRAF3-204ENST00000539721 IL16Q14005 1332 aa21.09■□□□□ 0.97
TRAF3-204ENST00000539721 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
TRAF3-204ENST00000539721 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
TRAF3-204ENST00000539721 SLIT2O94813 1529 aa21.09■□□□□ 0.97
TRAF3-204ENST00000539721 DCTN1Q14203 1278 aa21.08■□□□□ 0.97
TRAF3-204ENST00000539721 TRMT2AQ8IZ69 625 aaKnown RBP21.08■□□□□ 0.97
TRAF3-204ENST00000539721 THUMPD2Q9BTF0 503 aaKnown RBP21.08■□□□□ 0.97
TRAF3-204ENST00000539721 PKD1L3Q7Z443 1732 aa21.08■□□□□ 0.96
TRAF3-204ENST00000539721 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.96
TRAF3-204ENST00000539721 ZNF530Q6P9A1 599 aaPredicted RBP21.08■□□□□ 0.96
TRAF3-204ENST00000539721 HTATSF1O43719 755 aaKnown RBP21.07■□□□□ 0.96
TRAF3-204ENST00000539721 C8orf37Q96NL8 207 aa21.07■□□□□ 0.96
TRAF3-204ENST00000539721 MYH16Q9H6N6 1097 aa21.07■□□□□ 0.96
TRAF3-204ENST00000539721 MCM10Q7L590 875 aa21.06■□□□□ 0.96
TRAF3-204ENST00000539721 NGLY1Q96IV0 654 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 OVOS2A0A0G2JMS6 1433 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 VIRMAQ69YN4 1812 aaKnown RBP21.05■□□□□ 0.96
TRAF3-204ENST00000539721 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 C1orf141Q5JVX7 400 aa21.05■□□□□ 0.96
TRAF3-204ENST00000539721 WNK3Q9BYP7 1800 aa21.04■□□□□ 0.96
TRAF3-204ENST00000539721 IL2RBP14784 551 aa21.04■□□□□ 0.96
TRAF3-204ENST00000539721 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
TRAF3-204ENST00000539721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
TRAF3-204ENST00000539721 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
TRAF3-204ENST00000539721 LAS1LQ9Y4W2 734 aaKnown RBP21.03■□□□□ 0.96
TRAF3-204ENST00000539721 GNAI1P63096 354 aa21.02■□□□□ 0.96
TRAF3-204ENST00000539721 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
TRAF3-204ENST00000539721 FANCIQ9NVI1 1328 aa21.01■□□□□ 0.95
TRAF3-204ENST00000539721 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
TRAF3-204ENST00000539721 UNC5CLQ8IV45 518 aa21■□□□□ 0.95
TRAF3-204ENST00000539721 TNKS1BP1Q9C0C2 1729 aaKnown RBP21■□□□□ 0.95
TRAF3-204ENST00000539721 CFAP44Q96MT7 982 aa21■□□□□ 0.95
TRAF3-204ENST00000539721 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
TRAF3-204ENST00000539721 FNBP4Q8N3X1 1017 aaPredicted RBP20.99■□□□□ 0.95
TRAF3-204ENST00000539721 IL17REQ8NFR9 667 aa20.99■□□□□ 0.95
TRAF3-204ENST00000539721 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
TRAF3-204ENST00000539721 CCDC9Q9Y3X0 531 aaKnown RBP20.99■□□□□ 0.95
TRAF3-204ENST00000539721 SHANK3Q9BYB0 1731 aa20.99■□□□□ 0.95
TRAF3-204ENST00000539721 BCL9LQ86UU0 1499 aa20.99■□□□□ 0.95
TRAF3-204ENST00000539721 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
TRAF3-204ENST00000539721 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
TRAF3-204ENST00000539721 DISP2A7MBM2 1401 aa20.98■□□□□ 0.95
TRAF3-204ENST00000539721 PHKG2P15735 406 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 MPRIPQ6WCQ1 1025 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 RCAN3Q9UKA8 241 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
TRAF3-204ENST00000539721 SPATA31A5Q5VU36 1347 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 SPATA31A7Q8IWB4 1347 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 PCDH11XQ9BZA7 1347 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 PCDH11YQ9BZA8 1340 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 SCN11AQ9UI33 1791 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 ADAMTS7Q9UKP4 1686 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 USP21Q9UK80 565 aa20.97■□□□□ 0.95
TRAF3-204ENST00000539721 THRAP3Q9Y2W1 955 aaKnown RBP20.97■□□□□ 0.95
TRAF3-204ENST00000539721 LGR6Q9HBX8 967 aa20.96■□□□□ 0.95
TRAF3-204ENST00000539721 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
TRAF3-204ENST00000539721 CYP27B1O15528 508 aa20.95■□□□□ 0.94
TRAF3-204ENST00000539721 RNMTO43148 476 aaKnown RBP20.95■□□□□ 0.94
TRAF3-204ENST00000539721 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
TRAF3-204ENST00000539721 VPS72Q15906 364 aa20.95■□□□□ 0.94
TRAF3-204ENST00000539721 CHL1O00533 1208 aa20.94■□□□□ 0.94
TRAF3-204ENST00000539721 FBXO41Q8TF61 875 aa20.94■□□□□ 0.94
TRAF3-204ENST00000539721 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
TRAF3-204ENST00000539721 CDCA7Q9BWT1 371 aaPredicted RBP20.93■□□□□ 0.94
TRAF3-204ENST00000539721 AFF2P51816 1311 aa20.93■□□□□ 0.94
TRAF3-204ENST00000539721 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
TRAF3-204ENST00000539721 TEFQ10587 303 aa20.92■□□□□ 0.94
TRAF3-204ENST00000539721 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
TRAF3-204ENST00000539721 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
TRAF3-204ENST00000539721 TSPYL4Q9UJ04 414 aa20.92■□□□□ 0.94
TRAF3-204ENST00000539721 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
TRAF3-204ENST00000539721 DCAF5Q96JK2 942 aa20.91■□□□□ 0.94
TRAF3-204ENST00000539721 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
TRAF3-204ENST00000539721 BARGINQ6ZT62 677 aa20.9■□□□□ 0.94
TRAF3-204ENST00000539721 EXOC5O00471 708 aa20.9■□□□□ 0.94
TRAF3-204ENST00000539721 CT47B1P0C2W7 299 aaPredicted RBP20.9■□□□□ 0.94
TRAF3-204ENST00000539721 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
TRAF3-204ENST00000539721 TNS2Q63HR2 1409 aa20.89■□□□□ 0.94
TRAF3-204ENST00000539721 KDM3BQ7LBC6 1761 aa20.89■□□□□ 0.93
TRAF3-204ENST00000539721 MRC1P22897 1456 aa20.87■□□□□ 0.93
TRAF3-204ENST00000539721 NEFLP07196 543 aa20.87■□□□□ 0.93
TRAF3-204ENST00000539721 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
TRAF3-204ENST00000539721 DDB1Q16531 1140 aa20.86■□□□□ 0.93
TRAF3-204ENST00000539721 FAM98CQ17RN3 349 aaKnown RBP20.86■□□□□ 0.93
TRAF3-204ENST00000539721 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
TRAF3-204ENST00000539721 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
TRAF3-204ENST00000539721 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
TRAF3-204ENST00000539721 ATRNO75882 1429 aa20.85■□□□□ 0.93
TRAF3-204ENST00000539721 GLI3P10071 1580 aa20.85■□□□□ 0.93
TRAF3-204ENST00000539721 C8orf58Q8NAV2 365 aa20.85■□□□□ 0.93
TRAF3-204ENST00000539721 TRPC5Q9UL62 973 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms