RNA–Protein interactions for RNA: ENST00000539595.5

TRPT1-208, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 1,809 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-208ENST00000539595 LRRC37A3O60309 1634 aa22.85■■□□□ 1.25
TRPT1-208ENST00000539595 KIF1AQ12756 1690 aa22.85■■□□□ 1.25
TRPT1-208ENST00000539595 KCNH5Q8NCM2 988 aa22.85■■□□□ 1.25
TRPT1-208ENST00000539595 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
TRPT1-208ENST00000539595 C1orf167Q5SNV9 1468 aa22.84■■□□□ 1.25
TRPT1-208ENST00000539595 HAP1P54257 671 aaPredicted RBP22.84■■□□□ 1.25
TRPT1-208ENST00000539595 NOP58Q9Y2X3 529 aaKnown RBP22.84■■□□□ 1.25
TRPT1-208ENST00000539595 TRPM3Q9HCF6 1732 aaPredicted RBP22.83■■□□□ 1.25
TRPT1-208ENST00000539595 SLIT3O75094 1523 aa22.83■■□□□ 1.25
TRPT1-208ENST00000539595 KRT24Q2M2I5 525 aa22.83■■□□□ 1.25
TRPT1-208ENST00000539595 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
TRPT1-208ENST00000539595 XPCQ01831 940 aaPredicted RBP22.82■■□□□ 1.24
TRPT1-208ENST00000539595 API5Q9BZZ5 524 aaKnown RBP22.82■■□□□ 1.24
TRPT1-208ENST00000539595 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
TRPT1-208ENST00000539595 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
TRPT1-208ENST00000539595 CHMP4BQ9H444 224 aaKnown RBP22.8■■□□□ 1.24
TRPT1-208ENST00000539595 MSH6P52701 1360 aa22.79■■□□□ 1.24
TRPT1-208ENST00000539595 MAP3K5Q99683 1374 aa22.79■■□□□ 1.24
TRPT1-208ENST00000539595 ZBTB7BO15156 539 aaPredicted RBP22.79■■□□□ 1.24
TRPT1-208ENST00000539595 TSPYL4Q9UJ04 414 aa22.79■■□□□ 1.24
TRPT1-208ENST00000539595 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
TRPT1-208ENST00000539595 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
TRPT1-208ENST00000539595 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
TRPT1-208ENST00000539595 USP19O94966 1318 aa22.78■■□□□ 1.24
TRPT1-208ENST00000539595 MIS18AQ9NYP9 233 aa22.78■■□□□ 1.24
TRPT1-208ENST00000539595 TMEM94Q12767 1356 aa22.77■■□□□ 1.24
TRPT1-208ENST00000539595 GCP02774 474 aa22.76■■□□□ 1.23
TRPT1-208ENST00000539595 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
TRPT1-208ENST00000539595 SMC5Q8IY18 1101 aa22.76■■□□□ 1.23
TRPT1-208ENST00000539595 DCCP43146 1447 aa22.76■■□□□ 1.23
TRPT1-208ENST00000539595 MST1RQ04912 1400 aa22.76■■□□□ 1.23
TRPT1-208ENST00000539595 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
TRPT1-208ENST00000539595 ZBTB47Q9UFB7 747 aaPredicted RBP22.75■■□□□ 1.23
TRPT1-208ENST00000539595 RGS12O14924 1447 aa22.75■■□□□ 1.23
TRPT1-208ENST00000539595 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
TRPT1-208ENST00000539595 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
TRPT1-208ENST00000539595 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
TRPT1-208ENST00000539595 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
TRPT1-208ENST00000539595 ATF3P18847 181 aa22.73■■□□□ 1.23
TRPT1-208ENST00000539595 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
TRPT1-208ENST00000539595 IL17REQ8NFR9 667 aa22.72■■□□□ 1.23
TRPT1-208ENST00000539595 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
TRPT1-208ENST00000539595 RGPD2P0DJD1 1756 aa22.72■■□□□ 1.23
TRPT1-208ENST00000539595 PTPRCP08575 1304 aa22.72■■□□□ 1.23
TRPT1-208ENST00000539595 INTS3Q68E01 1043 aaKnown RBP22.71■■□□□ 1.23
TRPT1-208ENST00000539595 NCAPD2Q15021 1401 aa22.7■■□□□ 1.22
TRPT1-208ENST00000539595 C1orf115Q9H7X2 142 aa22.7■■□□□ 1.22
TRPT1-208ENST00000539595 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
TRPT1-208ENST00000539595 HSPA2P54652 639 aa22.69■■□□□ 1.22
TRPT1-208ENST00000539595 DDRGK1Q96HY6 314 aa22.69■■□□□ 1.22
TRPT1-208ENST00000539595 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
TRPT1-208ENST00000539595 BABAM1Q9NWV8 329 aa22.68■■□□□ 1.22
TRPT1-208ENST00000539595 CAMTA1Q9Y6Y1 1673 aa22.68■■□□□ 1.22
TRPT1-208ENST00000539595 SLC4A2P04920 1241 aa22.67■■□□□ 1.22
TRPT1-208ENST00000539595 NUCB1Q02818 461 aa22.67■■□□□ 1.22
TRPT1-208ENST00000539595 MED1Q15648 1581 aaPredicted RBP22.67■■□□□ 1.22
TRPT1-208ENST00000539595 CEMIPQ8WUJ3 1361 aa22.67■■□□□ 1.22
TRPT1-208ENST00000539595 TAF7Q15545 349 aaPredicted RBP22.66■■□□□ 1.22
TRPT1-208ENST00000539595 FAM208AQ9UK61 1670 aaKnown RBP22.66■■□□□ 1.22
TRPT1-208ENST00000539595 ANKRD24Q8TF21 1146 aa22.66■■□□□ 1.22
TRPT1-208ENST00000539595 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
TRPT1-208ENST00000539595 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.22
TRPT1-208ENST00000539595 SIRT2Q8IXJ6 389 aa22.64■■□□□ 1.22
TRPT1-208ENST00000539595 SOS1Q07889 1333 aaPredicted RBP22.64■■□□□ 1.22
TRPT1-208ENST00000539595 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
TRPT1-208ENST00000539595 SEC24BO95487 1268 aa22.62■■□□□ 1.21
TRPT1-208ENST00000539595 G2E3Q7L622 706 aa22.62■■□□□ 1.21
TRPT1-208ENST00000539595 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
TRPT1-208ENST00000539595 AXIN2Q9Y2T1 843 aa22.62■■□□□ 1.21
TRPT1-208ENST00000539595 PLEKHO1Q53GL0 409 aaPredicted RBP22.61■■□□□ 1.21
TRPT1-208ENST00000539595 CHD1LQ86WJ1 897 aa22.61■■□□□ 1.21
TRPT1-208ENST00000539595 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
TRPT1-208ENST00000539595 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
TRPT1-208ENST00000539595 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
TRPT1-208ENST00000539595 LNPKQ9C0E8 428 aa22.61■■□□□ 1.21
TRPT1-208ENST00000539595 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 NPHP3Q7Z494 1330 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 AKAP4Q5JQC9 854 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 PXDNQ92626 1479 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 ATP10DQ9P241 1426 aa22.6■■□□□ 1.21
TRPT1-208ENST00000539595 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
TRPT1-208ENST00000539595 TNS3Q68CZ2 1445 aa22.59■■□□□ 1.21
TRPT1-208ENST00000539595 XIRP1Q702N8 1843 aaKnown RBP22.59■■□□□ 1.21
TRPT1-208ENST00000539595 LGR6Q9HBX8 967 aa22.59■■□□□ 1.21
TRPT1-208ENST00000539595 KDM3BQ7LBC6 1761 aa22.58■■□□□ 1.21
TRPT1-208ENST00000539595 ZC3H6P61129 1189 aaKnown RBP22.58■■□□□ 1.21
TRPT1-208ENST00000539595 ERBB3P21860 1342 aa22.57■■□□□ 1.2
TRPT1-208ENST00000539595 STRCQ7RTU9 1775 aa22.57■■□□□ 1.2
TRPT1-208ENST00000539595 ANKRD45Q5TZF3 282 aa22.57■■□□□ 1.2
TRPT1-208ENST00000539595 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
TRPT1-208ENST00000539595 CCT4P50991 539 aaKnown RBP22.56■■□□□ 1.2
TRPT1-208ENST00000539595 MEIS3Q99687 375 aa22.56■■□□□ 1.2
TRPT1-208ENST00000539595 F6X3S4 739 aa22.55■■□□□ 1.2
TRPT1-208ENST00000539595 MYT1Q01538 1121 aa22.55■■□□□ 1.2
TRPT1-208ENST00000539595 FLIIQ13045 1269 aa22.55■■□□□ 1.2
TRPT1-208ENST00000539595 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
TRPT1-208ENST00000539595 CACNA1FO60840 1977 aa22.55■■□□□ 1.2
TRPT1-208ENST00000539595 C1orf141Q5JVX7 400 aa22.54■■□□□ 1.2
TRPT1-208ENST00000539595 NECTIN2Q92692 538 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms