RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 EXOC5O00471 708 aa20.37■□□□□ 0.85
PRPF19-203ENST00000539180 MTHFSP49914 203 aa20.37■□□□□ 0.85
PRPF19-203ENST00000539180 IL13P35225 146 aa20.35■□□□□ 0.85
PRPF19-203ENST00000539180 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
PRPF19-203ENST00000539180 BTAF1O14981 1849 aa20.34■□□□□ 0.85
PRPF19-203ENST00000539180 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
PRPF19-203ENST00000539180 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
PRPF19-203ENST00000539180 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.85
PRPF19-203ENST00000539180 TATP17735 454 aaPredicted RBP20.32■□□□□ 0.84
PRPF19-203ENST00000539180 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
PRPF19-203ENST00000539180 TRIM37O94972 964 aa20.3■□□□□ 0.84
PRPF19-203ENST00000539180 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
PRPF19-203ENST00000539180 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
PRPF19-203ENST00000539180 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
PRPF19-203ENST00000539180 ITGB4P16144 1822 aa20.29■□□□□ 0.84
PRPF19-203ENST00000539180 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
PRPF19-203ENST00000539180 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
PRPF19-203ENST00000539180 AEBP1Q8IUX7 1158 aa20.28■□□□□ 0.84
PRPF19-203ENST00000539180 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
PRPF19-203ENST00000539180 SF3B2Q13435 895 aaKnown RBP20.27■□□□□ 0.84
PRPF19-203ENST00000539180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.84
PRPF19-203ENST00000539180 VIRMAQ69YN4 1812 aaKnown RBP20.27■□□□□ 0.84
PRPF19-203ENST00000539180 BAG6P46379 1132 aa20.26■□□□□ 0.83
PRPF19-203ENST00000539180 PTF1AQ7RTS3 328 aa20.26■□□□□ 0.83
PRPF19-203ENST00000539180 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
PRPF19-203ENST00000539180 LY75O60449 1722 aa20.25■□□□□ 0.83
PRPF19-203ENST00000539180 CYP27B1O15528 508 aa20.25■□□□□ 0.83
PRPF19-203ENST00000539180 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
PRPF19-203ENST00000539180 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
PRPF19-203ENST00000539180 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
PRPF19-203ENST00000539180 RALBP1Q15311 655 aa20.23■□□□□ 0.83
PRPF19-203ENST00000539180 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
PRPF19-203ENST00000539180 PAPPAQ13219 1627 aa20.23■□□□□ 0.83
PRPF19-203ENST00000539180 KCNQ2O43526 872 aa20.22■□□□□ 0.83
PRPF19-203ENST00000539180 CFAP53Q96M91 514 aa20.22■□□□□ 0.83
PRPF19-203ENST00000539180 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
PRPF19-203ENST00000539180 APBA3O96018 575 aa20.21■□□□□ 0.83
PRPF19-203ENST00000539180 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
PRPF19-203ENST00000539180 ACSBG1Q96GR2 724 aa20.21■□□□□ 0.83
PRPF19-203ENST00000539180 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
PRPF19-203ENST00000539180 NKX1-1Q15270 411 aaPredicted RBP20.2■□□□□ 0.82
PRPF19-203ENST00000539180 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
PRPF19-203ENST00000539180 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
PRPF19-203ENST00000539180 PHKG2P15735 406 aa20.19■□□□□ 0.82
PRPF19-203ENST00000539180 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
PRPF19-203ENST00000539180 PLSCR1O15162 318 aa20.18■□□□□ 0.82
PRPF19-203ENST00000539180 HMOX1P09601 288 aa20.18■□□□□ 0.82
PRPF19-203ENST00000539180 EZH2Q15910 746 aaKnown RBP20.18■□□□□ 0.82
PRPF19-203ENST00000539180 MRC1P22897 1456 aa20.18■□□□□ 0.82
PRPF19-203ENST00000539180 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
PRPF19-203ENST00000539180 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
PRPF19-203ENST00000539180 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
PRPF19-203ENST00000539180 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
PRPF19-203ENST00000539180 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
PRPF19-203ENST00000539180 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.81
PRPF19-203ENST00000539180 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
PRPF19-203ENST00000539180 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
PRPF19-203ENST00000539180 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
PRPF19-203ENST00000539180 TAF1LQ8IZX4 1826 aa20.12■□□□□ 0.81
PRPF19-203ENST00000539180 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
PRPF19-203ENST00000539180 C5P01031 1676 aa20.12■□□□□ 0.81
PRPF19-203ENST00000539180 ZNF831Q5JPB2 1677 aa20.12■□□□□ 0.81
PRPF19-203ENST00000539180 CICQ96RK0 1608 aaPredicted RBP20.12■□□□□ 0.81
PRPF19-203ENST00000539180 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
PRPF19-203ENST00000539180 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
PRPF19-203ENST00000539180 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
PRPF19-203ENST00000539180 PROM2Q8N271 834 aa20.1■□□□□ 0.81
PRPF19-203ENST00000539180 SYTL4Q96C24 671 aaPredicted RBP20.1■□□□□ 0.81
PRPF19-203ENST00000539180 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
PRPF19-203ENST00000539180 CASZ1Q86V15 1759 aa20.09■□□□□ 0.81
PRPF19-203ENST00000539180 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
PRPF19-203ENST00000539180 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
PRPF19-203ENST00000539180 DCAF5Q96JK2 942 aa20.09■□□□□ 0.81
PRPF19-203ENST00000539180 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
PRPF19-203ENST00000539180 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
PRPF19-203ENST00000539180 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
PRPF19-203ENST00000539180 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
PRPF19-203ENST00000539180 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
PRPF19-203ENST00000539180 UBR2Q8IWV8 1755 aa20.07■□□□□ 0.8
PRPF19-203ENST00000539180 MAP3K5Q99683 1374 aa20.07■□□□□ 0.8
PRPF19-203ENST00000539180 FCHSD2O94868 740 aa20.06■□□□□ 0.8
PRPF19-203ENST00000539180 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
PRPF19-203ENST00000539180 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
PRPF19-203ENST00000539180 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
PRPF19-203ENST00000539180 PIGBQ92521 554 aa20.05■□□□□ 0.8
PRPF19-203ENST00000539180 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
PRPF19-203ENST00000539180 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
PRPF19-203ENST00000539180 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
PRPF19-203ENST00000539180 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
PRPF19-203ENST00000539180 TJP1Q07157 1748 aa20.04■□□□□ 0.8
PRPF19-203ENST00000539180 LRP5O75197 1615 aa20.03■□□□□ 0.8
PRPF19-203ENST00000539180 LRRC4BQ9NT99 713 aa20.03■□□□□ 0.8
PRPF19-203ENST00000539180 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
PRPF19-203ENST00000539180 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
PRPF19-203ENST00000539180 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
PRPF19-203ENST00000539180 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
PRPF19-203ENST00000539180 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
PRPF19-203ENST00000539180 RNMTO43148 476 aaKnown RBP20■□□□□ 0.79
PRPF19-203ENST00000539180 KCPQ6ZWJ8 1503 aa20■□□□□ 0.79
PRPF19-203ENST00000539180 SMARCC1Q92922 1105 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms