RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 OTUD7AQ8TE49 926 aaPredicted RBP21.03■□□□□ 0.96
C2CD3-213ENST00000539061 CHAMP1Q96JM3 812 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 KIDINS220Q9ULH0 1771 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 ERC2O15083 957 aa21.02■□□□□ 0.96
C2CD3-213ENST00000539061 GGT6Q6P531 493 aa21.02■□□□□ 0.96
C2CD3-213ENST00000539061 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.96
C2CD3-213ENST00000539061 HMOX1P09601 288 aa21.02■□□□□ 0.96
C2CD3-213ENST00000539061 C8orf58Q8NAV2 365 aa21.02■□□□□ 0.96
C2CD3-213ENST00000539061 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
C2CD3-213ENST00000539061 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
C2CD3-213ENST00000539061 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
C2CD3-213ENST00000539061 POLKQ9UBT6 870 aa21■□□□□ 0.95
C2CD3-213ENST00000539061 MCM2P49736 904 aa21■□□□□ 0.95
C2CD3-213ENST00000539061 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
C2CD3-213ENST00000539061 KNDC1Q76NI1 1749 aa21■□□□□ 0.95
C2CD3-213ENST00000539061 BRD1O95696 1058 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 LMOD3Q0VAK6 560 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 MYRIPQ8NFW9 859 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 TMX3Q96JJ7 454 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 ARID3AQ99856 593 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.99■□□□□ 0.95
C2CD3-213ENST00000539061 CCDC94Q9BW85 323 aaPredicted RBP20.99■□□□□ 0.95
C2CD3-213ENST00000539061 DIP2BQ9P265 1576 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
C2CD3-213ENST00000539061 NEK4P51957 841 aa20.98■□□□□ 0.95
C2CD3-213ENST00000539061 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
C2CD3-213ENST00000539061 DNTTIP2Q5QJE6 756 aaKnown RBP20.98■□□□□ 0.95
C2CD3-213ENST00000539061 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
C2CD3-213ENST00000539061 ATP10DQ9P241 1426 aa20.97■□□□□ 0.95
C2CD3-213ENST00000539061 SMARCA5O60264 1052 aaPredicted RBP20.97■□□□□ 0.95
C2CD3-213ENST00000539061 PHF14O94880 888 aa20.97■□□□□ 0.95
C2CD3-213ENST00000539061 NEO1Q92859 1461 aa20.97■□□□□ 0.95
C2CD3-213ENST00000539061 PRIMPOLQ96LW4 560 aa20.97■□□□□ 0.95
C2CD3-213ENST00000539061 APBB1O00213 710 aa20.95■□□□□ 0.94
C2CD3-213ENST00000539061 CUL4AQ13619 759 aa20.95■□□□□ 0.94
C2CD3-213ENST00000539061 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
C2CD3-213ENST00000539061 HMGN5P82970 282 aaKnown RBP20.95■□□□□ 0.94
C2CD3-213ENST00000539061 UVSSAQ2YD98 709 aa20.95■□□□□ 0.94
C2CD3-213ENST00000539061 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
C2CD3-213ENST00000539061 FBLN1P23142 703 aa20.94■□□□□ 0.94
C2CD3-213ENST00000539061 FAM184AQ8NB25 1140 aa20.94■□□□□ 0.94
C2CD3-213ENST00000539061 INTS4Q96HW7 963 aaKnown RBP20.94■□□□□ 0.94
C2CD3-213ENST00000539061 PIBF1Q8WXW3 757 aa20.93■□□□□ 0.94
C2CD3-213ENST00000539061 ABCC3O15438 1527 aa20.93■□□□□ 0.94
C2CD3-213ENST00000539061 PTPRMP28827 1452 aa20.93■□□□□ 0.94
C2CD3-213ENST00000539061 PIK3C2BO00750 1634 aa20.93■□□□□ 0.94
C2CD3-213ENST00000539061 HAP1P54257 671 aaPredicted RBP20.92■□□□□ 0.94
C2CD3-213ENST00000539061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
C2CD3-213ENST00000539061 CDK19Q9BWU1 502 aa20.92■□□□□ 0.94
C2CD3-213ENST00000539061 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
C2CD3-213ENST00000539061 HECW2Q9P2P5 1572 aa20.92■□□□□ 0.94
C2CD3-213ENST00000539061 IL13P35225 146 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 UTP14CQ5TAP6 766 aaKnown RBP20.91■□□□□ 0.94
C2CD3-213ENST00000539061 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 RTL1A6NKG5 1358 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 MCCP23508 829 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 RIMS2Q9UQ26 1411 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 CLTCQ00610 1675 aaKnown RBP20.91■□□□□ 0.94
C2CD3-213ENST00000539061 NOLC1Q14978 699 aaKnown RBP eCLIP20.91■□□□□ 0.94
C2CD3-213ENST00000539061 PRDM10Q9NQV6 1147 aa20.91■□□□□ 0.94
C2CD3-213ENST00000539061 GTF2F1P35269 517 aaKnown RBP eCLIP20.9■□□□□ 0.94
C2CD3-213ENST00000539061 HMMRO75330 724 aa20.9■□□□□ 0.94
C2CD3-213ENST00000539061 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
C2CD3-213ENST00000539061 PDE1AP54750 535 aa20.89■□□□□ 0.93
C2CD3-213ENST00000539061 DMTNQ08495 405 aa20.89■□□□□ 0.93
C2CD3-213ENST00000539061 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.93
C2CD3-213ENST00000539061 CPSF1Q10570 1443 aaKnown RBP20.89■□□□□ 0.93
C2CD3-213ENST00000539061 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
C2CD3-213ENST00000539061 ANAPC15P60006 121 aa20.88■□□□□ 0.93
C2CD3-213ENST00000539061 SENP3Q9H4L4 574 aaPredicted RBP20.88■□□□□ 0.93
C2CD3-213ENST00000539061 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
C2CD3-213ENST00000539061 RGS12O14924 1447 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 MEIS3Q99687 375 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 MSH6P52701 1360 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 GADD45BO75293 160 aaPredicted RBP20.87■□□□□ 0.93
C2CD3-213ENST00000539061 IDI1Q13907 227 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 USP48Q86UV5 1035 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 ESYT1Q9BSJ8 1104 aa20.87■□□□□ 0.93
C2CD3-213ENST00000539061 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 ZNF830Q96NB3 372 aaPredicted RBP20.86■□□□□ 0.93
C2CD3-213ENST00000539061 USP25Q9UHP3 1055 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 PTPRCP08575 1304 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 DCTN1Q14203 1278 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 ZNF710Q8N1W2 664 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 ARHGEF40Q8TER5 1519 aa20.86■□□□□ 0.93
C2CD3-213ENST00000539061 WDR33Q9C0J8 1336 aaKnown RBP20.85■□□□□ 0.93
C2CD3-213ENST00000539061 ZSCAN20P17040 1043 aaPredicted RBP20.85■□□□□ 0.93
C2CD3-213ENST00000539061 ADCY5O95622 1261 aa20.85■□□□□ 0.93
C2CD3-213ENST00000539061 GDPD2Q9HCC8 539 aa20.85■□□□□ 0.93
C2CD3-213ENST00000539061 MPNDQ8N594 471 aa20.84■□□□□ 0.93
C2CD3-213ENST00000539061 KIF3AQ9Y496 699 aa20.84■□□□□ 0.93
C2CD3-213ENST00000539061 LETM1O95202 739 aaPredicted RBP20.84■□□□□ 0.93
C2CD3-213ENST00000539061 FOXD4L6Q3SYB3 417 aaPredicted RBP20.84■□□□□ 0.93
C2CD3-213ENST00000539061 CCDC183Q5T5S1 534 aa20.84■□□□□ 0.93
C2CD3-213ENST00000539061 RICTORQ6R327 1708 aa20.84■□□□□ 0.93
C2CD3-213ENST00000539061 FOXD4L3Q6VB84 417 aaPredicted RBP20.84■□□□□ 0.93
C2CD3-213ENST00000539061 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
C2CD3-213ENST00000539061 SPTLC3Q9NUV7 552 aa20.84■□□□□ 0.93
C2CD3-213ENST00000539061 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms