RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 MYRIPQ8NFW9 859 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 MX1P20591 662 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 HOMER1Q86YM7 354 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 GDPD2Q9HCC8 539 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 ABCC10Q5T3U5 1492 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 LAMC1P11047 1609 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
SCAPER-203ENST00000538941 CCDC73Q6ZRK6 1079 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 CHMP4CQ96CF2 233 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
SCAPER-203ENST00000538941 ZNF830Q96NB3 372 aaPredicted RBP8.17□□□□□ -1.1
SCAPER-203ENST00000538941 UPF3BQ9BZI7 483 aaKnown RBP8.17□□□□□ -1.1
SCAPER-203ENST00000538941 IFIT2P09913 472 aaKnown RBP8.17□□□□□ -1.1
SCAPER-203ENST00000538941 UBE2HP62256 183 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 CABP1Q9NZU7 370 aa8.17□□□□□ -1.1
SCAPER-203ENST00000538941 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
SCAPER-203ENST00000538941 CDK19Q9BWU1 502 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 NAT10Q9H0A0 1025 aaKnown RBP8.16□□□□□ -1.1
SCAPER-203ENST00000538941 SPDYE4A6NLX3 237 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
SCAPER-203ENST00000538941 GNL2Q13823 731 aaKnown RBP8.16□□□□□ -1.1
SCAPER-203ENST00000538941 MNS1Q8NEH6 495 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 PUS7Q96PZ0 661 aaKnown RBP8.16□□□□□ -1.1
SCAPER-203ENST00000538941 DCTPP1Q9H773 170 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 CYP46A1Q9Y6A2 500 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 TTC37Q6PGP7 1564 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 ADCY10Q96PN6 1610 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
SCAPER-203ENST00000538941 AMPHP49418 695 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 ANAPC15P60006 121 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 CCDC30Q5VVM6 783 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 ANKRD44Q8N8A2 993 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 PTPRCP08575 1304 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 SURF6O75683 361 aaKnown RBP8.15□□□□□ -1.1
SCAPER-203ENST00000538941 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 GOLGA6L1Q8N7Z2 621 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 PIBF1Q8WXW3 757 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 TTC12Q9H892 705 aaPredicted RBP8.15□□□□□ -1.1
SCAPER-203ENST00000538941 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 NECTIN2Q92692 538 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
SCAPER-203ENST00000538941 TAOK2Q9UL54 1235 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 EXOC6BQ9Y2D4 811 aa8.15□□□□□ -1.1
SCAPER-203ENST00000538941 LARP1BQ659C4 914 aaKnown RBP8.15□□□□□ -1.11
SCAPER-203ENST00000538941 PTPRTO14522 1441 aa8.15□□□□□ -1.11
SCAPER-203ENST00000538941 KIF20AO95235 890 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 PDRG1Q9NUG6 133 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 PATL2C9JE40 543 aaKnown RBP8.14□□□□□ -1.11
SCAPER-203ENST00000538941 TNNT1P13805 278 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 PLCH2O75038 1416 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 CCP110O43303 1012 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 STX6O43752 255 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 VAMP4O75379 141 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 DHX8Q14562 1220 aaKnown RBP8.14□□□□□ -1.11
SCAPER-203ENST00000538941 TRIM35Q9UPQ4 493 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 ANKRD1Q15327 319 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 C16orf45Q96MC5 204 aaPredicted RBP8.14□□□□□ -1.11
SCAPER-203ENST00000538941 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 PPP6R1Q9UPN7 881 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 LIMCH1Q9UPQ0 1083 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 PAXBP1Q9Y5B6 917 aa8.14□□□□□ -1.11
SCAPER-203ENST00000538941 HIP1O00291 1037 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 C16orf71Q8IYS4 520 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 CWC15Q9P013 229 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 ERVK-7P63135 1459 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 PLA2R1Q13018 1463 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 TRAPPC8Q9Y2L5 1435 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 KIF2AO00139 706 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 FAM69CQ0P6D2 419 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 CLASRPQ8N2M8 674 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 ZNF518AQ6AHZ1 1483 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 KINO60870 393 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 CASTP20810 708 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 SULT6B1Q6IMI4 303 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 FEZ1Q99689 392 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 SH2B1Q9NRF2 756 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 CHD1O14646 1710 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 CD2BP2O95400 341 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 PTPN14Q15678 1187 aa8.13□□□□□ -1.11
SCAPER-203ENST00000538941 JAKMIP1Q96N16 626 aaKnown RBP8.13□□□□□ -1.11
SCAPER-203ENST00000538941 SAMD9LQ8IVG5 1584 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 KDM4AO75164 1064 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 PDE1AP54750 535 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CAMK4Q16566 473 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 C9orf78Q9NZ63 289 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 GPT2Q8TD30 523 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 NEMFO60524 1076 aa8.12□□□□□ -1.11
SCAPER-203ENST00000538941 CALRP27797 417 aaKnown RBP8.12□□□□□ -1.11
SCAPER-203ENST00000538941 GIMAP6Q6P9H5 292 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms