RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SDSP20132 328 aa22.68■■□□□ 1.22
SFSWAP-207ENST00000538548 PRIMPOLQ96LW4 560 aa22.68■■□□□ 1.22
SFSWAP-207ENST00000538548 TERF2IPQ9NYB0 399 aa22.68■■□□□ 1.22
SFSWAP-207ENST00000538548 CHAMP1Q96JM3 812 aa22.68■■□□□ 1.22
SFSWAP-207ENST00000538548 PODXL2Q9NZ53 605 aa22.68■■□□□ 1.22
SFSWAP-207ENST00000538548 NFE2L2Q16236 605 aa22.67■■□□□ 1.22
SFSWAP-207ENST00000538548 C16orf71Q8IYS4 520 aaPredicted RBP22.67■■□□□ 1.22
SFSWAP-207ENST00000538548 SYAP1Q96A49 352 aaPredicted RBP22.67■■□□□ 1.22
SFSWAP-207ENST00000538548 SRPK2P78362 688 aaKnown RBP22.66■■□□□ 1.22
SFSWAP-207ENST00000538548 HMGN5P82970 282 aaKnown RBP22.66■■□□□ 1.22
SFSWAP-207ENST00000538548 DMTNQ08495 405 aa22.66■■□□□ 1.22
SFSWAP-207ENST00000538548 ATAD2Q6PL18 1390 aa22.66■■□□□ 1.22
SFSWAP-207ENST00000538548 CAMSAP1Q5T5Y3 1602 aa22.66■■□□□ 1.22
SFSWAP-207ENST00000538548 BRD1O95696 1058 aa22.65■■□□□ 1.22
SFSWAP-207ENST00000538548 ZNF853P0CG23 659 aa22.65■■□□□ 1.22
SFSWAP-207ENST00000538548 TWISTNBQ3B726 338 aaPredicted RBP22.65■■□□□ 1.22
SFSWAP-207ENST00000538548 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
SFSWAP-207ENST00000538548 ABCC3O15438 1527 aa22.65■■□□□ 1.22
SFSWAP-207ENST00000538548 ELL2O00472 640 aaPredicted RBP22.64■■□□□ 1.22
SFSWAP-207ENST00000538548 DNTTIP2Q5QJE6 756 aaKnown RBP22.64■■□□□ 1.22
SFSWAP-207ENST00000538548 GTF2F1P35269 517 aaKnown RBP eCLIP22.64■■□□□ 1.21
SFSWAP-207ENST00000538548 ANKRD44Q8N8A2 993 aa22.64■■□□□ 1.21
SFSWAP-207ENST00000538548 OTUD7AQ8TE49 926 aaPredicted RBP22.64■■□□□ 1.21
SFSWAP-207ENST00000538548 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.21
SFSWAP-207ENST00000538548 PRDM10Q9NQV6 1147 aa22.64■■□□□ 1.21
SFSWAP-207ENST00000538548 CD163L1Q9NR16 1453 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 ERC2O15083 957 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 PHF14O94880 888 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 PIBF1Q8WXW3 757 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 MCM2P49736 904 aa22.63■■□□□ 1.21
SFSWAP-207ENST00000538548 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.219e-7■■■□□ 17.3
SFSWAP-207ENST00000538548 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 IDI1Q13907 227 aa22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 FAM184AQ8NB25 1140 aa22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 TMX3Q96JJ7 454 aa22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 ZSCAN20P17040 1043 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 FOXD4L5Q5VV16 416 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 RPAP2Q8IXW5 612 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 FOXD4L4Q8WXT5 416 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-207ENST00000538548 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
SFSWAP-207ENST00000538548 PHACTR3Q96KR7 559 aa22.61■■□□□ 1.21
SFSWAP-207ENST00000538548 UVSSAQ2YD98 709 aa22.61■■□□□ 1.21
SFSWAP-207ENST00000538548 NEK4P51957 841 aa22.6■■□□□ 1.21
SFSWAP-207ENST00000538548 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 CUL4AQ13619 759 aa22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 NOLC1Q14978 699 aaKnown RBP eCLIP22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 ZNF710Q8N1W2 664 aa22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 ZHX1Q9UKY1 873 aaPredicted RBP22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 SIGLEC1Q9BZZ2 1709 aa22.59■■□□□ 1.21
SFSWAP-207ENST00000538548 INTS4Q96HW7 963 aaKnown RBP22.58■■□□□ 1.21
SFSWAP-207ENST00000538548 CEP85Q6P2H3 762 aa22.58■■□□□ 1.2
SFSWAP-207ENST00000538548 KIF20BQ96Q89 1820 aa22.58■■□□□ 1.2
SFSWAP-207ENST00000538548 NEXMIFQ5QGS0 1516 aa22.57■■□□□ 1.2
SFSWAP-207ENST00000538548 HDGFL2Q7Z4V5 671 aaPredicted RBP22.57■■□□□ 1.2
SFSWAP-207ENST00000538548 CLTCQ00610 1675 aaKnown RBP22.56■■□□□ 1.2
SFSWAP-207ENST00000538548 SMARCA5O60264 1052 aaPredicted RBP22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 HMOX1P09601 288 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 LMOD3Q0VAK6 560 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 SPTLC3Q9NUV7 552 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 KIF3AQ9Y496 699 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 PIK3C2BO00750 1634 aa22.55■■□□□ 1.2
SFSWAP-207ENST00000538548 FKBP5Q13451 457 aaPredicted RBP22.54■■□□□ 1.2
SFSWAP-207ENST00000538548 JARID2Q92833 1246 aaPredicted RBP22.53■■□□□ 1.2
SFSWAP-207ENST00000538548 OSBPL3Q9H4L5 887 aa22.53■■□□□ 1.2
SFSWAP-207ENST00000538548 TSC1Q92574 1164 aa22.53■■□□□ 1.2
SFSWAP-207ENST00000538548 ZNF830Q96NB3 372 aaPredicted RBP22.52■■□□□ 1.2
SFSWAP-207ENST00000538548 USP25Q9UHP3 1055 aa22.52■■□□□ 1.2
SFSWAP-207ENST00000538548 ARHGEF40Q8TER5 1519 aa22.52■■□□□ 1.2
SFSWAP-207ENST00000538548 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
SFSWAP-207ENST00000538548 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 APBB1O00213 710 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 STK26Q9P289 416 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 PTPRMP28827 1452 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 RGS12O14924 1447 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 RIMS2Q9UQ26 1411 aa22.51■■□□□ 1.19
SFSWAP-207ENST00000538548 GADD45BO75293 160 aaPredicted RBP22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 ADCY5O95622 1261 aa22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 MCCP23508 829 aa22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 ANAPC15P60006 121 aa22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 TTC12Q9H892 705 aaPredicted RBP22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 MINK1Q8N4C8 1332 aaPredicted RBP22.5■■□□□ 1.19
SFSWAP-207ENST00000538548 CPSF1Q10570 1443 aaKnown RBP22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 KIF20AO95235 890 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 PPP4R3BQ5MIZ7 849 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 CBX1P83916 185 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 CCDC183Q5T5S1 534 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 STAG3Q9UJ98 1225 aa22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
SFSWAP-207ENST00000538548 PDE1AP54750 535 aa22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 MPNDQ8N594 471 aa22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 TMEM87AQ8NBN3 555 aa22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 MSH6P52701 1360 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms