RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NBPF4Q96M43 638 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 C8orf37Q96NL8 207 aa13.98□□□□□ -0.17
TNFRSF1A-211ENST00000538363 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 PLEKHO1Q53GL0 409 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-211ENST00000538363 ERBB3P21860 1342 aa13.96□□□□□ -0.17
TNFRSF1A-211ENST00000538363 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.17
TNFRSF1A-211ENST00000538363 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-211ENST00000538363 WNK3Q9BYP7 1800 aa13.95□□□□□ -0.18
TNFRSF1A-211ENST00000538363 TMPOP42166 694 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-211ENST00000538363 NFE2L2Q16236 605 aa13.95□□□□□ -0.18
TNFRSF1A-211ENST00000538363 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
TNFRSF1A-211ENST00000538363 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 FAM208AQ9UK61 1670 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 ABCC6O95255 1503 aa13.94□□□□□ -0.18
TNFRSF1A-211ENST00000538363 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 PDE3BQ13370 1112 aa13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 AMOTQ4VCS5 1084 aa13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-211ENST00000538363 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
TNFRSF1A-211ENST00000538363 A0A0G2JS52 829 aa13.91□□□□□ -0.18
TNFRSF1A-211ENST00000538363 MYT1Q01538 1121 aa13.91□□□□□ -0.18
TNFRSF1A-211ENST00000538363 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-211ENST00000538363 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
TNFRSF1A-211ENST00000538363 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-211ENST00000538363 SLIT2O94813 1529 aa13.9□□□□□ -0.18
TNFRSF1A-211ENST00000538363 IL2RBP14784 551 aa13.9□□□□□ -0.18
TNFRSF1A-211ENST00000538363 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-211ENST00000538363 USP21Q9UK80 565 aa13.9□□□□□ -0.18
TNFRSF1A-211ENST00000538363 GNAT3A8MTJ3 354 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 WWC1Q8IX03 1113 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 CRB1P82279 1406 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 AFF2P51816 1311 aa13.89□□□□□ -0.19
TNFRSF1A-211ENST00000538363 KDRP35968 1356 aa13.88□□□□□ -0.19
TNFRSF1A-211ENST00000538363 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
TNFRSF1A-211ENST00000538363 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
TNFRSF1A-211ENST00000538363 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
TNFRSF1A-211ENST00000538363 E9PSI1 815 aa13.87□□□□□ -0.19
TNFRSF1A-211ENST00000538363 GLI3P10071 1580 aa13.87□□□□□ -0.19
TNFRSF1A-211ENST00000538363 AKAP4Q5JQC9 854 aa13.86□□□□□ -0.19
TNFRSF1A-211ENST00000538363 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-211ENST00000538363 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-211ENST00000538363 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
TNFRSF1A-211ENST00000538363 EXOC5O00471 708 aa13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 MCM10Q7L590 875 aa13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-211ENST00000538363 MAP3K5Q99683 1374 aa13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 GNAI1P63096 354 aa13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 TEFQ10587 303 aa13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-211ENST00000538363 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
TNFRSF1A-211ENST00000538363 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-211ENST00000538363 ATRNO75882 1429 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 SLFN5Q08AF3 891 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 VPS72Q15906 364 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 SPATA31A1Q5TZJ5 1347 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
TNFRSF1A-211ENST00000538363 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 DDB1Q16531 1140 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 IL16Q14005 1332 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 SPATA31A5Q5VU36 1347 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 SPATA31A7Q8IWB4 1347 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
TNFRSF1A-211ENST00000538363 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
TNFRSF1A-211ENST00000538363 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-211ENST00000538363 RNMTO43148 476 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 NEFLP07196 543 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 PHKG2P15735 406 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 CABP4P57796 275 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 ZNF772Q68DY9 489 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 IFT57Q9NWB7 429 aa13.79□□□□□ -0.2
TNFRSF1A-211ENST00000538363 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms