RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
CHFR-216ENST00000538235 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
CHFR-216ENST00000538235 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
CHFR-216ENST00000538235 SCN11AQ9UI33 1791 aa17.71■□□□□ 0.43
CHFR-216ENST00000538235 DDB1Q16531 1140 aa17.7■□□□□ 0.42
CHFR-216ENST00000538235 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
CHFR-216ENST00000538235 RREB1Q92766 1687 aa17.69■□□□□ 0.42
CHFR-216ENST00000538235 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
CHFR-216ENST00000538235 RALBP1Q15311 655 aa17.69■□□□□ 0.42
CHFR-216ENST00000538235 HMOX1P09601 288 aa17.68■□□□□ 0.42
CHFR-216ENST00000538235 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHFR-216ENST00000538235 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
CHFR-216ENST00000538235 BCL9O00512 1426 aa17.67■□□□□ 0.42
CHFR-216ENST00000538235 SOCS7O14512 581 aa17.67■□□□□ 0.42
CHFR-216ENST00000538235 CYP27B1O15528 508 aa17.67■□□□□ 0.42
CHFR-216ENST00000538235 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
CHFR-216ENST00000538235 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
CHFR-216ENST00000538235 RGPD3A6NKT7 1758 aaPredicted RBP17.66■□□□□ 0.42
CHFR-216ENST00000538235 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
CHFR-216ENST00000538235 NUP188Q5SRE5 1749 aa17.66■□□□□ 0.42
CHFR-216ENST00000538235 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
CHFR-216ENST00000538235 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
CHFR-216ENST00000538235 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
CHFR-216ENST00000538235 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
CHFR-216ENST00000538235 LY75O60449 1722 aa17.64■□□□□ 0.41
CHFR-216ENST00000538235 EXOC5O00471 708 aa17.63■□□□□ 0.41
CHFR-216ENST00000538235 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
CHFR-216ENST00000538235 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
CHFR-216ENST00000538235 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
CHFR-216ENST00000538235 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
CHFR-216ENST00000538235 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
CHFR-216ENST00000538235 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
CHFR-216ENST00000538235 KCNQ2O43526 872 aa17.61■□□□□ 0.41
CHFR-216ENST00000538235 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
CHFR-216ENST00000538235 TRIM37O94972 964 aa17.6■□□□□ 0.41
CHFR-216ENST00000538235 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
CHFR-216ENST00000538235 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
CHFR-216ENST00000538235 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
CHFR-216ENST00000538235 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
CHFR-216ENST00000538235 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
CHFR-216ENST00000538235 MRC1P22897 1456 aa17.58■□□□□ 0.41
CHFR-216ENST00000538235 PHKG2P15735 406 aa17.58■□□□□ 0.4
CHFR-216ENST00000538235 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
CHFR-216ENST00000538235 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
CHFR-216ENST00000538235 DEFB132Q7Z7B7 95 aa17.58■□□□□ 0.4
CHFR-216ENST00000538235 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
CHFR-216ENST00000538235 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
CHFR-216ENST00000538235 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
CHFR-216ENST00000538235 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
CHFR-216ENST00000538235 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHFR-216ENST00000538235 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
CHFR-216ENST00000538235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHFR-216ENST00000538235 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
CHFR-216ENST00000538235 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
CHFR-216ENST00000538235 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
CHFR-216ENST00000538235 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
CHFR-216ENST00000538235 TJP1Q07157 1748 aa17.52■□□□□ 0.4
CHFR-216ENST00000538235 ANP32CO43423 234 aa17.52■□□□□ 0.4
CHFR-216ENST00000538235 C5P01031 1676 aa17.52■□□□□ 0.39
CHFR-216ENST00000538235 COL5A3P25940 1745 aaPredicted RBP17.51■□□□□ 0.39
CHFR-216ENST00000538235 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
CHFR-216ENST00000538235 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
CHFR-216ENST00000538235 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
CHFR-216ENST00000538235 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
CHFR-216ENST00000538235 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
CHFR-216ENST00000538235 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
CHFR-216ENST00000538235 LGR6Q9HBX8 967 aa17.5■□□□□ 0.39
CHFR-216ENST00000538235 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
CHFR-216ENST00000538235 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
CHFR-216ENST00000538235 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CHFR-216ENST00000538235 FCHSD2O94868 740 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
CHFR-216ENST00000538235 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
CHFR-216ENST00000538235 PROM2Q8N271 834 aa17.48■□□□□ 0.39
CHFR-216ENST00000538235 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
CHFR-216ENST00000538235 APBA3O96018 575 aa17.47■□□□□ 0.39
CHFR-216ENST00000538235 PNISRQ8TF01 805 aaKnown RBP17.47■□□□□ 0.39
CHFR-216ENST00000538235 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
CHFR-216ENST00000538235 CEMIPQ8WUJ3 1361 aa17.46■□□□□ 0.39
CHFR-216ENST00000538235 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.39
CHFR-216ENST00000538235 PIGBQ92521 554 aa17.46■□□□□ 0.39
CHFR-216ENST00000538235 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
CHFR-216ENST00000538235 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
CHFR-216ENST00000538235 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
CHFR-216ENST00000538235 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
CHFR-216ENST00000538235 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
CHFR-216ENST00000538235 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
CHFR-216ENST00000538235 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 KCNQ4P56696 695 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
CHFR-216ENST00000538235 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
CHFR-216ENST00000538235 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
CHFR-216ENST00000538235 MIER1Q8N108 512 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms