RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
LINC00346-201ENST00000538077 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 CUL7Q14999 1698 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 KIAA1107Q9UPP5 1409 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
LINC00346-201ENST00000538077 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
LINC00346-201ENST00000538077 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
LINC00346-201ENST00000538077 GPTP24298 496 aa13.24□□□□□ -0.29
LINC00346-201ENST00000538077 NME9Q86XW9 330 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 TRAK2O60296 914 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 TRMT1LQ7Z2T5 733 aaKnown RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 DHX8Q14562 1220 aaKnown RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 ARGLU1Q9NWB6 273 aaPredicted RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 CDR1P51861 262 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
LINC00346-201ENST00000538077 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
LINC00346-201ENST00000538077 DAPK1P53355 1430 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 FBXO31Q5XUX0 539 aaPredicted RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 LIG1P18858 919 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 FOXO3O43524 673 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 SSR1P43307 286 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 GRM1Q13255 1194 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 NEFHP12036 1026 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
LINC00346-201ENST00000538077 RABEP1Q15276 862 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
LINC00346-201ENST00000538077 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
LINC00346-201ENST00000538077 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
LINC00346-201ENST00000538077 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
LINC00346-201ENST00000538077 DZIP1Q86YF9 867 aaKnown RBP13.21□□□□□ -0.29
LINC00346-201ENST00000538077 FAM43AQ8N2R8 423 aa13.21□□□□□ -0.29
LINC00346-201ENST00000538077 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
LINC00346-201ENST00000538077 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.29
LINC00346-201ENST00000538077 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.3
LINC00346-201ENST00000538077 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 NEBLO76041 1014 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 STIM1Q13586 685 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 PPFIBP1Q86W92 1011 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 ZNHIT6Q9NWK9 470 aaKnown RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 F6X3S4 739 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
LINC00346-201ENST00000538077 CAMK4Q16566 473 aa13.2□□□□□ -0.3
LINC00346-201ENST00000538077 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
LINC00346-201ENST00000538077 EPRSP07814 1512 aaKnown RBP13.19□□□□□ -0.3
LINC00346-201ENST00000538077 PDCP20941 246 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00346-201ENST00000538077 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
LINC00346-201ENST00000538077 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
LINC00346-201ENST00000538077 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
LINC00346-201ENST00000538077 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 FAM193AP78312 1265 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 JMYQ8N9B5 988 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms