RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CARD10Q9BWT7 1032 aa16.11■□□□□ 0.17
DDB1-209ENST00000537877 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
DDB1-209ENST00000537877 BTG4Q9NY30 223 aa16.11■□□□□ 0.17
DDB1-209ENST00000537877 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
DDB1-209ENST00000537877 EVA1CP58658 441 aa16.1■□□□□ 0.17
DDB1-209ENST00000537877 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
DDB1-209ENST00000537877 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
DDB1-209ENST00000537877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDB1-209ENST00000537877 SLIT2O94813 1529 aa16.09■□□□□ 0.17
DDB1-209ENST00000537877 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
DDB1-209ENST00000537877 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
DDB1-209ENST00000537877 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
DDB1-209ENST00000537877 ADAMTS2O95450 1211 aa16.08■□□□□ 0.16
DDB1-209ENST00000537877 HSPA1LP34931 641 aa16.08■□□□□ 0.16
DDB1-209ENST00000537877 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
DDB1-209ENST00000537877 WNK3Q9BYP7 1800 aa16.08■□□□□ 0.16
DDB1-209ENST00000537877 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
DDB1-209ENST00000537877 ADAMTS7Q9UKP4 1686 aa16.07■□□□□ 0.16
DDB1-209ENST00000537877 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
DDB1-209ENST00000537877 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
DDB1-209ENST00000537877 LRP6O75581 1613 aa16.06■□□□□ 0.16
DDB1-209ENST00000537877 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
DDB1-209ENST00000537877 GNAI1P63096 354 aa16.06■□□□□ 0.16
DDB1-209ENST00000537877 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
DDB1-209ENST00000537877 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
DDB1-209ENST00000537877 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
DDB1-209ENST00000537877 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.06■□□□□ 0.16
DDB1-209ENST00000537877 C1orf141Q5JVX7 400 aa16.05■□□□□ 0.16
DDB1-209ENST00000537877 THUMPD2Q9BTF0 503 aaKnown RBP16.05■□□□□ 0.16
DDB1-209ENST00000537877 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
DDB1-209ENST00000537877 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 MCM10Q7L590 875 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
DDB1-209ENST00000537877 CT47B1P0C2W7 299 aaPredicted RBP16.03■□□□□ 0.16
DDB1-209ENST00000537877 IL2RBP14784 551 aa16.03■□□□□ 0.16
DDB1-209ENST00000537877 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
DDB1-209ENST00000537877 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
DDB1-209ENST00000537877 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
DDB1-209ENST00000537877 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.15
DDB1-209ENST00000537877 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
DDB1-209ENST00000537877 SCN11AQ9UI33 1791 aa16.01■□□□□ 0.15
DDB1-209ENST00000537877 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
DDB1-209ENST00000537877 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
DDB1-209ENST00000537877 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
DDB1-209ENST00000537877 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
DDB1-209ENST00000537877 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
DDB1-209ENST00000537877 CHL1O00533 1208 aa16■□□□□ 0.15
DDB1-209ENST00000537877 NEFLP07196 543 aa16■□□□□ 0.15
DDB1-209ENST00000537877 PHKG2P15735 406 aa16■□□□□ 0.15
DDB1-209ENST00000537877 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
DDB1-209ENST00000537877 IL17REQ8NFR9 667 aa16■□□□□ 0.15
DDB1-209ENST00000537877 MBIPQ9NS73 344 aa16■□□□□ 0.15
DDB1-209ENST00000537877 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
DDB1-209ENST00000537877 MRC1P22897 1456 aa15.99■□□□□ 0.15
DDB1-209ENST00000537877 SPATA31A1Q5TZJ5 1347 aa15.99■□□□□ 0.15
DDB1-209ENST00000537877 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
DDB1-209ENST00000537877 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
DDB1-209ENST00000537877 FNBP4Q8N3X1 1017 aaPredicted RBP15.99■□□□□ 0.15
DDB1-209ENST00000537877 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
DDB1-209ENST00000537877 NGLY1Q96IV0 654 aa15.99■□□□□ 0.15
DDB1-209ENST00000537877 C8orf37Q96NL8 207 aa15.99■□□□□ 0.15
DDB1-209ENST00000537877 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
DDB1-209ENST00000537877 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
DDB1-209ENST00000537877 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
DDB1-209ENST00000537877 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
DDB1-209ENST00000537877 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
DDB1-209ENST00000537877 RNMTO43148 476 aaKnown RBP15.98■□□□□ 0.15
DDB1-209ENST00000537877 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
DDB1-209ENST00000537877 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
DDB1-209ENST00000537877 TNS2Q63HR2 1409 aa15.97■□□□□ 0.15
DDB1-209ENST00000537877 CYP27B1O15528 508 aa15.97■□□□□ 0.15
DDB1-209ENST00000537877 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
DDB1-209ENST00000537877 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
DDB1-209ENST00000537877 TEFQ10587 303 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 VPS72Q15906 364 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
DDB1-209ENST00000537877 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 DCAF5Q96JK2 942 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 TSPYL4Q9UJ04 414 aa15.96■□□□□ 0.15
DDB1-209ENST00000537877 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
DDB1-209ENST00000537877 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
DDB1-209ENST00000537877 GTF3C3Q9Y5Q9 886 aa15.95■□□□□ 0.14
DDB1-209ENST00000537877 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
DDB1-209ENST00000537877 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
DDB1-209ENST00000537877 NKX1-1Q15270 411 aaPredicted RBP15.93■□□□□ 0.14
DDB1-209ENST00000537877 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.93■□□□□ 0.14
DDB1-209ENST00000537877 USP21Q9UK80 565 aa15.93■□□□□ 0.14
DDB1-209ENST00000537877 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
DDB1-209ENST00000537877 CCDC9Q9Y3X0 531 aaKnown RBP15.92■□□□□ 0.14
DDB1-209ENST00000537877 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
DDB1-209ENST00000537877 ALDH1L2Q3SY69 923 aa15.91■□□□□ 0.14
DDB1-209ENST00000537877 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
DDB1-209ENST00000537877 AFF2P51816 1311 aa15.91■□□□□ 0.14
DDB1-209ENST00000537877 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
DDB1-209ENST00000537877 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
DDB1-209ENST00000537877 ATRNO75882 1429 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms