RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 SIRT1Q96EB6 747 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 ERVH48-1M5A8F1 160 aa10.27□□□□□ -0.77
SNHG1-205ENST00000537869 TPCN2Q8NHX9 752 aa10.27□□□□□ -0.77
SNHG1-205ENST00000537869 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-205ENST00000537869 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
SNHG1-205ENST00000537869 SCTRP47872 440 aa10.26□□□□□ -0.77
SNHG1-205ENST00000537869 PSME1Q06323 249 aa10.26□□□□□ -0.77
SNHG1-205ENST00000537869 SEC13P55735 322 aa10.25□□□□□ -0.77
SNHG1-205ENST00000537869 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
SNHG1-205ENST00000537869 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
SNHG1-205ENST00000537869 GNEQ9Y223 722 aaKnown RBP10.25□□□□□ -0.77
SNHG1-205ENST00000537869 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
SNHG1-205ENST00000537869 GRM5P41594 1212 aa10.24□□□□□ -0.77
SNHG1-205ENST00000537869 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
SNHG1-205ENST00000537869 TXNDC2Q86VQ3 553 aa10.24□□□□□ -0.77
SNHG1-205ENST00000537869 SIAH2O43255 324 aa10.23□□□□□ -0.77
SNHG1-205ENST00000537869 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-205ENST00000537869 ATP2B4P23634 1241 aa10.23□□□□□ -0.77
SNHG1-205ENST00000537869 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
SNHG1-205ENST00000537869 LGR5O75473 907 aa10.22□□□□□ -0.77
SNHG1-205ENST00000537869 TLL2Q9Y6L7 1015 aa10.22□□□□□ -0.77
SNHG1-205ENST00000537869 PRMT3O60678 531 aa10.21□□□□□ -0.77
SNHG1-205ENST00000537869 FSHRP23945 695 aa10.21□□□□□ -0.77
SNHG1-205ENST00000537869 ARID4AP29374 1257 aaPredicted RBP10.21□□□□□ -0.77
SNHG1-205ENST00000537869 SCNN1AP37088 669 aa10.21□□□□□ -0.77
SNHG1-205ENST00000537869 PRIMPOLQ96LW4 560 aa10.21□□□□□ -0.77
SNHG1-205ENST00000537869 SLC19A1P41440 591 aa10.2□□□□□ -0.78
SNHG1-205ENST00000537869 ERVK-9P63128 1117 aa10.2□□□□□ -0.78
SNHG1-205ENST00000537869 MPNDQ8N594 471 aa10.2□□□□□ -0.78
SNHG1-205ENST00000537869 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-205ENST00000537869 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
SNHG1-205ENST00000537869 SND1Q7KZF4 910 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNHG1-205ENST00000537869 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.19□□□□□ -0.782e-85■□□□□ 9.7
SNHG1-205ENST00000537869 RGS22Q8NE09 1264 aa10.19□□□□□ -0.78
SNHG1-205ENST00000537869 HINFPQ9BQA5 517 aa10.19□□□□□ -0.78
SNHG1-205ENST00000537869 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
SNHG1-205ENST00000537869 CYLDQ9NQC7 956 aa10.19□□□□□ -0.78
SNHG1-205ENST00000537869 MTMR7Q9Y216 660 aa10.19□□□□□ -0.78
SNHG1-205ENST00000537869 WNT7AO00755 349 aa10.18□□□□□ -0.78
SNHG1-205ENST00000537869 OCLNQ16625 522 aa10.18□□□□□ -0.78
SNHG1-205ENST00000537869 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
SNHG1-205ENST00000537869 TSEN2Q8NCE0 465 aaKnown RBP10.18□□□□□ -0.78
SNHG1-205ENST00000537869 MRGPRX2Q96LB1 330 aa10.18□□□□□ -0.78
SNHG1-205ENST00000537869 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
SNHG1-205ENST00000537869 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
SNHG1-205ENST00000537869 DHX9Q08211 1270 aaKnown RBP10.17□□□□□ -0.78
SNHG1-205ENST00000537869 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
SNHG1-205ENST00000537869 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
SNHG1-205ENST00000537869 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
SNHG1-205ENST00000537869 ADH1CP00326 375 aa10.16□□□□□ -0.78
SNHG1-205ENST00000537869 PPP1R26Q5T8A7 1209 aaPredicted RBP10.16□□□□□ -0.78
SNHG1-205ENST00000537869 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
SNHG1-205ENST00000537869 C1orf216Q8TAB5 229 aa10.16□□□□□ -0.78
SNHG1-205ENST00000537869 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
SNHG1-205ENST00000537869 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
SNHG1-205ENST00000537869 M0R2N6 131 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 LILRA1O75019 489 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 SERPINB4P48594 390 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 NR5A1Q13285 461 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 TAS1R3Q7RTX0 852 aa10.15□□□□□ -0.78
SNHG1-205ENST00000537869 NR3C2P08235 984 aa10.14□□□□□ -0.79
SNHG1-205ENST00000537869 SCNN1DP51172 638 aa10.14□□□□□ -0.79
SNHG1-205ENST00000537869 CCDC27Q2M243 656 aa10.14□□□□□ -0.79
SNHG1-205ENST00000537869 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
SNHG1-205ENST00000537869 WEE1P30291 646 aa10.13□□□□□ -0.79
SNHG1-205ENST00000537869 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
SNHG1-205ENST00000537869 MYT1Q01538 1121 aa10.13□□□□□ -0.79
SNHG1-205ENST00000537869 GAS2L2Q8NHY3 880 aa10.13□□□□□ -0.79
SNHG1-205ENST00000537869 GDF10P55107 478 aa10.12□□□□□ -0.79
SNHG1-205ENST00000537869 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-205ENST00000537869 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-205ENST00000537869 TNS4Q8IZW8 715 aa10.11□□□□□ -0.79
SNHG1-205ENST00000537869 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
SNHG1-205ENST00000537869 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
SNHG1-205ENST00000537869 ETNK1Q9HBU6 452 aa10.11□□□□□ -0.79
SNHG1-205ENST00000537869 SERTAD1Q9UHV2 236 aa10.11□□□□□ -0.79
SNHG1-205ENST00000537869 SOWAHDA6NJG2 315 aa10.1□□□□□ -0.79
SNHG1-205ENST00000537869 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
SNHG1-205ENST00000537869 INHAP05111 366 aa10.1□□□□□ -0.79
SNHG1-205ENST00000537869 FOXC1Q12948 553 aa10.1□□□□□ -0.79
SNHG1-205ENST00000537869 ZNF697Q5TEC3 545 aa10.1□□□□□ -0.79
SNHG1-205ENST00000537869 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
SNHG1-205ENST00000537869 FKBP5Q13451 457 aaPredicted RBP10.09□□□□□ -0.79
SNHG1-205ENST00000537869 CAPN12Q6ZSI9 719 aa10.09□□□□□ -0.79
SNHG1-205ENST00000537869 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
SNHG1-205ENST00000537869 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
SNHG1-205ENST00000537869 BACH1O14867 736 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 MKNK1Q9BUB5 465 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 PKD2L1Q9P0L9 805 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 SEPT3Q9UH03 358 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
SNHG1-205ENST00000537869 ABL1P00519 1130 aa10.07□□□□□ -0.8
SNHG1-205ENST00000537869 GNRH1P01148 92 aa10.07□□□□□ -0.8
SNHG1-205ENST00000537869 NNTQ13423 1086 aa10.07□□□□□ -0.8
SNHG1-205ENST00000537869 SCG3Q8WXD2 468 aaKnown RBP10.07□□□□□ -0.8
SNHG1-205ENST00000537869 ATAD2Q6PL18 1390 aa10.06□□□□□ -0.8
SNHG1-205ENST00000537869 EPHA4P54764 986 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms