RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 GFRA3O60609 400 aa4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 VARSP26640 1264 aaKnown RBP4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 NR1H3Q13133 447 aa4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 PDXDC2PQ6P474 469 aa4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 GPKOWQ92917 476 aaPredicted RBP eCLIP4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 IRX2Q9BZI1 471 aaPredicted RBP4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 MAPKBP1O60336 1514 aa4.04□□□□□ -1.76
TNFRSF1A-210ENST00000537842 EIF4G2P78344 907 aaKnown RBP eCLIP4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 SEMA3FQ13275 785 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 NBPF20Q3BBV1 942 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 PKDCCQ504Y2 493 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 TRIM67Q6ZTA4 783 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 OCSTAMPQ9BR26 566 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 C1orf115Q9H7X2 142 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 ZNF777Q9ULD5 760 aaPredicted RBP4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 CTTNBP2Q8WZ74 1663 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 CLIP1P30622 1438 aa4.03□□□□□ -1.76
TNFRSF1A-210ENST00000537842 DIP2BQ9P265 1576 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CDK13Q14004 1512 aaKnown RBP4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 A6NJR5 290 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SOCS7O14512 581 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 NNTQ13423 1086 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 WASHC4Q2M389 1173 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 KANK4Q5T7N3 995 aaPredicted RBP4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 Q6ZNB5 142 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SH3RF1Q7Z6J0 888 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 KCTD15Q96SI1 283 aaPredicted RBP4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ARID3AQ99856 593 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 WDR7Q9Y4E6 1490 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CEP162Q5TB80 1403 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZCCHC11Q5TAX3 1644 aaKnown RBP4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 KIF13AQ9H1H9 1805 aa4.02□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZBTB7CA1YPR0 619 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PLEKHD1A6NEE1 506 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GDF9O60383 454 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RGS20O76081 388 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RAPGEF3O95398 923 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ADH1CP00326 375 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SLFNL1Q499Z3 407 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 OXLD1Q5BKU9 147 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SNIP1Q8TAD8 396 aaKnown RBP4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GLMNQ92990 594 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CALR3Q96L12 384 aaKnown RBP4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CYLDQ9NQC7 956 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GPSM3Q9Y4H4 160 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CD109Q6YHK3 1445 aa4.01□□□□□ -1.77
TNFRSF1A-210ENST00000537842 MAGI3Q5TCQ9 1506 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ST8SIA5O15466 376 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GIGYF1O75420 1035 aaPredicted RBP4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 NR3C2P08235 984 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 WDR4P57081 412 aaKnown RBP4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 INTS6LQ5JSJ4 861 aaKnown RBP4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RNF135Q8IUD6 432 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CCDC116Q8IYX3 515 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 HPS1Q92902 700 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 C1QTNF2Q9BXJ5 285 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PCDHB11Q9Y5F2 797 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CASKIN1Q8WXD9 1431 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GLI2P10070 1586 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 EFCAB5A4FU69 1503 aa4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PPRC1Q5VV67 1664 aaKnown RBP4□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RAPGEF6Q8TEU7 1601 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZNF644Q9H582 1327 aaPredicted RBP3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 FMN1Q68DA7 1419 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PIK3CDO00329 1044 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 NRG2O14511 850 aaPredicted RBP3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SIAH2O43255 324 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TRAK2O60296 914 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZIC2O95409 532 aaPredicted RBP3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 BMP1P13497 986 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SMPD1P17405 629 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PRR20EP86478 221 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PRR20CP86479 221 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PRR20DP86480 221 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PRR20BP86481 221 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PRR20AP86496 221 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 HDGFL1Q5TGJ6 251 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TRMT44Q8IYL2 757 aaKnown RBP3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 DEPDC4Q8N2C3 294 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ESF1Q9H501 851 aaKnown RBP3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZFAND3Q9H8U3 227 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TMPRSS4Q9NRS4 437 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TOR4AQ9NXH8 423 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 DOLKQ9UPQ8 538 aa3.99□□□□□ -1.77
TNFRSF1A-210ENST00000537842 SKIP12755 728 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PSME1Q06323 249 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 C6orf118Q5T5N4 469 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PPP1R26Q5T8A7 1209 aaPredicted RBP3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 AFAP1Q8N556 730 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ADAMTS19Q8TE59 1207 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZNF592Q92610 1267 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ITPKCQ96DU7 683 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CCDC97Q96F63 343 aaPredicted RBP3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CDV3Q9UKY7 258 aaKnown RBP3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CCDC9Q9Y3X0 531 aaKnown RBP3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 MAP4K5Q9Y4K4 846 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TSPOAP1O95153 1857 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 LRRIQ1Q96JM4 1722 aa3.98□□□□□ -1.77
TNFRSF1A-210ENST00000537842 TROQ12816 1431 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms