RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 GAS2L2Q8NHY3 880 aa22.19■■□□□ 1.14
SNX17-210ENST00000537606 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
SNX17-210ENST00000537606 CRB1P82279 1406 aa22.19■■□□□ 1.14
SNX17-210ENST00000537606 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
SNX17-210ENST00000537606 DDX17Q92841 729 aaKnown RBP22.18■■□□□ 1.14
SNX17-210ENST00000537606 PDZRN3Q9UPQ7 1066 aa22.18■■□□□ 1.14
SNX17-210ENST00000537606 GCP02774 474 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 NBPF6Q5VWK0 638 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 NBPF4Q96M43 638 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 KCNH5Q8NCM2 988 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 TSPYL4Q9UJ04 414 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 LTN1O94822 1766 aa22.17■■□□□ 1.14
SNX17-210ENST00000537606 USP54Q70EL1 1684 aa22.16■■□□□ 1.14
SNX17-210ENST00000537606 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
SNX17-210ENST00000537606 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
SNX17-210ENST00000537606 C1orf167Q5SNV9 1468 aa22.15■■□□□ 1.14
SNX17-210ENST00000537606 ARHGAP45Q92619 1136 aa22.15■■□□□ 1.14
SNX17-210ENST00000537606 NFAT5O94916 1531 aa22.15■■□□□ 1.14
SNX17-210ENST00000537606 ATF3P18847 181 aa22.15■■□□□ 1.14
SNX17-210ENST00000537606 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
SNX17-210ENST00000537606 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
SNX17-210ENST00000537606 NBR1Q14596 966 aa22.13■■□□□ 1.13
SNX17-210ENST00000537606 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
SNX17-210ENST00000537606 ZBTB7BO15156 539 aaPredicted RBP22.12■■□□□ 1.13
SNX17-210ENST00000537606 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
SNX17-210ENST00000537606 HDAC1Q13547 482 aaPredicted RBP22.1■■□□□ 1.13
SNX17-210ENST00000537606 ARHGEF25Q86VW2 580 aa22.1■■□□□ 1.13
SNX17-210ENST00000537606 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
SNX17-210ENST00000537606 ABCC4O15439 1325 aa22.1■■□□□ 1.13
SNX17-210ENST00000537606 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
SNX17-210ENST00000537606 ZC3H6P61129 1189 aaKnown RBP22.09■■□□□ 1.13
SNX17-210ENST00000537606 API5Q9BZZ5 524 aaKnown RBP22.09■■□□□ 1.13
SNX17-210ENST00000537606 AXIN2Q9Y2T1 843 aa22.09■■□□□ 1.13
SNX17-210ENST00000537606 SLC4A2P04920 1241 aa22.08■■□□□ 1.13
SNX17-210ENST00000537606 MSH6P52701 1360 aa22.08■■□□□ 1.13
SNX17-210ENST00000537606 MAP3K5Q99683 1374 aa22.08■■□□□ 1.12
SNX17-210ENST00000537606 HTATSF1O43719 755 aaKnown RBP22.07■■□□□ 1.12
SNX17-210ENST00000537606 SLC4A3P48751 1232 aa22.06■■□□□ 1.12
SNX17-210ENST00000537606 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
SNX17-210ENST00000537606 MST1RQ04912 1400 aa22.06■■□□□ 1.12
SNX17-210ENST00000537606 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
SNX17-210ENST00000537606 RGPD2P0DJD1 1756 aa22.05■■□□□ 1.12
SNX17-210ENST00000537606 ANKRD24Q8TF21 1146 aa22.05■■□□□ 1.12
SNX17-210ENST00000537606 KDM4FA0A1W2PPD8 638 aa22.05■■□□□ 1.12
SNX17-210ENST00000537606 SEC24BO95487 1268 aa22.05■■□□□ 1.12
SNX17-210ENST00000537606 G2E3Q7L622 706 aa22.04■■□□□ 1.12
SNX17-210ENST00000537606 LGR6Q9HBX8 967 aa22.04■■□□□ 1.12
SNX17-210ENST00000537606 SMC5Q8IY18 1101 aa22.04■■□□□ 1.12
SNX17-210ENST00000537606 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
SNX17-210ENST00000537606 USP19O94966 1318 aa22.03■■□□□ 1.12
SNX17-210ENST00000537606 TRPM3Q9HCF6 1732 aaPredicted RBP22.03■■□□□ 1.12
SNX17-210ENST00000537606 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
SNX17-210ENST00000537606 SLIT3O75094 1523 aa22.01■■□□□ 1.11
SNX17-210ENST00000537606 CADPS2Q86UW7 1296 aa22.01■■□□□ 1.11
SNX17-210ENST00000537606 SIRT2Q8IXJ6 389 aa22.01■■□□□ 1.11
SNX17-210ENST00000537606 RGS12O14924 1447 aa22■■□□□ 1.11
SNX17-210ENST00000537606 F6X3S4 739 aa21.99■■□□□ 1.11
SNX17-210ENST00000537606 ZNF530Q6P9A1 599 aaPredicted RBP21.99■■□□□ 1.11
SNX17-210ENST00000537606 MPRIPQ6WCQ1 1025 aa21.99■■□□□ 1.11
SNX17-210ENST00000537606 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
SNX17-210ENST00000537606 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
SNX17-210ENST00000537606 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
SNX17-210ENST00000537606 KIF1AQ12756 1690 aa21.99■■□□□ 1.11
SNX17-210ENST00000537606 INTS3Q68E01 1043 aaKnown RBP21.99■■□□□ 1.11
SNX17-210ENST00000537606 SLC4A10Q6U841 1118 aa21.98■■□□□ 1.11
SNX17-210ENST00000537606 PTPRCP08575 1304 aa21.97■■□□□ 1.11
SNX17-210ENST00000537606 PLEKHO1Q53GL0 409 aaPredicted RBP21.97■■□□□ 1.11
SNX17-210ENST00000537606 STK31Q9BXU1 1019 aa21.96■■□□□ 1.11
SNX17-210ENST00000537606 LRRC37A3O60309 1634 aa21.96■■□□□ 1.11
SNX17-210ENST00000537606 MED1Q15648 1581 aaPredicted RBP21.96■■□□□ 1.11
SNX17-210ENST00000537606 NUCB1Q02818 461 aa21.96■■□□□ 1.11
SNX17-210ENST00000537606 ANKRD45Q5TZF3 282 aa21.96■■□□□ 1.11
SNX17-210ENST00000537606 BCL11AQ9H165 835 aa21.96■■□□□ 1.11
SNX17-210ENST00000537606 NPHP3Q7Z494 1330 aa21.95■■□□□ 1.1
SNX17-210ENST00000537606 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.1
SNX17-210ENST00000537606 KCNQ3O43525 872 aa21.95■■□□□ 1.1
SNX17-210ENST00000537606 CHRNA2Q15822 529 aa21.95■■□□□ 1.1
SNX17-210ENST00000537606 DCCP43146 1447 aa21.95■■□□□ 1.1
SNX17-210ENST00000537606 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
SNX17-210ENST00000537606 AKAP4Q5JQC9 854 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 CHD1LQ86WJ1 897 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 MEIS3Q99687 375 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 CEMIPQ8WUJ3 1361 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 RGPD5Q99666 1765 aa21.94■■□□□ 1.1
SNX17-210ENST00000537606 ERBB3P21860 1342 aa21.93■■□□□ 1.1
SNX17-210ENST00000537606 ALS2Q96Q42 1657 aa21.93■■□□□ 1.1
SNX17-210ENST00000537606 NLRP2Q9NX02 1062 aa21.93■■□□□ 1.1
SNX17-210ENST00000537606 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
SNX17-210ENST00000537606 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
SNX17-210ENST00000537606 TEFQ10587 303 aa21.92■■□□□ 1.1
SNX17-210ENST00000537606 PXDNQ92626 1479 aa21.92■■□□□ 1.1
SNX17-210ENST00000537606 AMOTQ4VCS5 1084 aa21.92■■□□□ 1.1
SNX17-210ENST00000537606 C1orf141Q5JVX7 400 aa21.92■■□□□ 1.1
SNX17-210ENST00000537606 EIF2S2P20042 333 aaKnown RBP21.91■■□□□ 1.1
SNX17-210ENST00000537606 FLIIQ13045 1269 aa21.91■■□□□ 1.1
SNX17-210ENST00000537606 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
SNX17-210ENST00000537606 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
SNX17-210ENST00000537606 GCC1Q96CN9 775 aa21.9■■□□□ 1.1
SNX17-210ENST00000537606 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms