RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
SFSWAP-206ENST00000537582 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
SFSWAP-206ENST00000537582 CCDC9Q9Y3X0 531 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-206ENST00000537582 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.89
SFSWAP-206ENST00000537582 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.89
SFSWAP-206ENST00000537582 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.89
SFSWAP-206ENST00000537582 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.88
SFSWAP-206ENST00000537582 IL2RBP14784 551 aa20.57■□□□□ 0.88
SFSWAP-206ENST00000537582 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
SFSWAP-206ENST00000537582 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
SFSWAP-206ENST00000537582 DISP2A7MBM2 1401 aa20.56■□□□□ 0.88
SFSWAP-206ENST00000537582 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
SFSWAP-206ENST00000537582 ZNF530Q6P9A1 599 aaPredicted RBP20.56■□□□□ 0.88
SFSWAP-206ENST00000537582 MCM10Q7L590 875 aa20.56■□□□□ 0.88
SFSWAP-206ENST00000537582 VPS72Q15906 364 aa20.55■□□□□ 0.88
SFSWAP-206ENST00000537582 PARP4Q9UKK3 1724 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-206ENST00000537582 PKD1L3Q7Z443 1732 aa20.55■□□□□ 0.88
SFSWAP-206ENST00000537582 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.55■□□□□ 0.88
SFSWAP-206ENST00000537582 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
SFSWAP-206ENST00000537582 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
SFSWAP-206ENST00000537582 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
SFSWAP-206ENST00000537582 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
SFSWAP-206ENST00000537582 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
SFSWAP-206ENST00000537582 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 CYP27B1O15528 508 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 SHANK3Q9BYB0 1731 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 ATRNO75882 1429 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 FAM98CQ17RN3 349 aaKnown RBP20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 ZCRB1Q8TBF4 217 aaKnown RBP20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
SFSWAP-206ENST00000537582 GLI3P10071 1580 aa20.5■□□□□ 0.87
SFSWAP-206ENST00000537582 PHKG2P15735 406 aa20.5■□□□□ 0.87
SFSWAP-206ENST00000537582 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
SFSWAP-206ENST00000537582 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
SFSWAP-206ENST00000537582 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
SFSWAP-206ENST00000537582 SLFN5Q08AF3 891 aa20.49■□□□□ 0.87
SFSWAP-206ENST00000537582 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
SFSWAP-206ENST00000537582 C1orf141Q5JVX7 400 aa20.49■□□□□ 0.87
SFSWAP-206ENST00000537582 WDR63Q8IWG1 891 aa20.49■□□□□ 0.87
SFSWAP-206ENST00000537582 THRAP3Q9Y2W1 955 aaKnown RBP20.49■□□□□ 0.87
SFSWAP-206ENST00000537582 DDX54Q8TDD1 881 aaKnown RBP20.48■□□□□ 0.87
SFSWAP-206ENST00000537582 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
SFSWAP-206ENST00000537582 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
SFSWAP-206ENST00000537582 BARGINQ6ZT62 677 aa20.47■□□□□ 0.87
SFSWAP-206ENST00000537582 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
SFSWAP-206ENST00000537582 LRRC37A3O60309 1634 aa20.47■□□□□ 0.87
SFSWAP-206ENST00000537582 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 GJD4Q96KN9 370 aaPredicted RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 QTRT2Q9H974 415 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 LAS1LQ9Y4W2 734 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 DUSP27Q5VZP5 1158 aa20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 IFNL2Q8IZJ0 200 aa20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-206ENST00000537582 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-206ENST00000537582 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-206ENST00000537582 TRMT2AQ8IZ69 625 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-206ENST00000537582 TNS2Q63HR2 1409 aa20.45■□□□□ 0.86
SFSWAP-206ENST00000537582 E9PSI1 815 aa20.44■□□□□ 0.86
SFSWAP-206ENST00000537582 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-206ENST00000537582 CEMIPQ8WUJ3 1361 aa20.44■□□□□ 0.86
SFSWAP-206ENST00000537582 MIS18AQ9NYP9 233 aa20.43■□□□□ 0.86
SFSWAP-206ENST00000537582 ADAMTS7Q9UKP4 1686 aa20.43■□□□□ 0.86
SFSWAP-206ENST00000537582 IL16Q14005 1332 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 FANCIQ9NVI1 1328 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 EXOC5O00471 708 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 CDCA7Q9BWT1 371 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 A0A0G2JS52 829 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 MYT1Q01538 1121 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 DDB1Q16531 1140 aa20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-206ENST00000537582 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
SFSWAP-206ENST00000537582 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
SFSWAP-206ENST00000537582 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
SFSWAP-206ENST00000537582 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.86
SFSWAP-206ENST00000537582 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-206ENST00000537582 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
SFSWAP-206ENST00000537582 DCAF5Q96JK2 942 aa20.39■□□□□ 0.85
SFSWAP-206ENST00000537582 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.85
SFSWAP-206ENST00000537582 TOGARAM1Q9Y4F4 1720 aa20.39■□□□□ 0.85
SFSWAP-206ENST00000537582 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 CHL1O00533 1208 aa20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 GNAI1P63096 354 aa20.38■□□□□ 0.85
SFSWAP-206ENST00000537582 TEFQ10587 303 aa20.37■□□□□ 0.85
SFSWAP-206ENST00000537582 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-206ENST00000537582 MRC1P22897 1456 aa20.36■□□□□ 0.85
SFSWAP-206ENST00000537582 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 EXOSC9Q06265 439 aaKnown RBP20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-206ENST00000537582 KRT24Q2M2I5 525 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms