RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
GPN3-202ENST00000537466 RGPD3A6NKT7 1758 aaPredicted RBP23.59■■□□□ 1.37
GPN3-202ENST00000537466 RGPD4Q7Z3J3 1758 aa23.59■■□□□ 1.37
GPN3-202ENST00000537466 DOT1LQ8TEK3 1739 aa23.58■■□□□ 1.37
GPN3-202ENST00000537466 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.37
GPN3-202ENST00000537466 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.37
GPN3-202ENST00000537466 NUP188Q5SRE5 1749 aa23.58■■□□□ 1.36
GPN3-202ENST00000537466 CAMKK2Q96RR4 588 aa23.57■■□□□ 1.36
GPN3-202ENST00000537466 BTAF1O14981 1849 aa23.56■■□□□ 1.36
GPN3-202ENST00000537466 ZCRB1Q8TBF4 217 aaKnown RBP23.56■■□□□ 1.36
GPN3-202ENST00000537466 BCL11BQ9C0K0 894 aaPredicted RBP23.56■■□□□ 1.36
GPN3-202ENST00000537466 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
GPN3-202ENST00000537466 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
GPN3-202ENST00000537466 KCNQ2O43526 872 aa23.55■■□□□ 1.36
GPN3-202ENST00000537466 MTHFSP49914 203 aa23.52■■□□□ 1.36
GPN3-202ENST00000537466 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
GPN3-202ENST00000537466 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
GPN3-202ENST00000537466 TOGARAM1Q9Y4F4 1720 aa23.49■■□□□ 1.35
GPN3-202ENST00000537466 PLSCR1O15162 318 aa23.49■■□□□ 1.35
GPN3-202ENST00000537466 IL13P35225 146 aa23.48■■□□□ 1.35
GPN3-202ENST00000537466 ITGB4P16144 1822 aa23.47■■□□□ 1.35
GPN3-202ENST00000537466 PCDH11XQ9BZA7 1347 aa23.47■■□□□ 1.35
GPN3-202ENST00000537466 PCDH11YQ9BZA8 1340 aa23.47■■□□□ 1.35
GPN3-202ENST00000537466 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
GPN3-202ENST00000537466 CYP27B1O15528 508 aa23.46■■□□□ 1.35
GPN3-202ENST00000537466 COL3A1P02461 1466 aaPredicted RBP23.45■■□□□ 1.34
GPN3-202ENST00000537466 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
GPN3-202ENST00000537466 PROM2Q8N271 834 aa23.43■■□□□ 1.34
GPN3-202ENST00000537466 PSDA5PKW4 1024 aaPredicted RBP23.43■■□□□ 1.34
GPN3-202ENST00000537466 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
GPN3-202ENST00000537466 SPG7Q9UQ90 795 aa23.43■■□□□ 1.34
GPN3-202ENST00000537466 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
GPN3-202ENST00000537466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.344e-6■■■□□ 17.2
GPN3-202ENST00000537466 LY75O60449 1722 aa23.41■■□□□ 1.34
GPN3-202ENST00000537466 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
GPN3-202ENST00000537466 KDRP35968 1356 aa23.41■■□□□ 1.34
GPN3-202ENST00000537466 DIAPH1O60610 1272 aaKnown RBP23.39■■□□□ 1.34
GPN3-202ENST00000537466 R3HDM1Q15032 1099 aaKnown RBP23.39■■□□□ 1.34
GPN3-202ENST00000537466 TXNRD1Q16881 649 aa23.39■■□□□ 1.34
GPN3-202ENST00000537466 PLEKHG2Q9H7P9 1386 aa23.39■■□□□ 1.33
GPN3-202ENST00000537466 DDX10Q13206 875 aaKnown RBP23.38■■□□□ 1.33
GPN3-202ENST00000537466 PPP2R1AP30153 589 aa23.37■■□□□ 1.33
GPN3-202ENST00000537466 PHKG2P15735 406 aa23.36■■□□□ 1.33
GPN3-202ENST00000537466 NKX1-1Q15270 411 aaPredicted RBP23.36■■□□□ 1.33
GPN3-202ENST00000537466 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
GPN3-202ENST00000537466 PAPPAQ13219 1627 aa23.36■■□□□ 1.33
GPN3-202ENST00000537466 IFNL2Q8IZJ0 200 aa23.36■■□□□ 1.33
GPN3-202ENST00000537466 HMOX1P09601 288 aa23.35■■□□□ 1.33
GPN3-202ENST00000537466 PLEKHO1Q53GL0 409 aaPredicted RBP23.34■■□□□ 1.33
GPN3-202ENST00000537466 NBPF14Q5TI25 921 aa23.34■■□□□ 1.33
GPN3-202ENST00000537466 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
GPN3-202ENST00000537466 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
GPN3-202ENST00000537466 AMOTQ4VCS5 1084 aa23.31■■□□□ 1.32
GPN3-202ENST00000537466 ZNF530Q6P9A1 599 aaPredicted RBP23.31■■□□□ 1.32
GPN3-202ENST00000537466 SCN11AQ9UI33 1791 aa23.31■■□□□ 1.32
GPN3-202ENST00000537466 LRRC4BQ9NT99 713 aa23.3■■□□□ 1.32
GPN3-202ENST00000537466 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
GPN3-202ENST00000537466 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
GPN3-202ENST00000537466 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
GPN3-202ENST00000537466 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
GPN3-202ENST00000537466 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
GPN3-202ENST00000537466 LRP5O75197 1615 aa23.28■■□□□ 1.32
GPN3-202ENST00000537466 KCNQ4P56696 695 aa23.28■■□□□ 1.32
GPN3-202ENST00000537466 PIGBQ92521 554 aa23.28■■□□□ 1.32
GPN3-202ENST00000537466 SRCAPQ6ZRS2 3230 aa23.28■■□□□ 1.32
GPN3-202ENST00000537466 TUBGCP6Q96RT7 1819 aa23.27■■□□□ 1.32
GPN3-202ENST00000537466 C5P01031 1676 aa23.27■■□□□ 1.32
GPN3-202ENST00000537466 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
GPN3-202ENST00000537466 SLC27A3Q5K4L6 730 aa23.25■■□□□ 1.31
GPN3-202ENST00000537466 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
GPN3-202ENST00000537466 DCAF5Q96JK2 942 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 QSER1Q2KHR3 1735 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 SLC15A2Q16348 729 aa23.24■■□□□ 1.31
GPN3-202ENST00000537466 MTHFSDQ2M296 383 aaKnown RBP23.23■■□□□ 1.31
GPN3-202ENST00000537466 CCNL1Q9UK58 526 aaPredicted RBP23.23■■□□□ 1.31
GPN3-202ENST00000537466 ZNF827Q17R98 1081 aa23.22■■□□□ 1.31
GPN3-202ENST00000537466 PDGFDQ9GZP0 370 aaPredicted RBP23.22■■□□□ 1.31
GPN3-202ENST00000537466 ADAMTS7Q9UKP4 1686 aa23.21■■□□□ 1.31
GPN3-202ENST00000537466 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
GPN3-202ENST00000537466 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
GPN3-202ENST00000537466 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
GPN3-202ENST00000537466 RALBP1Q15311 655 aa23.2■■□□□ 1.3
GPN3-202ENST00000537466 ASAP1Q9ULH1 1129 aa23.2■■□□□ 1.3
GPN3-202ENST00000537466 SMARCC1Q92922 1105 aaPredicted RBP23.19■■□□□ 1.3
GPN3-202ENST00000537466 AKT1S1Q96B36 256 aa23.19■■□□□ 1.3
GPN3-202ENST00000537466 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
GPN3-202ENST00000537466 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
GPN3-202ENST00000537466 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
GPN3-202ENST00000537466 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
GPN3-202ENST00000537466 ATG3Q9NT62 314 aa23.17■■□□□ 1.3
GPN3-202ENST00000537466 CABP4P57796 275 aa23.17■■□□□ 1.3
GPN3-202ENST00000537466 LGR6Q9HBX8 967 aa23.17■■□□□ 1.3
GPN3-202ENST00000537466 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
GPN3-202ENST00000537466 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
GPN3-202ENST00000537466 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
GPN3-202ENST00000537466 MRC1P22897 1456 aa23.15■■□□□ 1.3
GPN3-202ENST00000537466 ZNF831Q5JPB2 1677 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms