RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 ALG2Q9H553 416 aa6.76□□□□□ -1.33
SNHG1-203ENST00000537024 IGF1RP08069 1367 aa6.76□□□□□ -1.33
SNHG1-203ENST00000537024 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
SNHG1-203ENST00000537024 CPS1P31327 1500 aa6.76□□□□□ -1.33
SNHG1-203ENST00000537024 CFAP74Q9C0B2 1584 aa6.75□□□□□ -1.33
SNHG1-203ENST00000537024 TOM1O60784 492 aa6.75□□□□□ -1.33
SNHG1-203ENST00000537024 LYPD8Q6UX82 237 aa6.75□□□□□ -1.33
SNHG1-203ENST00000537024 RNF19BQ6ZMZ0 732 aa6.75□□□□□ -1.33
SNHG1-203ENST00000537024 USB1Q9BQ65 265 aaKnown RBP6.75□□□□□ -1.33
SNHG1-203ENST00000537024 CCDC9Q9Y3X0 531 aaKnown RBP6.75□□□□□ -1.33
SNHG1-203ENST00000537024 ZNF142P52746 1687 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-203ENST00000537024 PLA2R1Q13018 1463 aa6.74□□□□□ -1.33
SNHG1-203ENST00000537024 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-203ENST00000537024 PALM3A6NDB9 673 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-203ENST00000537024 EIF4G2P78344 907 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-203ENST00000537024 CFAP70Q5T0N1 1121 aa6.74□□□□□ -1.33
SNHG1-203ENST00000537024 BLOC1S3Q6QNY0 202 aa6.74□□□□□ -1.33
SNHG1-203ENST00000537024 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-203ENST00000537024 C9orf84Q5VXU9 1444 aa6.74□□□□□ -1.33
SNHG1-203ENST00000537024 TCOF1Q13428 1488 aaKnown RBP6.73□□□□□ -1.33
SNHG1-203ENST00000537024 NR1I2O75469 434 aa6.73□□□□□ -1.33
SNHG1-203ENST00000537024 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-203ENST00000537024 CSB-PGBD3P0DP91 1061 aa6.73□□□□□ -1.33
SNHG1-203ENST00000537024 LMOD1P29536 600 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-203ENST00000537024 PCDHB3Q9Y5E6 796 aa6.73□□□□□ -1.33
SNHG1-203ENST00000537024 PTPRKQ15262 1439 aa6.73□□□□□ -1.33
SNHG1-203ENST00000537024 TRAPPC8Q9Y2L5 1435 aa6.73□□□□□ -1.33
SNHG1-203ENST00000537024 NR1H3Q13133 447 aa6.72□□□□□ -1.33
SNHG1-203ENST00000537024 BRICD5Q6PL45 260 aa6.72□□□□□ -1.33
SNHG1-203ENST00000537024 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
SNHG1-203ENST00000537024 SCUBE3Q8IX30 993 aa6.72□□□□□ -1.33
SNHG1-203ENST00000537024 TFIP11Q9UBB9 837 aaKnown RBP6.72□□□□□ -1.33
SNHG1-203ENST00000537024 ATP10AO60312 1499 aa6.72□□□□□ -1.33
SNHG1-203ENST00000537024 SUPT6HQ7KZ85 1726 aaKnown RBP6.71□□□□□ -1.34
SNHG1-203ENST00000537024 RANGAP1P46060 587 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-203ENST00000537024 UCN2Q96RP3 112 aa6.71□□□□□ -1.34
SNHG1-203ENST00000537024 FKBPLQ9UIM3 349 aa6.71□□□□□ -1.34
SNHG1-203ENST00000537024 USTQ9Y2C2 406 aa6.71□□□□□ -1.34
SNHG1-203ENST00000537024 MYO3AQ8NEV4 1616 aa6.7□□□□□ -1.34
SNHG1-203ENST00000537024 RNF17Q9BXT8 1623 aaKnown RBP6.7□□□□□ -1.34
SNHG1-203ENST00000537024 ZBBXA8MT70 800 aa6.7□□□□□ -1.34
SNHG1-203ENST00000537024 JUNDP17535 347 aa6.7□□□□□ -1.34
SNHG1-203ENST00000537024 PTPRNQ16849 979 aa6.7□□□□□ -1.34
SNHG1-203ENST00000537024 EMID1Q96A84 441 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-203ENST00000537024 RAPGEF2Q9Y4G8 1499 aa6.7□□□□□ -1.34
SNHG1-203ENST00000537024 CARMIL1Q5VZK9 1371 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 KIF27Q86VH2 1401 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 ATP10BO94823 1461 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 POTECB2RU33 542 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 FBXO45P0C2W1 286 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 CTHP32929 405 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 GGCXP38435 758 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 SRPK2P78362 688 aaKnown RBP6.69□□□□□ -1.34
SNHG1-203ENST00000537024 THAP11Q96EK4 314 aa6.69□□□□□ -1.34
SNHG1-203ENST00000537024 ZC3H4Q9UPT8 1303 aaKnown RBP6.69□□□□□ -1.34
SNHG1-203ENST00000537024 NPATQ14207 1427 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 SHANK2Q9UPX8 1470 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
SNHG1-203ENST00000537024 F12P00748 615 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-203ENST00000537024 COPS2P61201 443 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 MYT1Q01538 1121 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 TBC1D9Q6ZT07 1266 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 MAP10Q9P2G4 905 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-203ENST00000537024 REREQ9P2R6 1566 aa6.68□□□□□ -1.34
SNHG1-203ENST00000537024 POLR1AO95602 1720 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-203ENST00000537024 VWDEQ8N2E2 1590 aa6.67□□□□□ -1.34
SNHG1-203ENST00000537024 NEURL4Q96JN8 1562 aa6.67□□□□□ -1.34
SNHG1-203ENST00000537024 CEP170BQ9Y4F5 1589 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-203ENST00000537024 ATP9BO43861 1147 aa6.67□□□□□ -1.34
SNHG1-203ENST00000537024 CDCA8Q53HL2 280 aa6.67□□□□□ -1.34
SNHG1-203ENST00000537024 NPM2Q86SE8 214 aaKnown RBP6.67□□□□□ -1.34
SNHG1-203ENST00000537024 MROH2AA6NES4 1674 aa6.67□□□□□ -1.34
SNHG1-203ENST00000537024 AGLP35573 1532 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 LRRC7Q96NW7 1537 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 ZPR1O75312 459 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 CCNYL3P0C7X3 344 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 SLC19A1P41440 591 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 MSS51Q4VC12 460 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 ARMC2Q8NEN0 867 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 SPSB2Q99619 263 aa6.66□□□□□ -1.34
SNHG1-203ENST00000537024 SYNMO15061 1565 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 SETBP1Q9Y6X0 1596 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 DGAT1O75907 488 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 ATG7O95352 703 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 BRD1O95696 1058 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-203ENST00000537024 VRTNQ9H8Y1 702 aa6.65□□□□□ -1.34
SNHG1-203ENST00000537024 GOLGA3Q08378 1498 aa6.65□□□□□ -1.35
SNHG1-203ENST00000537024 DIP2CQ9Y2E4 1556 aa6.65□□□□□ -1.35
SNHG1-203ENST00000537024 CTTNBP2Q8WZ74 1663 aa6.65□□□□□ -1.35
SNHG1-203ENST00000537024 DXOO77932 396 aaKnown RBP6.64□□□□□ -1.35
SNHG1-203ENST00000537024 PTK2Q05397 1052 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 PKDCCQ504Y2 493 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 NFATC2IPQ8NCF5 419 aa6.64□□□□□ -1.35
SNHG1-203ENST00000537024 GPKOWQ92917 476 aaPredicted RBP eCLIP6.64□□□□□ -1.355e-32■■■■□ 19.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms