RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
YBX3-206ENST00000536823 ROCK1Q13464 1354 aa10.77□□□□□ -0.68
YBX3-206ENST00000536823 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
YBX3-206ENST00000536823 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
YBX3-206ENST00000536823 POLR1AO95602 1720 aaPredicted RBP10.77□□□□□ -0.69
YBX3-206ENST00000536823 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
YBX3-206ENST00000536823 ZBTB24O43167 697 aaPredicted RBP10.76□□□□□ -0.69
YBX3-206ENST00000536823 SMPD1P17405 629 aa10.76□□□□□ -0.69
YBX3-206ENST00000536823 PPARGC1BQ86YN6 1023 aaKnown RBP10.76□□□□□ -0.69
YBX3-206ENST00000536823 BCANQ96GW7 911 aa10.76□□□□□ -0.69
YBX3-206ENST00000536823 NEURL4Q96JN8 1562 aa10.76□□□□□ -0.69
YBX3-206ENST00000536823 UNC13BO14795 1591 aa10.75□□□□□ -0.69
YBX3-206ENST00000536823 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
YBX3-206ENST00000536823 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
YBX3-206ENST00000536823 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
YBX3-206ENST00000536823 THEMISQ8N1K5 641 aaPredicted RBP10.74□□□□□ -0.69
YBX3-206ENST00000536823 UBR1Q8IWV7 1749 aa10.73□□□□□ -0.69
YBX3-206ENST00000536823 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
YBX3-206ENST00000536823 THAP11Q96EK4 314 aa10.73□□□□□ -0.69
YBX3-206ENST00000536823 TET3O43151 1660 aa10.73□□□□□ -0.69
YBX3-206ENST00000536823 WNT7AO00755 349 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 MORN1Q5T089 497 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
YBX3-206ENST00000536823 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 NOS1P29475 1434 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 MED14O60244 1454 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 IQSEC2Q5JU85 1478 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 RPRD2Q5VT52 1461 aaKnown RBP10.72□□□□□ -0.69
YBX3-206ENST00000536823 SYNMO15061 1565 aa10.72□□□□□ -0.69
YBX3-206ENST00000536823 NUTM2FA1L443 756 aa10.71□□□□□ -0.69
YBX3-206ENST00000536823 FMNL1O95466 1100 aaPredicted RBP10.71□□□□□ -0.69
YBX3-206ENST00000536823 ANKLE2Q86XL3 938 aa10.71□□□□□ -0.69
YBX3-206ENST00000536823 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
YBX3-206ENST00000536823 ZNF335Q9H4Z2 1342 aaPredicted RBP10.71□□□□□ -0.69
YBX3-206ENST00000536823 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
YBX3-206ENST00000536823 PIK3C2BO00750 1634 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 IQGAP3Q86VI3 1631 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 SLIT1O75093 1534 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 NPHP4O75161 1426 aaPredicted RBP10.7□□□□□ -0.7
YBX3-206ENST00000536823 J3QL48 77 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 ITGAEP38570 1179 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
YBX3-206ENST00000536823 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
YBX3-206ENST00000536823 SCAF11Q99590 1463 aaKnown RBP10.69□□□□□ -0.7
YBX3-206ENST00000536823 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
YBX3-206ENST00000536823 FUT2Q10981 343 aa10.68□□□□□ -0.7
YBX3-206ENST00000536823 OATP04181 439 aa10.67□□□□□ -0.7
YBX3-206ENST00000536823 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
YBX3-206ENST00000536823 MRGPRX2Q96LB1 330 aa10.67□□□□□ -0.7
YBX3-206ENST00000536823 E9PCH4 1651 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 GMPRP36959 345 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 TRIM32Q13049 653 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 IDI1Q13907 227 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 HPS1Q92902 700 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 SLC27A5Q9Y2P5 690 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 CPS1P31327 1500 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 NAIPQ13075 1403 aa10.66□□□□□ -0.7
YBX3-206ENST00000536823 NUP155O75694 1391 aa10.65□□□□□ -0.7
YBX3-206ENST00000536823 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
YBX3-206ENST00000536823 FCHSD2O94868 740 aa10.65□□□□□ -0.7
YBX3-206ENST00000536823 LORP23490 312 aaPredicted RBP10.65□□□□□ -0.7
YBX3-206ENST00000536823 SLC52A1Q9NWF4 448 aa10.65□□□□□ -0.7
YBX3-206ENST00000536823 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.7
YBX3-206ENST00000536823 HFM1A2PYH4 1435 aa10.64□□□□□ -0.71
YBX3-206ENST00000536823 LTKP29376 864 aa10.63□□□□□ -0.71
YBX3-206ENST00000536823 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
YBX3-206ENST00000536823 IRF7Q92985 503 aa10.63□□□□□ -0.71
YBX3-206ENST00000536823 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
YBX3-206ENST00000536823 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
YBX3-206ENST00000536823 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
YBX3-206ENST00000536823 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
YBX3-206ENST00000536823 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
YBX3-206ENST00000536823 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
YBX3-206ENST00000536823 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
YBX3-206ENST00000536823 ZFYVE9O95405 1425 aa10.61□□□□□ -0.71
YBX3-206ENST00000536823 FECHP22830 423 aa10.61□□□□□ -0.71
YBX3-206ENST00000536823 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
YBX3-206ENST00000536823 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
YBX3-206ENST00000536823 STRCP1A6NGW2 1772 aa10.61□□□□□ -0.71
YBX3-206ENST00000536823 SUZ12Q15022 739 aaKnown RBP10.6□□□□□ -0.71
YBX3-206ENST00000536823 SPHKAPQ2M3C7 1700 aa10.6□□□□□ -0.71
YBX3-206ENST00000536823 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
YBX3-206ENST00000536823 RNF19BQ6ZMZ0 732 aa10.59□□□□□ -0.71
YBX3-206ENST00000536823 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
YBX3-206ENST00000536823 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
YBX3-206ENST00000536823 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
YBX3-206ENST00000536823 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
YBX3-206ENST00000536823 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
YBX3-206ENST00000536823 PLEKHG1Q9ULL1 1385 aa10.57□□□□□ -0.72
YBX3-206ENST00000536823 TRPM2O94759 1503 aa10.57□□□□□ -0.72
YBX3-206ENST00000536823 VEGFBP49765 207 aa10.56□□□□□ -0.72
YBX3-206ENST00000536823 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
YBX3-206ENST00000536823 GCGRP47871 477 aa10.55□□□□□ -0.72
YBX3-206ENST00000536823 CLTCL1P53675 1640 aa10.55□□□□□ -0.72
YBX3-206ENST00000536823 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
YBX3-206ENST00000536823 PPP1R15AO75807 674 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms