RNA–Protein interactions for RNA: ENST00000536563.1

CD4-205, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-205ENST00000536563 ACSBG1Q96GR2 724 aa20.57■□□□□ 0.88
CD4-205ENST00000536563 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
CD4-205ENST00000536563 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
CD4-205ENST00000536563 SPG7Q9UQ90 795 aa20.55■□□□□ 0.88
CD4-205ENST00000536563 TNS1Q9HBL0 1735 aaKnown RBP20.55■□□□□ 0.88
CD4-205ENST00000536563 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
CD4-205ENST00000536563 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 PLSCR1O15162 318 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 KCNQ2O43526 872 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 IGSF1Q8N6C5 1336 aa20.53■□□□□ 0.88
CD4-205ENST00000536563 IL13P35225 146 aa20.51■□□□□ 0.87
CD4-205ENST00000536563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
CD4-205ENST00000536563 DIAPH1O60610 1272 aaKnown RBP20.5■□□□□ 0.87
CD4-205ENST00000536563 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
CD4-205ENST00000536563 SBF2Q86WG5 1849 aa20.49■□□□□ 0.87
CD4-205ENST00000536563 PRIM1P49642 420 aaKnown RBP20.49■□□□□ 0.87
CD4-205ENST00000536563 NBPF14Q5TI25 921 aa20.49■□□□□ 0.87
CD4-205ENST00000536563 CYP27B1O15528 508 aa20.48■□□□□ 0.87
CD4-205ENST00000536563 PLEKHO1Q53GL0 409 aaPredicted RBP20.48■□□□□ 0.87
CD4-205ENST00000536563 SULT6B1Q6IMI4 303 aa20.48■□□□□ 0.87
CD4-205ENST00000536563 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
CD4-205ENST00000536563 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
CD4-205ENST00000536563 PLEKHG2Q9H7P9 1386 aa20.46■□□□□ 0.87
CD4-205ENST00000536563 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
CD4-205ENST00000536563 IFNL2Q8IZJ0 200 aa20.46■□□□□ 0.87
CD4-205ENST00000536563 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
CD4-205ENST00000536563 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.86
CD4-205ENST00000536563 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
CD4-205ENST00000536563 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
CD4-205ENST00000536563 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
CD4-205ENST00000536563 PHKG2P15735 406 aa20.43■□□□□ 0.86
CD4-205ENST00000536563 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
CD4-205ENST00000536563 NKX1-1Q15270 411 aaPredicted RBP20.43■□□□□ 0.86
CD4-205ENST00000536563 KAT6BQ8WYB5 2073 aa20.42■□□□□ 0.86
CD4-205ENST00000536563 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
CD4-205ENST00000536563 PROM2Q8N271 834 aa20.42■□□□□ 0.86
CD4-205ENST00000536563 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
CD4-205ENST00000536563 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
CD4-205ENST00000536563 HMOX1P09601 288 aa20.41■□□□□ 0.86
CD4-205ENST00000536563 ZNF530Q6P9A1 599 aaPredicted RBP20.41■□□□□ 0.86
CD4-205ENST00000536563 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
CD4-205ENST00000536563 KDRP35968 1356 aa20.41■□□□□ 0.86
CD4-205ENST00000536563 PKD1L3Q7Z443 1732 aa20.41■□□□□ 0.86
CD4-205ENST00000536563 MPRIPQ6WCQ1 1025 aa20.4■□□□□ 0.86
CD4-205ENST00000536563 RGPD3A6NKT7 1758 aaPredicted RBP20.39■□□□□ 0.86
CD4-205ENST00000536563 RGPD4Q7Z3J3 1758 aa20.39■□□□□ 0.86
CD4-205ENST00000536563 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.85
CD4-205ENST00000536563 RREB1Q92766 1687 aa20.38■□□□□ 0.85
CD4-205ENST00000536563 RALBP1Q15311 655 aa20.37■□□□□ 0.85
CD4-205ENST00000536563 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
CD4-205ENST00000536563 STK32BQ9NY57 414 aa20.37■□□□□ 0.85
CD4-205ENST00000536563 BTAF1O14981 1849 aa20.37■□□□□ 0.85
CD4-205ENST00000536563 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
CD4-205ENST00000536563 DCAF5Q96JK2 942 aa20.36■□□□□ 0.85
CD4-205ENST00000536563 TMOD3Q9NYL9 352 aa20.36■□□□□ 0.85
CD4-205ENST00000536563 COL3A1P02461 1466 aaPredicted RBP20.36■□□□□ 0.85
CD4-205ENST00000536563 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
CD4-205ENST00000536563 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
CD4-205ENST00000536563 PIGBQ92521 554 aa20.34■□□□□ 0.85
CD4-205ENST00000536563 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.85
CD4-205ENST00000536563 YY1P25490 414 aa20.33■□□□□ 0.85
CD4-205ENST00000536563 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
CD4-205ENST00000536563 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
CD4-205ENST00000536563 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
CD4-205ENST00000536563 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
CD4-205ENST00000536563 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
CD4-205ENST00000536563 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
CD4-205ENST00000536563 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
CD4-205ENST00000536563 CABP4P57796 275 aa20.31■□□□□ 0.84
CD4-205ENST00000536563 SLC15A2Q16348 729 aa20.31■□□□□ 0.84
CD4-205ENST00000536563 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
CD4-205ENST00000536563 LRP5O75197 1615 aa20.31■□□□□ 0.84
CD4-205ENST00000536563 PALLDQ8WX93 1383 aa20.3■□□□□ 0.84
CD4-205ENST00000536563 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
CD4-205ENST00000536563 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
CD4-205ENST00000536563 KCNQ4P56696 695 aa20.28■□□□□ 0.84
CD4-205ENST00000536563 GAS2L2Q8NHY3 880 aa20.28■□□□□ 0.84
CD4-205ENST00000536563 FCHSD2O94868 740 aa20.27■□□□□ 0.84
CD4-205ENST00000536563 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
CD4-205ENST00000536563 TOGARAM1Q9Y4F4 1720 aa20.27■□□□□ 0.83
CD4-205ENST00000536563 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
CD4-205ENST00000536563 ASAP1Q9ULH1 1129 aa20.26■□□□□ 0.83
CD4-205ENST00000536563 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
CD4-205ENST00000536563 MYBBP1AQ9BQG0 1328 aaKnown RBP20.26■□□□□ 0.83
CD4-205ENST00000536563 ATG3Q9NT62 314 aa20.25■□□□□ 0.83
CD4-205ENST00000536563 RNMTO43148 476 aaKnown RBP20.24■□□□□ 0.83
CD4-205ENST00000536563 NEFMP07197 916 aa20.24■□□□□ 0.83
CD4-205ENST00000536563 NFATC2IPQ8NCF5 419 aa20.24■□□□□ 0.83
CD4-205ENST00000536563 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
CD4-205ENST00000536563 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
CD4-205ENST00000536563 ITGB4P16144 1822 aa20.23■□□□□ 0.83
CD4-205ENST00000536563 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
CD4-205ENST00000536563 SIK1P57059 783 aa20.23■□□□□ 0.83
CD4-205ENST00000536563 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
CD4-205ENST00000536563 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
CD4-205ENST00000536563 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
CD4-205ENST00000536563 PNNQ9H307 717 aaKnown RBP20.22■□□□□ 0.83
CD4-205ENST00000536563 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms