RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 KIAA0232Q92628 1395 aa29.02■■■□□ 2.24
HMGA2-206ENST00000536545 ARHGEF25Q86VW2 580 aa29.02■■■□□ 2.24
HMGA2-206ENST00000536545 MED1Q15648 1581 aaPredicted RBP29.02■■■□□ 2.24
HMGA2-206ENST00000536545 MSH6P52701 1360 aa29.01■■■□□ 2.24
HMGA2-206ENST00000536545 CAMTA1Q9Y6Y1 1673 aa29.01■■■□□ 2.23
HMGA2-206ENST00000536545 HTATSF1O43719 755 aaKnown RBP29.01■■■□□ 2.23
HMGA2-206ENST00000536545 CADPS2Q86UW7 1296 aa29.01■■■□□ 2.23
HMGA2-206ENST00000536545 PCDHB15Q9Y5E8 787 aa29.01■■■□□ 2.23
HMGA2-206ENST00000536545 NCAPD2Q15021 1401 aa29.01■■■□□ 2.23
HMGA2-206ENST00000536545 RTF1Q92541 710 aaKnown RBP28.99■■■□□ 2.23
HMGA2-206ENST00000536545 DDX19BQ9UMR2 479 aa28.99■■■□□ 2.23
HMGA2-206ENST00000536545 RGPD2P0DJD1 1756 aa28.99■■■□□ 2.23
HMGA2-206ENST00000536545 ARHGAP45Q92619 1136 aa28.98■■■□□ 2.23
HMGA2-206ENST00000536545 MAP3K5Q99683 1374 aa28.98■■■□□ 2.23
HMGA2-206ENST00000536545 ELL2O00472 640 aaPredicted RBP28.98■■■□□ 2.23
HMGA2-206ENST00000536545 TMEM57Q8N5G2 664 aa28.98■■■□□ 2.23
HMGA2-206ENST00000536545 ITPRIPQ8IWB1 547 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 USHBP1Q8N6Y0 703 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 PXDNQ92626 1479 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 NBPF6Q5VWK0 638 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 LMOD2Q6P5Q4 547 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 NBPF4Q96M43 638 aa28.96■■■□□ 2.23
HMGA2-206ENST00000536545 GNAT3A8MTJ3 354 aa28.94■■■□□ 2.22
HMGA2-206ENST00000536545 NPHP3Q7Z494 1330 aa28.93■■■□□ 2.22
HMGA2-206ENST00000536545 ZBTB7CA1YPR0 619 aa28.93■■■□□ 2.22
HMGA2-206ENST00000536545 TNS3Q68CZ2 1445 aa28.93■■■□□ 2.22
HMGA2-206ENST00000536545 HAP1P54257 671 aaPredicted RBP28.93■■■□□ 2.22
HMGA2-206ENST00000536545 ABCC4O15439 1325 aa28.92■■■□□ 2.22
HMGA2-206ENST00000536545 PDE4AP27815 886 aa28.92■■■□□ 2.22
HMGA2-206ENST00000536545 KRT24Q2M2I5 525 aa28.92■■■□□ 2.22
HMGA2-206ENST00000536545 CRYBG1Q9Y4K1 1723 aa28.91■■■□□ 2.22
HMGA2-206ENST00000536545 BACH2Q9BYV9 841 aa28.9■■■□□ 2.22
HMGA2-206ENST00000536545 LMO7Q8WWI1 1683 aa28.9■■■□□ 2.22
HMGA2-206ENST00000536545 DDX17Q92841 729 aaKnown RBP28.9■■■□□ 2.22
HMGA2-206ENST00000536545 ZBTB40Q9NUA8 1239 aa28.89■■■□□ 2.22
HMGA2-206ENST00000536545 TSPYL4Q9UJ04 414 aa28.89■■■□□ 2.22
HMGA2-206ENST00000536545 LRRC59Q96AG4 307 aaKnown RBP28.88■■■□□ 2.21
HMGA2-206ENST00000536545 RWDD1Q9H446 243 aaPredicted RBP28.88■■■□□ 2.21
HMGA2-206ENST00000536545 ANKRD24Q8TF21 1146 aa28.87■■■□□ 2.21
HMGA2-206ENST00000536545 ABCC6O95255 1503 aa28.86■■■□□ 2.21
HMGA2-206ENST00000536545 API5Q9BZZ5 524 aaKnown RBP28.86■■■□□ 2.21
HMGA2-206ENST00000536545 MIS18AQ9NYP9 233 aa28.86■■■□□ 2.21
HMGA2-206ENST00000536545 RGPD5Q99666 1765 aa28.86■■■□□ 2.21
HMGA2-206ENST00000536545 PLEKHG5O94827 1062 aa28.85■■■□□ 2.21
HMGA2-206ENST00000536545 IL17REQ8NFR9 667 aa28.85■■■□□ 2.21
HMGA2-206ENST00000536545 ZNF335Q9H4Z2 1342 aaPredicted RBP28.85■■■□□ 2.21
HMGA2-206ENST00000536545 RGS12O14924 1447 aa28.85■■■□□ 2.21
HMGA2-206ENST00000536545 COL18A1P39060 1754 aa28.85■■■□□ 2.21
HMGA2-206ENST00000536545 CEMIPQ8WUJ3 1361 aa28.85■■■□□ 2.21
HMGA2-206ENST00000536545 HDAC1Q13547 482 aaPredicted RBP28.84■■■□□ 2.21
HMGA2-206ENST00000536545 AXIN2Q9Y2T1 843 aa28.84■■■□□ 2.21
HMGA2-206ENST00000536545 BABAM1Q9NWV8 329 aa28.83■■■□□ 2.21
HMGA2-206ENST00000536545 RGS3P49796 1198 aa28.83■■■□□ 2.21
HMGA2-206ENST00000536545 ERBB3P21860 1342 aa28.82■■■□□ 2.2
HMGA2-206ENST00000536545 SPATA31A3Q5VYP0 1347 aa28.82■■■□□ 2.2
HMGA2-206ENST00000536545 FAM208AQ9UK61 1670 aaKnown RBP28.81■■■□□ 2.2
HMGA2-206ENST00000536545 BRINP3Q76B58 766 aa28.81■■■□□ 2.2
HMGA2-206ENST00000536545 CHMP4BQ9H444 224 aaKnown RBP28.79■■■□□ 2.2
HMGA2-206ENST00000536545 ZBTB7BO15156 539 aaPredicted RBP28.78■■■□□ 2.2
HMGA2-206ENST00000536545 ZC3H6P61129 1189 aaKnown RBP28.78■■■□□ 2.2
HMGA2-206ENST00000536545 PTPRCP08575 1304 aa28.77■■■□□ 2.2
HMGA2-206ENST00000536545 OVOS2A0A0G2JMS6 1433 aa28.77■■■□□ 2.2
HMGA2-206ENST00000536545 KDM3BQ7LBC6 1761 aa28.77■■■□□ 2.2
HMGA2-206ENST00000536545 TAF7Q15545 349 aaPredicted RBP28.77■■■□□ 2.2
HMGA2-206ENST00000536545 AMOTQ4VCS5 1084 aa28.77■■■□□ 2.2
HMGA2-206ENST00000536545 PLEKHO1Q53GL0 409 aaPredicted RBP28.77■■■□□ 2.2
HMGA2-206ENST00000536545 PDZRN3Q9UPQ7 1066 aa28.76■■■□□ 2.19
HMGA2-206ENST00000536545 SOS1Q07889 1333 aaPredicted RBP28.76■■■□□ 2.19
HMGA2-206ENST00000536545 FAM161AQ3B820 660 aa28.75■■■□□ 2.19
HMGA2-206ENST00000536545 ZNF530Q6P9A1 599 aaPredicted RBP28.75■■■□□ 2.19
HMGA2-206ENST00000536545 CPDO75976 1380 aa28.75■■■□□ 2.19
HMGA2-206ENST00000536545 C8orf34Q49A92 452 aa28.75■■■□□ 2.19
HMGA2-206ENST00000536545 AKAP4Q5JQC9 854 aa28.75■■■□□ 2.19
HMGA2-206ENST00000536545 VIRMAQ69YN4 1812 aaKnown RBP28.74■■■□□ 2.19
HMGA2-206ENST00000536545 MSH5O43196 834 aa28.73■■■□□ 2.19
HMGA2-206ENST00000536545 INTS3Q68E01 1043 aaKnown RBP28.73■■■□□ 2.19
HMGA2-206ENST00000536545 ADAMTS7Q9UKP4 1686 aa28.73■■■□□ 2.19
HMGA2-206ENST00000536545 SMC5Q8IY18 1101 aa28.72■■■□□ 2.19
HMGA2-206ENST00000536545 CABLES1Q8TDN4 633 aa28.71■■■□□ 2.19
HMGA2-206ENST00000536545 SOS2Q07890 1332 aaPredicted RBP28.71■■■□□ 2.19
HMGA2-206ENST00000536545 ANP32AP39687 249 aaKnown RBP28.7■■■□□ 2.19
HMGA2-206ENST00000536545 SLAIN2Q9P270 581 aa28.7■■■□□ 2.19
HMGA2-206ENST00000536545 SLC4A2P04920 1241 aa28.7■■■□□ 2.18
HMGA2-206ENST00000536545 LGR6Q9HBX8 967 aa28.7■■■□□ 2.18
HMGA2-206ENST00000536545 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
HMGA2-206ENST00000536545 ABCA3Q99758 1704 aa28.67■■■□□ 2.18
HMGA2-206ENST00000536545 NHSL1Q5SYE7 1610 aa28.66■■■□□ 2.18
HMGA2-206ENST00000536545 SIPA1L3O60292 1781 aaPredicted RBP28.66■■■□□ 2.18
HMGA2-206ENST00000536545 CACNA1FO60840 1977 aa28.66■■■□□ 2.18
HMGA2-206ENST00000536545 C1orf141Q5JVX7 400 aa28.65■■■□□ 2.18
HMGA2-206ENST00000536545 CCDC30Q5VVM6 783 aa28.65■■■□□ 2.18
HMGA2-206ENST00000536545 RNMTO43148 476 aaKnown RBP28.65■■■□□ 2.18
HMGA2-206ENST00000536545 G2E3Q7L622 706 aa28.65■■■□□ 2.18
HMGA2-206ENST00000536545 C1orf115Q9H7X2 142 aa28.65■■■□□ 2.18
HMGA2-206ENST00000536545 MEGF6O75095 1541 aa28.64■■■□□ 2.18
HMGA2-206ENST00000536545 STK31Q9BXU1 1019 aa28.64■■■□□ 2.18
HMGA2-206ENST00000536545 N4BP2Q86UW6 1770 aaPredicted RBP28.63■■■□□ 2.17
HMGA2-206ENST00000536545 MPRIPQ6WCQ1 1025 aa28.62■■■□□ 2.17
HMGA2-206ENST00000536545 NLRP2Q9NX02 1062 aa28.62■■■□□ 2.17
HMGA2-206ENST00000536545 CHRNA2Q15822 529 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms