RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 LTN1O94822 1766 aa10.77□□□□□ -0.69
PRKCH-202ENST00000536400 USP31Q70CQ4 1352 aa10.77□□□□□ -0.69
PRKCH-202ENST00000536400 MON2Q7Z3U7 1717 aa10.76□□□□□ -0.69
PRKCH-202ENST00000536400 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
PRKCH-202ENST00000536400 HSPA6P17066 643 aa10.76□□□□□ -0.69
PRKCH-202ENST00000536400 ADCY9O60503 1353 aa10.75□□□□□ -0.69
PRKCH-202ENST00000536400 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
PRKCH-202ENST00000536400 KCNQ4P56696 695 aa10.74□□□□□ -0.69
PRKCH-202ENST00000536400 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
PRKCH-202ENST00000536400 GPBP1L1Q9HC44 474 aaPredicted RBP10.74□□□□□ -0.69
PRKCH-202ENST00000536400 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-202ENST00000536400 NSD2O96028 1365 aa10.73□□□□□ -0.69
PRKCH-202ENST00000536400 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
PRKCH-202ENST00000536400 DOT1LQ8TEK3 1739 aa10.72□□□□□ -0.69
PRKCH-202ENST00000536400 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
PRKCH-202ENST00000536400 DDX54Q8TDD1 881 aaKnown RBP10.72□□□□□ -0.69
PRKCH-202ENST00000536400 CD2APQ9Y5K6 639 aa10.72□□□□□ -0.69
PRKCH-202ENST00000536400 NME9Q86XW9 330 aa10.71□□□□□ -0.69
PRKCH-202ENST00000536400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.71□□□□□ -0.69
PRKCH-202ENST00000536400 CD163L1Q9NR16 1453 aa10.71□□□□□ -0.69
PRKCH-202ENST00000536400 FAM208AQ9UK61 1670 aaKnown RBP10.71□□□□□ -0.69
PRKCH-202ENST00000536400 SBNO2Q9Y2G9 1366 aa10.71□□□□□ -0.69
PRKCH-202ENST00000536400 SYTL4Q96C24 671 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-202ENST00000536400 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-202ENST00000536400 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
PRKCH-202ENST00000536400 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-202ENST00000536400 IP6K1Q92551 441 aa10.69□□□□□ -0.7
PRKCH-202ENST00000536400 PCNTO95613 3336 aa10.68□□□□□ -0.7
PRKCH-202ENST00000536400 KIF3CO14782 793 aa10.68□□□□□ -0.7
PRKCH-202ENST00000536400 TAF1LQ8IZX4 1826 aa10.68□□□□□ -0.7
PRKCH-202ENST00000536400 C5P01031 1676 aa10.67□□□□□ -0.7
PRKCH-202ENST00000536400 ZCRB1Q8TBF4 217 aaKnown RBP10.67□□□□□ -0.7
PRKCH-202ENST00000536400 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
PRKCH-202ENST00000536400 USP47Q96K76 1375 aa10.66□□□□□ -0.7
PRKCH-202ENST00000536400 DNAJC5GQ8N7S2 189 aa10.66□□□□□ -0.7
PRKCH-202ENST00000536400 FLAD1Q8NFF5 587 aa10.66□□□□□ -0.7
PRKCH-202ENST00000536400 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
PRKCH-202ENST00000536400 LTV1Q96GA3 475 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-202ENST00000536400 EDC4Q6P2E9 1401 aaKnown RBP10.66□□□□□ -0.7
PRKCH-202ENST00000536400 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.7
PRKCH-202ENST00000536400 MEGF6O75095 1541 aa10.65□□□□□ -0.7
PRKCH-202ENST00000536400 APLP1P51693 650 aa10.65□□□□□ -0.7
PRKCH-202ENST00000536400 IGSF1Q8N6C5 1336 aa10.64□□□□□ -0.71
PRKCH-202ENST00000536400 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
PRKCH-202ENST00000536400 HDGFL2Q7Z4V5 671 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-202ENST00000536400 CICQ96RK0 1608 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-202ENST00000536400 UBR3Q6ZT12 1888 aa10.64□□□□□ -0.71
PRKCH-202ENST00000536400 HOXC9P31274 260 aa10.63□□□□□ -0.71
PRKCH-202ENST00000536400 AMIGO3Q86WK7 504 aa10.63□□□□□ -0.71
PRKCH-202ENST00000536400 SLC12A5Q9H2X9 1139 aa10.63□□□□□ -0.71
PRKCH-202ENST00000536400 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
PRKCH-202ENST00000536400 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
PRKCH-202ENST00000536400 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
PRKCH-202ENST00000536400 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
PRKCH-202ENST00000536400 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
PRKCH-202ENST00000536400 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
PRKCH-202ENST00000536400 PALLDQ8WX93 1383 aa10.62□□□□□ -0.71
PRKCH-202ENST00000536400 TOMM70O94826 608 aa10.61□□□□□ -0.71
PRKCH-202ENST00000536400 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
PRKCH-202ENST00000536400 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
PRKCH-202ENST00000536400 NBPF6Q5VWK0 638 aa10.6□□□□□ -0.71
PRKCH-202ENST00000536400 NBPF4Q96M43 638 aa10.6□□□□□ -0.71
PRKCH-202ENST00000536400 ITGB4P16144 1822 aa10.6□□□□□ -0.71
PRKCH-202ENST00000536400 WDR90Q96KV7 1748 aa10.59□□□□□ -0.71
PRKCH-202ENST00000536400 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
PRKCH-202ENST00000536400 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
PRKCH-202ENST00000536400 FBLN1P23142 703 aa10.59□□□□□ -0.71
PRKCH-202ENST00000536400 AMPHP49418 695 aa10.59□□□□□ -0.71
PRKCH-202ENST00000536400 AK7Q96M32 723 aa10.59□□□□□ -0.71
PRKCH-202ENST00000536400 PUS7Q96PZ0 661 aaKnown RBP10.59□□□□□ -0.71
PRKCH-202ENST00000536400 KIAA1551Q9HCM1 1747 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 RTL1A6NKG5 1358 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
PRKCH-202ENST00000536400 SSFA2P28290 1259 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 SMIM5Q71RC9 77 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 COG3Q96JB2 828 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
PRKCH-202ENST00000536400 PHF14O94880 888 aa10.57□□□□□ -0.72
PRKCH-202ENST00000536400 COL13A1Q5TAT6 717 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-202ENST00000536400 USHBP1Q8N6Y0 703 aa10.57□□□□□ -0.72
PRKCH-202ENST00000536400 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
PRKCH-202ENST00000536400 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
PRKCH-202ENST00000536400 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-202ENST00000536400 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
PRKCH-202ENST00000536400 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-202ENST00000536400 FKBP8Q14318 412 aa10.56□□□□□ -0.72
PRKCH-202ENST00000536400 RBM46Q8TBY0 533 aaKnown RBP10.56□□□□□ -0.72
PRKCH-202ENST00000536400 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
PRKCH-202ENST00000536400 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
PRKCH-202ENST00000536400 N4BP2Q86UW6 1770 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-202ENST00000536400 CYP27B1O15528 508 aa10.55□□□□□ -0.72
PRKCH-202ENST00000536400 TGFB2P61812 414 aa10.55□□□□□ -0.72
PRKCH-202ENST00000536400 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
PRKCH-202ENST00000536400 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
PRKCH-202ENST00000536400 NMRK2Q9NPI5 230 aa10.55□□□□□ -0.72
PRKCH-202ENST00000536400 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
PRKCH-202ENST00000536400 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms