RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 C19orf44Q9H6X5 657 aa27.01■■□□□ 1.91
TRIM3-214ENST00000536344 C8orf58Q8NAV2 365 aa27■■□□□ 1.91
TRIM3-214ENST00000536344 SPRYD3Q8NCJ5 442 aa27■■□□□ 1.91
TRIM3-214ENST00000536344 MARF1Q9Y4F3 1742 aaKnown RBP26.99■■□□□ 1.91
TRIM3-214ENST00000536344 HSP90AA1P07900 732 aaKnown RBP26.99■■□□□ 1.91
TRIM3-214ENST00000536344 TRIM27P14373 513 aa26.99■■□□□ 1.91
TRIM3-214ENST00000536344 ZKSCAN2Q63HK3 967 aa26.99■■□□□ 1.91
TRIM3-214ENST00000536344 ATF3P18847 181 aa26.98■■□□□ 1.91
TRIM3-214ENST00000536344 GNAI1P63096 354 aa26.98■■□□□ 1.91
TRIM3-214ENST00000536344 KRT28Q7Z3Y7 464 aa26.98■■□□□ 1.91
TRIM3-214ENST00000536344 ANTXR1Q9H6X2 564 aa26.96■■□□□ 1.91
TRIM3-214ENST00000536344 LRRC59Q96AG4 307 aaKnown RBP26.96■■□□□ 1.91
TRIM3-214ENST00000536344 IFT57Q9NWB7 429 aa26.96■■□□□ 1.91
TRIM3-214ENST00000536344 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.91
TRIM3-214ENST00000536344 CLCN1P35523 988 aa26.95■■□□□ 1.9
TRIM3-214ENST00000536344 DZIP1LQ8IYY4 767 aaKnown RBP26.95■■□□□ 1.9
TRIM3-214ENST00000536344 CFAP44Q96MT7 982 aa26.95■■□□□ 1.9
TRIM3-214ENST00000536344 VAMP4O75379 141 aa26.95■■□□□ 1.9
TRIM3-214ENST00000536344 LMOD3Q0VAK6 560 aa26.95■■□□□ 1.9
TRIM3-214ENST00000536344 ITPRIPQ8IWB1 547 aa26.94■■□□□ 1.9
TRIM3-214ENST00000536344 ZNF853P0CG23 659 aa26.94■■□□□ 1.9
TRIM3-214ENST00000536344 PCDHB15Q9Y5E8 787 aa26.94■■□□□ 1.9
TRIM3-214ENST00000536344 IGSF1Q8N6C5 1336 aa26.93■■□□□ 1.9
TRIM3-214ENST00000536344 GOLGA6L3A6NEY3 463 aa26.93■■□□□ 1.9
TRIM3-214ENST00000536344 GCP02774 474 aa26.93■■□□□ 1.9
TRIM3-214ENST00000536344 ZC3H6P61129 1189 aaKnown RBP26.93■■□□□ 1.9
TRIM3-214ENST00000536344 TWISTNBQ3B726 338 aaPredicted RBP26.93■■□□□ 1.9
TRIM3-214ENST00000536344 C1orf167Q5SNV9 1468 aa26.92■■□□□ 1.9
TRIM3-214ENST00000536344 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
TRIM3-214ENST00000536344 CABLES1Q8TDN4 633 aa26.92■■□□□ 1.9
TRIM3-214ENST00000536344 ARHGEF10O15013 1369 aa26.91■■□□□ 1.9
TRIM3-214ENST00000536344 RGPD1P0DJD0 1748 aa26.91■■□□□ 1.9
TRIM3-214ENST00000536344 RRP9O43818 475 aaKnown RBP26.91■■□□□ 1.9
TRIM3-214ENST00000536344 NBPF6Q5VWK0 638 aa26.91■■□□□ 1.9
TRIM3-214ENST00000536344 ATF7IPQ6VMQ6 1270 aa26.91■■□□□ 1.9
TRIM3-214ENST00000536344 NBPF4Q96M43 638 aa26.91■■□□□ 1.9
TRIM3-214ENST00000536344 NWD1Q149M9 1564 aa26.9■■□□□ 1.9
TRIM3-214ENST00000536344 CT47B1P0C2W7 299 aaPredicted RBP26.9■■□□□ 1.9
TRIM3-214ENST00000536344 TMEM57Q8N5G2 664 aa26.9■■□□□ 1.9
TRIM3-214ENST00000536344 RTF1Q92541 710 aaKnown RBP26.89■■□□□ 1.9
TRIM3-214ENST00000536344 BECN1Q14457 450 aa26.89■■□□□ 1.9
TRIM3-214ENST00000536344 MVPQ14764 893 aaKnown RBP26.89■■□□□ 1.9
TRIM3-214ENST00000536344 LTN1O94822 1766 aa26.89■■□□□ 1.89
TRIM3-214ENST00000536344 FSD2A1L4K1 749 aa26.88■■□□□ 1.89
TRIM3-214ENST00000536344 IP6K1Q92551 441 aa26.88■■□□□ 1.89
TRIM3-214ENST00000536344 AXIN2Q9Y2T1 843 aa26.87■■□□□ 1.89
TRIM3-214ENST00000536344 ZNF335Q9H4Z2 1342 aaPredicted RBP26.87■■□□□ 1.89
TRIM3-214ENST00000536344 TBC1D2Q9BYX2 928 aa26.85■■□□□ 1.89
TRIM3-214ENST00000536344 ERBB4Q15303 1308 aa26.85■■□□□ 1.89
TRIM3-214ENST00000536344 KDRP35968 1356 aa26.85■■□□□ 1.89
TRIM3-214ENST00000536344 MRPL50Q8N5N7 158 aaKnown RBP26.83■■□□□ 1.89
TRIM3-214ENST00000536344 KCNH5Q8NCM2 988 aa26.83■■□□□ 1.89
TRIM3-214ENST00000536344 NFAT5O94916 1531 aa26.82■■□□□ 1.88
TRIM3-214ENST00000536344 CHL1O00533 1208 aa26.82■■□□□ 1.88
TRIM3-214ENST00000536344 TSPYL4Q9UJ04 414 aa26.82■■□□□ 1.88
TRIM3-214ENST00000536344 MST1RQ04912 1400 aa26.82■■□□□ 1.88
TRIM3-214ENST00000536344 NECTIN2Q92692 538 aa26.81■■□□□ 1.88
TRIM3-214ENST00000536344 KIF16BQ96L93 1317 aa26.81■■□□□ 1.88
TRIM3-214ENST00000536344 ALDH1L2Q3SY69 923 aa26.81■■□□□ 1.88
TRIM3-214ENST00000536344 ARHGEF25Q86VW2 580 aa26.81■■□□□ 1.88
TRIM3-214ENST00000536344 LMTK3Q96Q04 1460 aa26.8■■□□□ 1.88
TRIM3-214ENST00000536344 RGPD2P0DJD1 1756 aa26.8■■□□□ 1.88
TRIM3-214ENST00000536344 MCM4P33991 863 aa26.8■■□□□ 1.88
TRIM3-214ENST00000536344 GAS2L2Q8NHY3 880 aa26.8■■□□□ 1.88
TRIM3-214ENST00000536344 C1orf115Q9H7X2 142 aa26.79■■□□□ 1.88
TRIM3-214ENST00000536344 IPO8O15397 1037 aaKnown RBP26.79■■□□□ 1.88
TRIM3-214ENST00000536344 CHRNA2Q15822 529 aa26.78■■□□□ 1.88
TRIM3-214ENST00000536344 IL17REQ8NFR9 667 aa26.78■■□□□ 1.88
TRIM3-214ENST00000536344 VIRMAQ69YN4 1812 aaKnown RBP26.78■■□□□ 1.88
TRIM3-214ENST00000536344 GNAT3A8MTJ3 354 aa26.78■■□□□ 1.88
TRIM3-214ENST00000536344 ANKRD24Q8TF21 1146 aa26.78■■□□□ 1.88
TRIM3-214ENST00000536344 CADPS2Q86UW7 1296 aa26.77■■□□□ 1.88
TRIM3-214ENST00000536344 CRB1P82279 1406 aa26.77■■□□□ 1.88
TRIM3-214ENST00000536344 MSH6P52701 1360 aa26.76■■□□□ 1.87
TRIM3-214ENST00000536344 LGR6Q9HBX8 967 aa26.74■■□□□ 1.87
TRIM3-214ENST00000536344 TRAK2O60296 914 aa26.74■■□□□ 1.87
TRIM3-214ENST00000536344 DDX19BQ9UMR2 479 aa26.74■■□□□ 1.87
TRIM3-214ENST00000536344 ESPNB1AK53 854 aa26.73■■□□□ 1.87
TRIM3-214ENST00000536344 KIF24Q5T7B8 1368 aa26.73■■□□□ 1.87
TRIM3-214ENST00000536344 STRCQ7RTU9 1775 aa26.73■■□□□ 1.87
TRIM3-214ENST00000536344 RTL1A6NKG5 1358 aa26.72■■□□□ 1.87
TRIM3-214ENST00000536344 USP54Q70EL1 1684 aa26.72■■□□□ 1.87
TRIM3-214ENST00000536344 TRPM3Q9HCF6 1732 aaPredicted RBP26.71■■□□□ 1.87
TRIM3-214ENST00000536344 MPRIPQ6WCQ1 1025 aa26.71■■□□□ 1.87
TRIM3-214ENST00000536344 TBC1D32Q96NH3 1257 aa26.71■■□□□ 1.87
TRIM3-214ENST00000536344 SLC4A2P04920 1241 aa26.69■■□□□ 1.86
TRIM3-214ENST00000536344 BRINP3Q76B58 766 aa26.69■■□□□ 1.86
TRIM3-214ENST00000536344 MAP3K5Q99683 1374 aa26.69■■□□□ 1.86
TRIM3-214ENST00000536344 ZNF530Q6P9A1 599 aaPredicted RBP26.68■■□□□ 1.86
TRIM3-214ENST00000536344 GRPEL1Q9HAV7 217 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 ZBTB40Q9NUA8 1239 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 RGPD5Q99666 1765 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 G2E3Q7L622 706 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 ZNF428Q96B54 188 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 NLRP2Q9NX02 1062 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 NPHP3Q7Z494 1330 aa26.68■■□□□ 1.86
TRIM3-214ENST00000536344 PDZRN3Q9UPQ7 1066 aa26.67■■□□□ 1.86
TRIM3-214ENST00000536344 RWDD1Q9H446 243 aaPredicted RBP26.67■■□□□ 1.86
TRIM3-214ENST00000536344 MRE11P49959 708 aa26.67■■□□□ 1.86
TRIM3-214ENST00000536344 MED1Q15648 1581 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms