RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 HOXC9P31274 260 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 GPR162Q16538 588 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 SLC27A3Q5K4L6 730 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 PUS7Q96PZ0 661 aaKnown RBP11.86□□□□□ -0.51
CLPB-207ENST00000536297 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
CLPB-207ENST00000536297 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
CLPB-207ENST00000536297 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
CLPB-207ENST00000536297 TESK2Q96S53 571 aa11.85□□□□□ -0.51
CLPB-207ENST00000536297 MEGF6O75095 1541 aa11.85□□□□□ -0.51
CLPB-207ENST00000536297 NSD2O96028 1365 aa11.84□□□□□ -0.51
CLPB-207ENST00000536297 LY75O60449 1722 aa11.84□□□□□ -0.51
CLPB-207ENST00000536297 POLD1P28340 1107 aa11.84□□□□□ -0.51
CLPB-207ENST00000536297 RRS1Q15050 365 aaKnown RBP11.84□□□□□ -0.51
CLPB-207ENST00000536297 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
CLPB-207ENST00000536297 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
CLPB-207ENST00000536297 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
CLPB-207ENST00000536297 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
CLPB-207ENST00000536297 MSH5O43196 834 aa11.83□□□□□ -0.52
CLPB-207ENST00000536297 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
CLPB-207ENST00000536297 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
CLPB-207ENST00000536297 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
CLPB-207ENST00000536297 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
CLPB-207ENST00000536297 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
CLPB-207ENST00000536297 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
CLPB-207ENST00000536297 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
CLPB-207ENST00000536297 FYB1O15117 783 aa11.8□□□□□ -0.52
CLPB-207ENST00000536297 C1QTNF8P60827 252 aa11.8□□□□□ -0.52
CLPB-207ENST00000536297 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
CLPB-207ENST00000536297 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
CLPB-207ENST00000536297 USP47Q96K76 1375 aa11.79□□□□□ -0.52
CLPB-207ENST00000536297 RAPGEF4Q8WZA2 1011 aa11.79□□□□□ -0.52
CLPB-207ENST00000536297 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
CLPB-207ENST00000536297 C5P01031 1676 aa11.78□□□□□ -0.52
CLPB-207ENST00000536297 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
CLPB-207ENST00000536297 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
CLPB-207ENST00000536297 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
CLPB-207ENST00000536297 UTRNP46939 3433 aa11.78□□□□□ -0.52
CLPB-207ENST00000536297 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLPB-207ENST00000536297 TMF1P82094 1093 aa11.77□□□□□ -0.53
CLPB-207ENST00000536297 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
CLPB-207ENST00000536297 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
CLPB-207ENST00000536297 MPRIPQ6WCQ1 1025 aa11.76□□□□□ -0.53
CLPB-207ENST00000536297 PCDH11XQ9BZA7 1347 aa11.76□□□□□ -0.53
CLPB-207ENST00000536297 PCDH11YQ9BZA8 1340 aa11.76□□□□□ -0.53
CLPB-207ENST00000536297 INSRP06213 1382 aa11.76□□□□□ -0.53
CLPB-207ENST00000536297 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
CLPB-207ENST00000536297 TAF1LQ8IZX4 1826 aa11.75□□□□□ -0.53
CLPB-207ENST00000536297 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
CLPB-207ENST00000536297 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
CLPB-207ENST00000536297 ITGB4P16144 1822 aa11.74□□□□□ -0.53
CLPB-207ENST00000536297 CYP27B1O15528 508 aa11.74□□□□□ -0.53
CLPB-207ENST00000536297 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
CLPB-207ENST00000536297 FLT4P35916 1363 aa11.74□□□□□ -0.53
CLPB-207ENST00000536297 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
CLPB-207ENST00000536297 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
CLPB-207ENST00000536297 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
CLPB-207ENST00000536297 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
CLPB-207ENST00000536297 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
CLPB-207ENST00000536297 PHF14O94880 888 aa11.72□□□□□ -0.53
CLPB-207ENST00000536297 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
CLPB-207ENST00000536297 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
CLPB-207ENST00000536297 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.53
CLPB-207ENST00000536297 PIGBQ92521 554 aa11.71□□□□□ -0.53
CLPB-207ENST00000536297 AK7Q96M32 723 aa11.71□□□□□ -0.53
CLPB-207ENST00000536297 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
CLPB-207ENST00000536297 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
CLPB-207ENST00000536297 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
CLPB-207ENST00000536297 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
CLPB-207ENST00000536297 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
CLPB-207ENST00000536297 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
CLPB-207ENST00000536297 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
CLPB-207ENST00000536297 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
CLPB-207ENST00000536297 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
CLPB-207ENST00000536297 MAP2P11137 1827 aaKnown RBP11.68□□□□□ -0.54
CLPB-207ENST00000536297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
CLPB-207ENST00000536297 LINC00116Q8NCU8 138 aa11.68□□□□□ -0.54
CLPB-207ENST00000536297 EYA1Q99502 592 aa11.68□□□□□ -0.54
CLPB-207ENST00000536297 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
CLPB-207ENST00000536297 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
CLPB-207ENST00000536297 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
CLPB-207ENST00000536297 LOC102724428A0A0B4J2F2 783 aa11.67□□□□□ -0.54
CLPB-207ENST00000536297 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
CLPB-207ENST00000536297 SIK1P57059 783 aa11.67□□□□□ -0.54
CLPB-207ENST00000536297 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
CLPB-207ENST00000536297 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
CLPB-207ENST00000536297 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
CLPB-207ENST00000536297 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
CLPB-207ENST00000536297 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
CLPB-207ENST00000536297 ITPK1Q13572 414 aa11.66□□□□□ -0.54
CLPB-207ENST00000536297 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
CLPB-207ENST00000536297 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
CLPB-207ENST00000536297 GNPATO15228 680 aa11.65□□□□□ -0.54
CLPB-207ENST00000536297 SSFA2P28290 1259 aa11.65□□□□□ -0.54
CLPB-207ENST00000536297 ATP6V1AP38606 617 aa11.65□□□□□ -0.54
CLPB-207ENST00000536297 TNNT2P45379 298 aaPredicted RBP11.65□□□□□ -0.54
CLPB-207ENST00000536297 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
CLPB-207ENST00000536297 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
CLPB-207ENST00000536297 GOLGB1Q14789 3259 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms