RNA–Protein interactions for RNA: ENST00000536087.1

SCNN1A-207, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-207ENST00000536087 PANK3Q9H999 370 aa11.92□□□□□ -0.5
SCNN1A-207ENST00000536087 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
SCNN1A-207ENST00000536087 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
SCNN1A-207ENST00000536087 KCNQ2O43526 872 aa11.91□□□□□ -0.5
SCNN1A-207ENST00000536087 DDX54Q8TDD1 881 aaKnown RBP11.91□□□□□ -0.5
SCNN1A-207ENST00000536087 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
SCNN1A-207ENST00000536087 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
SCNN1A-207ENST00000536087 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
SCNN1A-207ENST00000536087 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
SCNN1A-207ENST00000536087 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
SCNN1A-207ENST00000536087 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
SCNN1A-207ENST00000536087 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
SCNN1A-207ENST00000536087 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
SCNN1A-207ENST00000536087 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
SCNN1A-207ENST00000536087 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
SCNN1A-207ENST00000536087 POLKQ9UBT6 870 aa11.89□□□□□ -0.51
SCNN1A-207ENST00000536087 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
SCNN1A-207ENST00000536087 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
SCNN1A-207ENST00000536087 PROM2Q8N271 834 aa11.88□□□□□ -0.51
SCNN1A-207ENST00000536087 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
SCNN1A-207ENST00000536087 BTAF1O14981 1849 aa11.88□□□□□ -0.51
SCNN1A-207ENST00000536087 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
SCNN1A-207ENST00000536087 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
SCNN1A-207ENST00000536087 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
SCNN1A-207ENST00000536087 TNNT2P45379 298 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-207ENST00000536087 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-207ENST00000536087 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-207ENST00000536087 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
SCNN1A-207ENST00000536087 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
SCNN1A-207ENST00000536087 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
SCNN1A-207ENST00000536087 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
SCNN1A-207ENST00000536087 PRIM1P49642 420 aaKnown RBP11.84□□□□□ -0.51
SCNN1A-207ENST00000536087 EYA1Q99502 592 aa11.84□□□□□ -0.51
SCNN1A-207ENST00000536087 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
SCNN1A-207ENST00000536087 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
SCNN1A-207ENST00000536087 CASZ1Q86V15 1759 aa11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 EIF4A2Q14240 407 aaKnown RBP11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
SCNN1A-207ENST00000536087 SPON1Q9HCB6 807 aa11.82□□□□□ -0.52
SCNN1A-207ENST00000536087 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCNN1A-207ENST00000536087 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
SCNN1A-207ENST00000536087 CYP27B1O15528 508 aa11.81□□□□□ -0.52
SCNN1A-207ENST00000536087 LRRC4BQ9NT99 713 aa11.81□□□□□ -0.52
SCNN1A-207ENST00000536087 LY75O60449 1722 aa11.8□□□□□ -0.52
SCNN1A-207ENST00000536087 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
SCNN1A-207ENST00000536087 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
SCNN1A-207ENST00000536087 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
SCNN1A-207ENST00000536087 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
SCNN1A-207ENST00000536087 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
SCNN1A-207ENST00000536087 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
SCNN1A-207ENST00000536087 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
SCNN1A-207ENST00000536087 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
SCNN1A-207ENST00000536087 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 PHKG2P15735 406 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 MTFR1LQ9H019 292 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 PALLDQ8WX93 1383 aa11.77□□□□□ -0.53
SCNN1A-207ENST00000536087 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
SCNN1A-207ENST00000536087 QSER1Q2KHR3 1735 aa11.76□□□□□ -0.53
SCNN1A-207ENST00000536087 KDRP35968 1356 aa11.76□□□□□ -0.53
SCNN1A-207ENST00000536087 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 IL13P35225 146 aa11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 MTHFSP49914 203 aa11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
SCNN1A-207ENST00000536087 ITGB4P16144 1822 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 PTGER2P43116 358 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 KCNQ4P56696 695 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 SULT6B1Q6IMI4 303 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 AEBP1Q8IUX7 1158 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 PIGBQ92521 554 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 C5P01031 1676 aa11.74□□□□□ -0.53
SCNN1A-207ENST00000536087 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
SCNN1A-207ENST00000536087 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
SCNN1A-207ENST00000536087 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
SCNN1A-207ENST00000536087 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
SCNN1A-207ENST00000536087 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
SCNN1A-207ENST00000536087 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
SCNN1A-207ENST00000536087 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
SCNN1A-207ENST00000536087 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
SCNN1A-207ENST00000536087 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.53
SCNN1A-207ENST00000536087 DIAPH1O60610 1272 aaKnown RBP11.71□□□□□ -0.53
SCNN1A-207ENST00000536087 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
SCNN1A-207ENST00000536087 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 C4BP0C0L5 1744 aa11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 UTRNP46939 3433 aa11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 SIK1P57059 783 aa11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
SCNN1A-207ENST00000536087 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms