RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DIAPH1O60610 1272 aaKnown RBP24.15■■□□□ 1.46
DDX55-204ENST00000536079 SHANK3Q9BYB0 1731 aa24.15■■□□□ 1.46
DDX55-204ENST00000536079 SULT6B1Q6IMI4 303 aa24.14■■□□□ 1.45
DDX55-204ENST00000536079 DEFB132Q7Z7B7 95 aa24.14■■□□□ 1.45
DDX55-204ENST00000536079 BCL9O00512 1426 aa24.11■■□□□ 1.45
DDX55-204ENST00000536079 KCNQ2O43526 872 aa24.11■■□□□ 1.45
DDX55-204ENST00000536079 HMOX1P09601 288 aa24.11■■□□□ 1.45
DDX55-204ENST00000536079 CCDC125Q86Z20 511 aa24.11■■□□□ 1.45
DDX55-204ENST00000536079 ACSBG1Q96GR2 724 aa24.11■■□□□ 1.45
DDX55-204ENST00000536079 CYP27B1O15528 508 aa24.1■■□□□ 1.45
DDX55-204ENST00000536079 RALBP1Q15311 655 aa24.1■■□□□ 1.45
DDX55-204ENST00000536079 KDRP35968 1356 aa24.09■■□□□ 1.45
DDX55-204ENST00000536079 TNS1Q9HBL0 1735 aaKnown RBP24.08■■□□□ 1.45
DDX55-204ENST00000536079 PRKRIP1Q9H875 184 aaPredicted RBP24.07■■□□□ 1.44
DDX55-204ENST00000536079 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
DDX55-204ENST00000536079 SBF2Q86WG5 1849 aa24.06■■□□□ 1.44
DDX55-204ENST00000536079 U2SURPO15042 1029 aaKnown RBP24.06■■□□□ 1.44
DDX55-204ENST00000536079 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
DDX55-204ENST00000536079 APBA3O96018 575 aa24.05■■□□□ 1.44
DDX55-204ENST00000536079 EN1Q05925 392 aaPredicted RBP24.05■■□□□ 1.44
DDX55-204ENST00000536079 SF3B2Q13435 895 aaKnown RBP24.05■■□□□ 1.44
DDX55-204ENST00000536079 PCDH11XQ9BZA7 1347 aa24.05■■□□□ 1.44
DDX55-204ENST00000536079 PCDH11YQ9BZA8 1340 aa24.05■■□□□ 1.44
DDX55-204ENST00000536079 BCL11BQ9C0K0 894 aaPredicted RBP24.04■■□□□ 1.44
DDX55-204ENST00000536079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.04■■□□□ 1.442e-11■□□□□ 9.2
DDX55-204ENST00000536079 SPG7Q9UQ90 795 aa24.04■■□□□ 1.44
DDX55-204ENST00000536079 MYBBP1AQ9BQG0 1328 aaKnown RBP24.03■■□□□ 1.44
DDX55-204ENST00000536079 PHKG2P15735 406 aa24.02■■□□□ 1.44
DDX55-204ENST00000536079 PRIM1P49642 420 aaKnown RBP24.01■■□□□ 1.43
DDX55-204ENST00000536079 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
DDX55-204ENST00000536079 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
DDX55-204ENST00000536079 BAG6P46379 1132 aa24■■□□□ 1.43
DDX55-204ENST00000536079 NKX1-1Q15270 411 aaPredicted RBP24■■□□□ 1.43
DDX55-204ENST00000536079 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
DDX55-204ENST00000536079 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
DDX55-204ENST00000536079 NHSQ6T4R5 1651 aa23.99■■□□□ 1.43
DDX55-204ENST00000536079 U2AF1L5P0DN76 240 aaPredicted RBP23.98■■□□□ 1.43
DDX55-204ENST00000536079 U2AF1Q01081 240 aaKnown RBP eCLIP23.98■■□□□ 1.43
DDX55-204ENST00000536079 ZNF530Q6P9A1 599 aaPredicted RBP23.98■■□□□ 1.43
DDX55-204ENST00000536079 AMOTQ4VCS5 1084 aa23.97■■□□□ 1.43
DDX55-204ENST00000536079 IFNL2Q8IZJ0 200 aa23.97■■□□□ 1.43
DDX55-204ENST00000536079 DOT1LQ8TEK3 1739 aa23.97■■□□□ 1.43
DDX55-204ENST00000536079 PLEKHG2Q9H7P9 1386 aa23.97■■□□□ 1.43
DDX55-204ENST00000536079 NUDCQ9Y266 331 aa23.97■■□□□ 1.43
DDX55-204ENST00000536079 MTHFSDQ2M296 383 aaKnown RBP23.96■■□□□ 1.43
DDX55-204ENST00000536079 SYTL4Q96C24 671 aaPredicted RBP23.96■■□□□ 1.43
DDX55-204ENST00000536079 PHACTR3Q96KR7 559 aa23.96■■□□□ 1.43
DDX55-204ENST00000536079 TOGARAM1Q9Y4F4 1720 aa23.96■■□□□ 1.43
DDX55-204ENST00000536079 PRKAR2BP31323 418 aa23.95■■□□□ 1.42
DDX55-204ENST00000536079 PROM2Q8N271 834 aa23.95■■□□□ 1.42
DDX55-204ENST00000536079 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
DDX55-204ENST00000536079 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
DDX55-204ENST00000536079 PLSCR1O15162 318 aa23.92■■□□□ 1.42
DDX55-204ENST00000536079 BTAF1O14981 1849 aa23.91■■□□□ 1.42
DDX55-204ENST00000536079 FCHSD2O94868 740 aa23.9■■□□□ 1.42
DDX55-204ENST00000536079 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
DDX55-204ENST00000536079 PIGBQ92521 554 aa23.89■■□□□ 1.41
DDX55-204ENST00000536079 LGR6Q9HBX8 967 aa23.89■■□□□ 1.41
DDX55-204ENST00000536079 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
DDX55-204ENST00000536079 AKAP4Q5JQC9 854 aa23.88■■□□□ 1.41
DDX55-204ENST00000536079 C1orf141Q5JVX7 400 aa23.88■■□□□ 1.41
DDX55-204ENST00000536079 DCAF5Q96JK2 942 aa23.87■■□□□ 1.41
DDX55-204ENST00000536079 PLEKHF1Q96S99 279 aa23.87■■□□□ 1.41
DDX55-204ENST00000536079 ANP32CO43423 234 aa23.86■■□□□ 1.41
DDX55-204ENST00000536079 TXNRD1Q16881 649 aa23.86■■□□□ 1.41
DDX55-204ENST00000536079 RREB1Q92766 1687 aa23.86■■□□□ 1.41
DDX55-204ENST00000536079 KCNQ4P56696 695 aa23.85■■□□□ 1.41
DDX55-204ENST00000536079 ITGB4P16144 1822 aa23.84■■□□□ 1.41
DDX55-204ENST00000536079 HSP90AB1P08238 724 aaKnown RBP23.84■■□□□ 1.41
DDX55-204ENST00000536079 LRRC4BQ9NT99 713 aa23.84■■□□□ 1.41
DDX55-204ENST00000536079 ERVV-2B6SEH9 535 aa23.83■■□□□ 1.41
DDX55-204ENST00000536079 RNMTO43148 476 aaKnown RBP23.83■■□□□ 1.41
DDX55-204ENST00000536079 TMOD3Q9NYL9 352 aa23.83■■□□□ 1.41
DDX55-204ENST00000536079 NUP188Q5SRE5 1749 aa23.82■■□□□ 1.4
DDX55-204ENST00000536079 GAS2L2Q8NHY3 880 aa23.82■■□□□ 1.4
DDX55-204ENST00000536079 ASAP1Q9ULH1 1129 aa23.82■■□□□ 1.4
DDX55-204ENST00000536079 ADAMTS8Q9UP79 889 aa23.82■■□□□ 1.4
DDX55-204ENST00000536079 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
DDX55-204ENST00000536079 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
DDX55-204ENST00000536079 IL17REQ8NFR9 667 aa23.81■■□□□ 1.4
DDX55-204ENST00000536079 ANO8Q9HCE9 1232 aaPredicted RBP23.81■■□□□ 1.4
DDX55-204ENST00000536079 CABP4P57796 275 aa23.8■■□□□ 1.4
DDX55-204ENST00000536079 NFATC2IPQ8NCF5 419 aa23.8■■□□□ 1.4
DDX55-204ENST00000536079 ATG3Q9NT62 314 aa23.8■■□□□ 1.4
DDX55-204ENST00000536079 MAP3K5Q99683 1374 aa23.79■■□□□ 1.4
DDX55-204ENST00000536079 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
DDX55-204ENST00000536079 PALLDQ8WX93 1383 aa23.78■■□□□ 1.4
DDX55-204ENST00000536079 PSDA5PKW4 1024 aaPredicted RBP23.78■■□□□ 1.4
DDX55-204ENST00000536079 GNAT3A8MTJ3 354 aa23.78■■□□□ 1.4
DDX55-204ENST00000536079 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.4
DDX55-204ENST00000536079 SLC52A2Q9HAB3 445 aa23.77■■□□□ 1.4
DDX55-204ENST00000536079 SCN11AQ9UI33 1791 aa23.77■■□□□ 1.4
DDX55-204ENST00000536079 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
DDX55-204ENST00000536079 DCTN1Q14203 1278 aa23.75■■□□□ 1.39
DDX55-204ENST00000536079 R3HDM1Q15032 1099 aaKnown RBP23.75■■□□□ 1.39
DDX55-204ENST00000536079 LY75O60449 1722 aa23.75■■□□□ 1.39
DDX55-204ENST00000536079 MCM10Q7L590 875 aa23.74■■□□□ 1.39
DDX55-204ENST00000536079 SLC4A9Q96Q91 983 aa23.74■■□□□ 1.39
DDX55-204ENST00000536079 CCNL1Q9UK58 526 aaPredicted RBP23.74■■□□□ 1.39
DDX55-204ENST00000536079 MRC1P22897 1456 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms