RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-209ENST00000535954 FLT4P35916 1363 aa12.27□□□□□ -0.45
C2CD3-209ENST00000535954 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-209ENST00000535954 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
C2CD3-209ENST00000535954 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
C2CD3-209ENST00000535954 PDGFDQ9GZP0 370 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-209ENST00000535954 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
C2CD3-209ENST00000535954 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
C2CD3-209ENST00000535954 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
C2CD3-209ENST00000535954 NSD2O96028 1365 aa12.25□□□□□ -0.45
C2CD3-209ENST00000535954 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
C2CD3-209ENST00000535954 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
C2CD3-209ENST00000535954 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
C2CD3-209ENST00000535954 EYA1Q99502 592 aa12.24□□□□□ -0.45
C2CD3-209ENST00000535954 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
C2CD3-209ENST00000535954 CYP27B1O15528 508 aa12.23□□□□□ -0.45
C2CD3-209ENST00000535954 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
C2CD3-209ENST00000535954 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
C2CD3-209ENST00000535954 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
C2CD3-209ENST00000535954 DOT1LQ8TEK3 1739 aa12.21□□□□□ -0.45
C2CD3-209ENST00000535954 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
C2CD3-209ENST00000535954 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
C2CD3-209ENST00000535954 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
C2CD3-209ENST00000535954 LY75O60449 1722 aa12.2□□□□□ -0.46
C2CD3-209ENST00000535954 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
C2CD3-209ENST00000535954 PPM1GO15355 546 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-209ENST00000535954 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-209ENST00000535954 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-209ENST00000535954 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-209ENST00000535954 ITGB4P16144 1822 aa12.19□□□□□ -0.46
C2CD3-209ENST00000535954 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
C2CD3-209ENST00000535954 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
C2CD3-209ENST00000535954 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
C2CD3-209ENST00000535954 KCNQ4P56696 695 aa12.18□□□□□ -0.46
C2CD3-209ENST00000535954 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
C2CD3-209ENST00000535954 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
C2CD3-209ENST00000535954 PTGER2P43116 358 aa12.17□□□□□ -0.46
C2CD3-209ENST00000535954 MORC1Q86VD1 984 aa12.17□□□□□ -0.46
C2CD3-209ENST00000535954 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
C2CD3-209ENST00000535954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
C2CD3-209ENST00000535954 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
C2CD3-209ENST00000535954 KNSTRNQ9Y448 316 aa12.16□□□□□ -0.46
C2CD3-209ENST00000535954 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
C2CD3-209ENST00000535954 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 IL13P35225 146 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
C2CD3-209ENST00000535954 SPON1Q9HCB6 807 aa12.15□□□□□ -0.46
C2CD3-209ENST00000535954 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
C2CD3-209ENST00000535954 PIGBQ92521 554 aa12.14□□□□□ -0.47
C2CD3-209ENST00000535954 TAF1LQ8IZX4 1826 aa12.14□□□□□ -0.47
C2CD3-209ENST00000535954 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
C2CD3-209ENST00000535954 PHKG2P15735 406 aa12.13□□□□□ -0.47
C2CD3-209ENST00000535954 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
C2CD3-209ENST00000535954 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
C2CD3-209ENST00000535954 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
C2CD3-209ENST00000535954 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
C2CD3-209ENST00000535954 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
C2CD3-209ENST00000535954 UTRNP46939 3433 aa12.12□□□□□ -0.47
C2CD3-209ENST00000535954 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
C2CD3-209ENST00000535954 KDRP35968 1356 aa12.11□□□□□ -0.47
C2CD3-209ENST00000535954 NPC1L1Q9UHC9 1359 aa12.11□□□□□ -0.47
C2CD3-209ENST00000535954 MTHFSP49914 203 aa12.11□□□□□ -0.47
C2CD3-209ENST00000535954 IFNL2Q8IZJ0 200 aa12.11□□□□□ -0.47
C2CD3-209ENST00000535954 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
C2CD3-209ENST00000535954 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
C2CD3-209ENST00000535954 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
C2CD3-209ENST00000535954 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
C2CD3-209ENST00000535954 ASAP1Q9ULH1 1129 aa12.09□□□□□ -0.47
C2CD3-209ENST00000535954 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
C2CD3-209ENST00000535954 C5P01031 1676 aa12.08□□□□□ -0.48
C2CD3-209ENST00000535954 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
C2CD3-209ENST00000535954 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
C2CD3-209ENST00000535954 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
C2CD3-209ENST00000535954 ATG3Q9NT62 314 aa12.08□□□□□ -0.48
C2CD3-209ENST00000535954 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-209ENST00000535954 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-209ENST00000535954 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
C2CD3-209ENST00000535954 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-209ENST00000535954 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 ITPK1Q13572 414 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 SMIM5Q71RC9 77 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
C2CD3-209ENST00000535954 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
C2CD3-209ENST00000535954 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
C2CD3-209ENST00000535954 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
C2CD3-209ENST00000535954 GOLGB1Q14789 3259 aaKnown RBP12.05□□□□□ -0.48
C2CD3-209ENST00000535954 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
C2CD3-209ENST00000535954 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
C2CD3-209ENST00000535954 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
C2CD3-209ENST00000535954 SIK1P57059 783 aa12.04□□□□□ -0.48
C2CD3-209ENST00000535954 FHDC1Q9C0D6 1143 aaPredicted RBP12.04□□□□□ -0.48
C2CD3-209ENST00000535954 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
C2CD3-209ENST00000535954 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
C2CD3-209ENST00000535954 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms