RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
LPCAT3-203ENST00000535479 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
LPCAT3-203ENST00000535479 IL25Q9H293 177 aa17.11■□□□□ 0.33
LPCAT3-203ENST00000535479 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 LMBRD1Q9NUN5 540 aa17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 TSC1Q92574 1164 aa17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 ANO2Q9NQ90 1003 aa17.1■□□□□ 0.33
LPCAT3-203ENST00000535479 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 CPA1P15085 419 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 TMEM63CQ9P1W3 806 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
LPCAT3-203ENST00000535479 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.33
LPCAT3-203ENST00000535479 PLCB2Q00722 1185 aa17.08■□□□□ 0.33
LPCAT3-203ENST00000535479 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 ANXA1P04083 346 aa17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 SLC26A8Q96RN1 970 aa17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
LPCAT3-203ENST00000535479 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 METP08581 1390 aa17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 MAP2P11137 1827 aaKnown RBP17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
LPCAT3-203ENST00000535479 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
LPCAT3-203ENST00000535479 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 RABEP1Q15276 862 aa17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
LPCAT3-203ENST00000535479 CPS1P31327 1500 aa17.04■□□□□ 0.32
LPCAT3-203ENST00000535479 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
LPCAT3-203ENST00000535479 MED14O60244 1454 aa17.04■□□□□ 0.32
LPCAT3-203ENST00000535479 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 ZMYND15Q9H091 742 aa17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
LPCAT3-203ENST00000535479 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 PTCH1Q13635 1447 aa17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 PDE1AP54750 535 aa17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
LPCAT3-203ENST00000535479 ST18O60284 1047 aa17.02■□□□□ 0.31
LPCAT3-203ENST00000535479 OSCARQ8IYS5 282 aa17.02■□□□□ 0.31
LPCAT3-203ENST00000535479 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.31
LPCAT3-203ENST00000535479 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
LPCAT3-203ENST00000535479 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
LPCAT3-203ENST00000535479 ARHGEF40Q8TER5 1519 aa17.01■□□□□ 0.31
LPCAT3-203ENST00000535479 ATP10DQ9P241 1426 aa17■□□□□ 0.31
LPCAT3-203ENST00000535479 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
LPCAT3-203ENST00000535479 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
LPCAT3-203ENST00000535479 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
LPCAT3-203ENST00000535479 ERC2O15083 957 aa17■□□□□ 0.31
LPCAT3-203ENST00000535479 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
LPCAT3-203ENST00000535479 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
LPCAT3-203ENST00000535479 ACEP12821 1306 aa16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 USP32Q8NFA0 1604 aa16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
LPCAT3-203ENST00000535479 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
LPCAT3-203ENST00000535479 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
LPCAT3-203ENST00000535479 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
LPCAT3-203ENST00000535479 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 COL9A3Q14050 684 aaPredicted RBP16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 CHL1O00533 1208 aa16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 RGS12O14924 1447 aa16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 NUCB2P80303 420 aa16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
LPCAT3-203ENST00000535479 CYP2E1P05181 493 aaPredicted RBP16.96■□□□□ 0.3
LPCAT3-203ENST00000535479 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.3
LPCAT3-203ENST00000535479 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.3
LPCAT3-203ENST00000535479 AMPHP49418 695 aa16.95■□□□□ 0.3
LPCAT3-203ENST00000535479 PIK3R4Q99570 1358 aa16.95■□□□□ 0.3
LPCAT3-203ENST00000535479 DLG5Q8TDM6 1919 aa16.95■□□□□ 0.3
LPCAT3-203ENST00000535479 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 REC8O95072 547 aa16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 MX1P20591 662 aa16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
LPCAT3-203ENST00000535479 CNPY2Q9Y2B0 182 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms